Conservation of cofitness between BPHYT_RS14845 and BPHYT_RS08960 in Burkholderia phytofirmans PsJN

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14845 cysteine synthase 1.0 BPHYT_RS08960 threonine synthase 0.77 5
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_03911 cysteine synthase 0.96 H281DRAFT_00811 L-threonine synthase — —
Paraburkholderia graminis OAS925 0.94 ABIE53_003144 cysteine synthase B 0.96 ABIE53_002027 threonine synthase — —
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04135 cysteine synthase CysM 0.92 QEN71_RS22400 threonine synthase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS04560 cysteine synthase CysM 0.76 RS_RS06660 threonine synthase — —
Ralstonia solanacearum UW163 0.82 UW163_RS15985 cysteine synthase CysM 0.75 UW163_RS13325 threonine synthase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13825 cysteine synthase CysM 0.75 RALBFv3_RS15880 threonine synthase — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09515 cysteine synthase CysM 0.76 ABZR87_RS11450 threonine synthase — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS19645 cysteine synthase CysM 0.75 RPSI07_RS17485 threonine synthase — —
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS04915 cysteine synthase 0.72 HSERO_RS10470 threonine synthase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04535 cysteine synthase 0.76 RR42_RS12535 threonine synthase — —
Dechlorosoma suillum PS 0.79 Dsui_1954 cysteine synthase B 0.66 Dsui_2904 threonine synthase — —
Variovorax sp. SCN45 0.75 GFF6025 Cysteine synthase B (EC 2.5.1.47) 0.64 GFF2800 Threonine synthase (EC 4.2.3.1) — —
Variovorax sp. OAS795 0.74 ABID97_RS07880 cysteine synthase CysM 0.65 ABID97_RS25760 threonine synthase — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_644 Cysteine synthase B (EC 2.5.1.47) 0.64 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF709 Cysteine synthase B (EC 2.5.1.47) 0.63 GFF3936 Threonine synthase (EC 4.2.3.1) — —
Marinobacter adhaerens HP15 0.69 HP15_789 cysteine synthase B 0.33 HP15_765 threonine synthase — —
Pseudomonas putida KT2440 0.68 PP_1654 cysteine synthase B 0.34 PP_1471 Threonine synthase — —
Pseudomonas simiae WCS417 0.68 PS417_20160 cysteine synthase 0.34 PS417_22880 threonine synthase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_02720 cysteine synthase 0.35 AO353_04350 threonine synthase — —
Pseudomonas stutzeri RCH2 0.67 Psest_1638 cysteine synthase B 0.33 Psest_3125 threonine synthase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_19050 cysteine synthase 0.35 AO356_06370 threonine synthase — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.34 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) 0.35 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas sp. RS175 0.67 PFR28_03225 Cysteine synthase B 0.35 PFR28_00334 Threonine synthase — —
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) 0.35 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas sp. S08-1 0.67 OH686_18950 cysteine synthase B 0.33 OH686_17765 threonine synthase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS22105 cysteine synthase CysM 0.34 PFLU_RS24545 threonine synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS22105 cysteine synthase CysM 0.34 PFLU_RS24545 threonine synthase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3697 cysteine synthase 0.34 Psyr_1291 L-threonine synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3697 cysteine synthase 0.34 Psyr_1291 L-threonine synthase — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS07055 cysteine synthase CysM 0.53 ABCV34_RS02300 threonine synthase — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_02845 cysteine synthase CysM 0.19 CSW01_11965 threonine synthase low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2055 Cysteine synthase (EC 2.5.1.47) 0.18 GFF1080 Threonine synthase (EC 4.2.3.1) low > 78
Klebsiella michiganensis M5al 0.61 BWI76_RS20685 cysteine synthase B 0.19 BWI76_RS04255 threonine synthase — —
Rahnella sp. WP5 0.60 EX31_RS20205 cysteine synthase CysM 0.20 EX31_RS03935 threonine synthase 0.66 37
Escherichia fergusonii Becca 0.60 EFB2_01456 Cysteine synthase B 0.18 EFB2_04039 Threonine synthase low > 86
Escherichia coli ECOR38 0.60 HEPCGN_21345 cysM cysteine synthase B 0.18 HEPCGN_09105 thrC threonine synthase low > 87
Escherichia coli Nissle 1917 0.60 ECOLIN_RS13900 cysteine synthase B 0.18 ECOLIN_RS00020 threonine synthase — —
Escherichia coli BW25113 0.60 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) 0.18 b0004 thrC threonine synthase (NCBI) low > 76
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0209 cysteine synthase B 0.18 EX28DRAFT_3616 threonine synthase — —
Escherichia coli ECOR27 0.60 NOLOHH_13850 cysM cysteine synthase B 0.18 NOLOHH_03430 thrC threonine synthase low > 75
Escherichia coli ECRC62 0.60 BNILDI_12715 cysM cysteine synthase B 0.18 BNILDI_08170 thrC threonine synthase low > 75
Enterobacter sp. TBS_079 0.60 MPMX20_03313 Cysteine synthase B 0.18 MPMX20_00712 Threonine synthase — —
