Conservation of cofitness between BPHYT_RS14845 and BPHYT_RS16840 in Burkholderia phytofirmans PsJN

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14845 cysteine synthase 1.0 BPHYT_RS16840 transketolase 0.79 2
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_03911 cysteine synthase 0.95 H281DRAFT_06314 transketolase — —
Paraburkholderia graminis OAS925 0.94 ABIE53_003144 cysteine synthase B 0.95 ABIE53_003537 transketolase — —
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04135 cysteine synthase CysM 0.90 QEN71_RS27010 transketolase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS04560 cysteine synthase CysM 0.68 RS_RS13760 transketolase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13825 cysteine synthase CysM 0.68 RALBFv3_RS05870 transketolase — —
Ralstonia solanacearum UW163 0.82 UW163_RS15985 cysteine synthase CysM 0.68 UW163_RS07755 transketolase — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09515 cysteine synthase CysM 0.69 ABZR87_RS01440 transketolase — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS19645 cysteine synthase CysM 0.68 RPSI07_RS11430 transketolase — —
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS04915 cysteine synthase 0.71 HSERO_RS07115 transketolase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04535 cysteine synthase 0.69 RR42_RS17575 transketolase — —
Dechlorosoma suillum PS 0.79 Dsui_1954 cysteine synthase B 0.63 Dsui_1561 transketolase — —
Variovorax sp. SCN45 0.75 GFF6025 Cysteine synthase B (EC 2.5.1.47) 0.60 GFF7176 Transketolase (EC 2.2.1.1) — —
Variovorax sp. OAS795 0.74 ABID97_RS07880 cysteine synthase CysM 0.59 ABID97_RS02445 transketolase — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_644 Cysteine synthase B (EC 2.5.1.47) 0.63 Ac3H11_649 Transketolase (EC 2.2.1.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF709 Cysteine synthase B (EC 2.5.1.47) 0.62 GFF2487 Transketolase (EC 2.2.1.1) — —
Marinobacter adhaerens HP15 0.69 HP15_789 cysteine synthase B 0.61 HP15_2913 bacterial transketolase — —
Pseudomonas putida KT2440 0.68 PP_1654 cysteine synthase B 0.63 PP_4965 transketolase A — —
Pseudomonas simiae WCS417 0.68 PS417_20160 cysteine synthase 0.62 PS417_26440 transketolase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_02720 cysteine synthase 0.62 AO353_07955 transketolase — —
Pseudomonas stutzeri RCH2 0.67 Psest_1638 cysteine synthase B 0.65 Psest_0328 transketolase, bacterial and yeast — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.59 PfGW456L13_1064 Transketolase (EC 2.2.1.1) — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_19050 cysteine synthase 0.62 AO356_13680 transketolase — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) 0.62 Pf1N1B4_2397 Transketolase (EC 2.2.1.1) — —
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) 0.62 Pf6N2E2_4655 Transketolase (EC 2.2.1.1) — —
Pseudomonas sp. RS175 0.67 PFR28_03225 Cysteine synthase B 0.62 PFR28_04188 Transketolase 1 — —
Pseudomonas sp. S08-1 0.67 OH686_18950 cysteine synthase B 0.63 OH686_10770 transketolase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS22105 cysteine synthase CysM 0.63 PFLU_RS28095 transketolase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS22105 cysteine synthase CysM 0.63 PFLU_RS28095 transketolase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3697 cysteine synthase 0.63 Psyr_4792 transketolase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3697 cysteine synthase 0.63 Psyr_4792 transketolase — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS07055 cysteine synthase CysM 0.66 ABCV34_RS15450 transketolase — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_02845 cysteine synthase CysM 0.65 CSW01_17330 transketolase low > 62
Acinetobacter radioresistens SK82 0.61 MPMX26_00536 Cysteine synthase B 0.60 MPMX26_01775 Transketolase 1 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2055 Cysteine synthase (EC 2.5.1.47) 0.64 GFF3028 Transketolase (EC 2.2.1.1) low > 78
Klebsiella michiganensis M5al 0.61 BWI76_RS20685 cysteine synthase B 0.64 BWI76_RS24015 transketolase — —
Rahnella sp. WP5 0.60 EX31_RS20205 cysteine synthase CysM 0.63 EX31_RS20285 transketolase low > 89
Escherichia coli ECOR38 0.60 HEPCGN_21345 cysM cysteine synthase B 0.65 HEPCGN_18630 tkt transketolase low > 87
Escherichia coli BW25113 0.60 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) 0.65 b2935 tktA transketolase 1, thiamin-binding (NCBI) low > 76
Escherichia fergusonii Becca 0.60 EFB2_01456 Cysteine synthase B 0.65 EFB2_00966 Transketolase 1 low > 86
Escherichia coli Nissle 1917 0.60 ECOLIN_RS13900 cysteine synthase B 0.65 ECOLIN_RS16330 transketolase — —
Enterobacter sp. TBS_079 0.60 MPMX20_03313 Cysteine synthase B 0.64 MPMX20_03780 Transketolase 1 — —
Escherichia coli ECRC62 0.60 BNILDI_12715 cysM cysteine synthase B 0.65 BNILDI_09775 tkt transketolase low > 75
