Conservation of cofitness between Atu1464 and Atu1462 in Agrobacterium fabrum C58

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1464 glycine cleavage system T protein, aminomethyltransferase 1.0 Atu1462 glycine cleavage system protein P2 0.97 1
Rhizobium sp. OAE497 0.81 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.89 ABIE40_RS09950 aminomethyl-transferring glycine dehydrogenase 0.95 1
Sinorhizobium meliloti 1021 0.76 SMc02047 glycine cleavage system aminomethyltransferase T 0.84 SMc02049 glycine dehydrogenase 0.95 1
Rhodopseudomonas palustris CGA009 0.68 TX73_019925 glycine cleavage system aminomethyltransferase GcvT 0.62 TX73_019935 aminomethyl-transferring glycine dehydrogenase 0.93 1
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_1095 Glycine cleavage system T protein 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_1095 Glycine cleavage system T protein 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.49 28
Pseudomonas sp. RS175 0.56 PFR28_03385 Aminomethyltransferase 0.56 PFR28_03383 Glycine dehydrogenase (decarboxylating) low > 88
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18160 glycine cleavage system protein T 0.56 AO356_18170 glycine dehydrogenase 0.34 6
Pseudomonas putida KT2440 0.55 PP_0986 aminomethyltransferase 0.55 PP_0988 glycine dehydrogenase 0.76 1
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.54 CSW01_15330 glycine dehydrogenase (decarboxylating) low > 62
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5556 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.56 Pf6N2E2_5558 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.67 1
Pseudomonas fluorescens SBW25 0.55 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT 0.56 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT 0.56 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase low > 109
Pseudomonas simiae WCS417 0.55 PS417_22370 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.56 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.62 2
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_03510 glycine cleavage system protein T 0.56 AO353_03500 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.55 3
Phaeobacter inhibens DSM 17395 0.53 PGA1_78p00290 aminomethyltransferase GcvT 0.73 PGA1_78p00310 glycine dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_623 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.57 Pf1N1B4_621 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 87
Acidovorax sp. GW101-3H11 0.53 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.54 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.41 26
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_1866 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.57 PfGW456L13_1868 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.85 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.51 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 90
Variovorax sp. SCN45 0.49 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.53 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 127
Dinoroseobacter shibae DFL-12 0.40 Dshi_2682 glycine cleavage system T protein (RefSeq) 0.71 Dshi_2680 glycine dehydrogenase (RefSeq) 0.72 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_00210 glycine cleavage system protein T 0.53 CA264_18410 glycine dehydrogenase (aminomethyl-transferring) — —
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_2308 gcvT glycine cleavage system aminomethyltransferase T 0.52 Synpcc7942_2047 gcvP glycine dehydrogenase 0.92 1
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS23960 glycine cleavage system protein T 0.52 CA265_RS25185 glycine dehydrogenase (aminomethyl-transferring) 0.34 30
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS21210 glycine cleavage system aminomethyltransferase GcvT 0.53 ABZR88_RS01785 aminomethyl-transferring glycine dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_0091 glycine cleavage system T protein 0.51 Echvi_0744 glycine dehydrogenase (decarboxylating) 0.47 2
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS04685 glycine cleavage system aminomethyltransferase GcvT 0.45 HMPREF1058_RS18780 aminomethyl-transferring glycine dehydrogenase 0.81 44
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS18950 glycine cleavage system aminomethyltransferase GcvT 0.45 ABI39_RS15100 aminomethyl-transferring glycine dehydrogenase low > 72
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS10420 glycine cleavage system aminomethyltransferase GcvT 0.47 HMPREF1078_RS15115 aminomethyl-transferring glycine dehydrogenase 0.62 14
Bacteroides thetaiotaomicron VPI-5482 0.26 BT4584 putative aminomethyltransferase (NCBI ptt file) 0.46 BT1147 glycine dehydrogenase [decarboxylating] (NCBI ptt file) low > 81
Pseudomonas sp. S08-1 0.25 OH686_11175 glycine cleavage system T protein 0.56 OH686_11165 glycine dehydrogenase 0.84 17
Bacteroides ovatus ATCC 8483 0.25 BACOVA_05378 aminomethyltransferase 0.47 BACOVA_04038 glycine dehydrogenase low > 94
Dechlorosoma suillum PS 0.25 Dsui_2735 glycine cleavage system T protein 0.55 Dsui_2737 glycine dehydrogenase, decarboxylating low > 51
Shewanella loihica PV-4 0.25 Shew_3064 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.52 Shew_3062 glycine dehydrogenase (RefSeq) 0.82 1
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS13255 glycine cleavage system aminomethyltransferase GcvT 0.46 HMPREF1181_RS16815 aminomethyl-transferring glycine dehydrogenase 0.80 5