Escherichia coli BL21 0.60 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) 0.18 ECD_00004 L-threonine synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01302 Cysteine synthase B 0.18 OHPLBJKB_03656 Threonine synthase low > 73
Dickeya dadantii 3937 0.60 DDA3937_RS04425 cysteine synthase CysM 0.18 DDA3937_RS18405 threonine synthase low > 74
Dickeya dianthicola ME23 0.59 DZA65_RS04315 cysteine synthase CysM 0.17 DZA65_RS19475 threonine synthase low > 75
Shewanella sp. ANA-3 0.59 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.16 Shewana3_1141 threonine synthase (RefSeq) low > 73
Escherichia coli ECRC101 0.59 MCAODC_12700 cysM cysteine synthase B 0.18 MCAODC_01615 thrC threonine synthase low > 87
Escherichia coli ECRC102 0.59 NIAGMN_19940 cysM cysteine synthase B 0.18 NIAGMN_08950 thrC threonine synthase — —
Escherichia coli ECRC100 0.59 OKFHMN_22170 cysM cysteine synthase B 0.18 OKFHMN_11100 thrC threonine synthase 0.59 60
Escherichia coli ECRC98 0.59 JDDGAC_26120 cysM cysteine synthase B 0.18 JDDGAC_14695 thrC threonine synthase low > 86
Escherichia coli ECRC99 0.59 KEDOAH_06050 cysM cysteine synthase B 0.18 KEDOAH_17055 thrC threonine synthase — —
Shewanella oneidensis MR-1 0.59 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.15 SO3413 thrC threonine synthase (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS04400 cysteine synthase CysM 0.18 HGI48_RS18335 threonine synthase low > 71
Pectobacterium carotovorum WPP14 0.57 HER17_RS17210 cysteine synthase CysM 0.18 HER17_RS02805 threonine synthase low > 75
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_0220 cysteine synthase B 0.19 Echvi_2002 threonine synthase — —
Erwinia tracheiphila SCR3 0.55 LU632_RS06675 cysM cysteine synthase CysM 0.19 LU632_RS02620 thrC threonine synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS10150 cysteine synthase B 0.20 CA265_RS23465 threonine synthase low > 88
Serratia liquefaciens MT49 0.55 IAI46_18490 cysteine synthase CysM 0.19 IAI46_03040 threonine synthase low > 86
Pantoea sp. MT58 0.54 IAI47_05405 cysteine synthase CysM 0.18 IAI47_16205 threonine synthase low > 76
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS13695 cysteine synthase CysM 0.19 ABZR88_RS18960 threonine synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT1852 cysteine synthase A (NCBI ptt file) 0.20 BT2401 threonine synthase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS08075 cysteine synthase A 0.20 HMPREF1078_RS10395 threonine synthase — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04596 cysteine synthase A 0.20 BACOVA_03023 threonine synthase low > 94
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS14120 cysteine synthase A 0.21 HMPREF1181_RS00050 threonine synthase low > 56
Bosea sp. OAE506 0.36 ABIE41_RS03545 cysteine synthase A 0.33 ABIE41_RS22985 threonine synthase — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS02875 cysteine synthase A 0.20 HMPREF1058_RS14730 threonine synthase low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS02185 cysteine synthase A 0.20 ABI39_RS10440 threonine synthase low > 72
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.17 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.53 59
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS10255 cysteine synthase A 0.25 A4249_RS00020 threonine synthase 0.93 48
Lysobacter sp. OAE881 0.35 ABIE51_RS16995 cysteine synthase A 0.18 ABIE51_RS17530 threonine synthase low > 62
Rhodospirillum rubrum S1H 0.34 Rru_A3794 Cysteine synthase (NCBI) 0.32 Rru_A3233 Threonine synthase (NCBI) — —
Sinorhizobium meliloti 1021 0.33 SMc00421 O-acetylserine sulfhydrylase A 0.35 SMc00077 threonine synthase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS01415 cysteine synthase A 0.35 ABIE40_RS04230 threonine synthase — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01005 cysteine synthase A 0.32 AMB_RS17140 threonine synthase — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS01080 cysteine synthase 0.34 AZOBR_RS10545 threonine synthase — —
Alteromonas macleodii MIT1002 0.31 MIT1002_02237 Cysteine synthase A 0.17 MIT1002_03084 Threonine synthase — —
Agrobacterium fabrum C58 0.31 Atu0312 cysteine synthase 0.35 Atu0787 threonine synthase — —
Shewanella loihica PV-4 0.31 Shew_2382 cysteine synthase A (RefSeq) 0.17 Shew_1081 threonine synthase (RefSeq) 0.69 55
Caulobacter crescentus NA1000 0.30 CCNA_03740 cysteine synthase 0.32 CCNA_03510 threonine synthase — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03740 cysteine synthase 0.32 CCNA_03510 threonine synthase — —
Azospirillum sp. SherDot2 0.30 MPMX19_00237 Cysteine synthase 0.35 MPMX19_00671 Threonine synthase — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3644 cysteine synthase A 0.33 Ga0059261_1999 threonine synthase 0.81 40
Bifidobacterium breve UCC2003 0.29 BBR_RS13140 cysteine synthase 0.22 BBR_RS14070 threonine synthase low > 34
Dinoroseobacter shibae DFL-12 0.25 Dshi_0891 cysteine synthase A (RefSeq) 0.36 Dshi_1146 threonine synthase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c13950 cysteine synthase CysK 0.32 PGA1_c06310 threonine synthase ThrC — —

Not shown: 11 genomes with orthologs for BPHYT_RS14845 only; 2 genomes with orthologs for BPHYT_RS08960 only