Escherichia coli ECOR27 0.60 NOLOHH_13850 cysM cysteine synthase B 0.65 NOLOHH_11230 tkt transketolase low > 75
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0209 cysteine synthase B 0.63 EX28DRAFT_2974 transketolase, bacterial and yeast — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01302 Cysteine synthase B 0.65 OHPLBJKB_00781 Transketolase 1 — —
Escherichia coli BL21 0.60 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) 0.65 ECD_02765 transketolase 1, thiamine triphosphate-binding low > 61
Dickeya dadantii 3937 0.60 DDA3937_RS04425 cysteine synthase CysM 0.64 DDA3937_RS18525 transketolase — —
Dickeya dianthicola ME23 0.59 DZA65_RS04315 cysteine synthase CysM 0.63 DZA65_RS19585 transketolase — —
Shewanella sp. ANA-3 0.59 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.64 Shewana3_3353 transketolase (RefSeq) — —
Escherichia coli ECRC101 0.59 MCAODC_12700 cysM cysteine synthase B 0.65 MCAODC_09845 tkt transketolase low > 87
Escherichia coli ECRC100 0.59 OKFHMN_22170 cysM cysteine synthase B 0.65 OKFHMN_19325 tkt transketolase — —
Escherichia coli ECRC99 0.59 KEDOAH_06050 cysM cysteine synthase B 0.65 KEDOAH_08815 tkt transketolase — —
Escherichia coli ECRC102 0.59 NIAGMN_19940 cysM cysteine synthase B 0.65 NIAGMN_17090 tkt transketolase — —
Escherichia coli ECRC98 0.59 JDDGAC_26120 cysM cysteine synthase B 0.65 JDDGAC_22955 tkt transketolase low > 86
Shewanella oneidensis MR-1 0.59 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.64 SO0930 tkt transketolase (NCBI ptt file) — —
Dickeya dianthicola 67-19 0.59 HGI48_RS04400 cysteine synthase CysM 0.63 HGI48_RS18450 transketolase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS17210 cysteine synthase CysM 0.63 HER17_RS02680 transketolase 0.86 21
Erwinia tracheiphila SCR3 0.55 LU632_RS06675 cysM cysteine synthase CysM 0.63 LU632_RS05520 tkt transketolase low > 74
Serratia liquefaciens MT49 0.55 IAI46_18490 cysteine synthase CysM 0.63 IAI46_21045 transketolase — —
Pantoea sp. MT58 0.54 IAI47_05405 cysteine synthase CysM 0.64 IAI47_03680 transketolase low > 76
Bacteroides thetaiotaomicron VPI-5482 0.40 BT1852 cysteine synthase A (NCBI ptt file) 0.30 BT0347 transketolase (NCBI ptt file) — —
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU0663 cysK cysteine synthase A (TIGR) 0.57 DVU2530 tkt transketolase (TIGR) — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS08075 cysteine synthase A 0.27 HMPREF1078_RS08725 transketolase — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04596 cysteine synthase A 0.29 BACOVA_01706 Transketolase, thiamine diphosphate binding domain protein — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS14120 cysteine synthase A 0.28 HMPREF1181_RS04450 transketolase — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.59 Xcc-8004.1180.1 Transketolase (EC 2.2.1.1) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS10255 cysteine synthase A 0.43 A4249_RS00780 transketolase — —
Lysobacter sp. OAE881 0.35 ABIE51_RS16995 cysteine synthase A 0.61 ABIE51_RS17120 transketolase — —
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_B2664 srpG cysteine synthase 0.47 Synpcc7942_0538 tktA transketolase — —
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00905 cysteine synthase A 0.62 LRK54_RS05750 transketolase — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00680 cysteine synthase A 0.61 LRK55_RS05505 transketolase low > 63
Rhodospirillum rubrum S1H 0.34 Rru_A3794 Cysteine synthase (NCBI) 0.54 Rru_A2405 transketolase (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_2658 cysteine synthase (RefSeq) 0.57 DvMF_0976 transketolase (RefSeq) — —
Sinorhizobium meliloti 1021 0.33 SMc00421 O-acetylserine sulfhydrylase A 0.51 SMc02342 transketolase low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS01415 cysteine synthase A 0.44 ABIE40_RS15865 transketolase — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1208 cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-) 0.62 B158DRAFT_0510 transketolase, bacterial and yeast — —
Alteromonas macleodii MIT1002 0.31 MIT1002_02237 Cysteine synthase A 0.64 MIT1002_00861 Transketolase 1 — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS01080 cysteine synthase 0.47 AZOBR_RS09010 transketolase — —
Agrobacterium fabrum C58 0.31 Atu0312 cysteine synthase 0.44 Atu3736 transketolase — —
Shewanella loihica PV-4 0.31 Shew_2382 cysteine synthase A (RefSeq) 0.64 Shew_0752 transketolase (RefSeq) — —
Shewanella amazonensis SB2B 0.30 Sama_1508 cysteine synthase A (RefSeq) 0.63 Sama_2759 transketolase (RefSeq) — —
Azospirillum sp. SherDot2 0.30 MPMX19_00237 Cysteine synthase 0.58 MPMX19_02942 Transketolase 1 low > 112
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3644 cysteine synthase A 0.46 Ga0059261_0731 transketolase, bacterial and yeast — —

Not shown: 15 genomes with orthologs for BPHYT_RS14845 only; 3 genomes with orthologs for BPHYT_RS16840 only