Shewanella oneidensis MR-1 0.25 SO0779 gcvT glycine cleavage system T protein (NCBI ptt file) 0.53 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.98 1
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS19320 glycine cleavage system protein T 0.56 BPHYT_RS19330 glycine cleavage system P protein (EC 1.4.4.2) (from data) 0.67 1
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT 0.55 QEN71_RS29215 aminomethyl-transferring glycine dehydrogenase 0.85 1
Shewanella sp. ANA-3 0.25 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.53 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.96 1
Paraburkholderia graminis OAS925 0.24 ABIE53_000236 aminomethyltransferase 0.56 ABIE53_000238 glycine dehydrogenase 0.81 1
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.58 ABZR86_RS08305 aminomethyl-transferring glycine dehydrogenase 0.98 1
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_02411 aminomethyltransferase 0.56 H281DRAFT_02409 glycine dehydrogenase 0.74 2
Pseudomonas stutzeri RCH2 0.24 Psest_0181 glycine cleavage system T protein 0.56 Psest_0183 glycine dehydrogenase (decarboxylating) low > 67
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT 0.56 LRK54_RS00520 aminomethyl-transferring glycine dehydrogenase 0.79 2
Rhodanobacter denitrificans MT42 0.24 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT 0.56 LRK55_RS00260 aminomethyl-transferring glycine dehydrogenase 0.51 55
Lysobacter sp. OAE881 0.24 ABIE51_RS16365 glycine cleavage system aminomethyltransferase GcvT 0.55 ABIE51_RS14345 aminomethyl-transferring glycine dehydrogenase 0.86 1
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT 0.55 OKGIIK_06740 gcvP2 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain low > 52
Escherichia fergusonii Becca 0.23 EFB2_00997 Aminomethyltransferase 0.54 EFB2_00999 Glycine dehydrogenase (decarboxylating) low > 86
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS20060 glycine cleavage system protein T 0.57 RR42_RS20070 glycine dehydrogenase low > 128
Escherichia coli ECRC98 0.23 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00810 Aminomethyltransferase 0.54 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.78 2
Shewanella amazonensis SB2B 0.23 Sama_2721 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.53 Sama_2719 glycine dehydrogenase (RefSeq) 0.97 2
Escherichia coli ECRC101 0.23 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli BL21 0.23 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.54 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex low > 60
Escherichia coli ECRC101 0.23 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase — —
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0543 glycine cleavage system T protein 0.53 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) — —
Escherichia coli ECRC102 0.23 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli ECOR27 0.23 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase low > 57
Escherichia coli BW25113 0.23 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.54 b2903 gcvP glycine dehydrogenase (NCBI) 0.95 1
Escherichia coli ECRC99 0.23 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli ECRC62 0.23 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2957 glycine cleavage system T protein 0.53 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.67 4
Escherichia coli Nissle 1917 0.23 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.54 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.59 19
Escherichia coli ECOR38 0.23 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.82 6
Enterobacter sp. TBS_079 0.23 MPMX20_03764 Aminomethyltransferase 0.53 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.90 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.54 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.44 50
Castellaniella sp019104865 MT123 0.22 ABCV34_RS08845 glycine cleavage system aminomethyltransferase GcvT 0.53 ABCV34_RS08835 aminomethyl-transferring glycine dehydrogenase 0.90 21
Erwinia tracheiphila SCR3 0.22 LU632_RS05905 gcvT glycine cleavage system aminomethyltransferase GcvT 0.54 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase 0.51 55
Serratia liquefaciens MT49 0.22 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.52 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.40 62
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.55 Xcc-8004.3878.1 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.52 1
Dickeya dadantii 3937 0.22 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.53 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.53 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase low > 71
Pantoea sp. MT58 0.22 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.54 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.46 17
Dickeya dianthicola ME23 0.22 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.53 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase low > 75
Rahnella sp. WP5 0.21 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.52 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.56 2
Alteromonas macleodii MIT1002 0.21 MIT1002_02973 Aminomethyltransferase 0.56 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.97 1
Klebsiella michiganensis M5al 0.21 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.54 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.75 1
Pectobacterium carotovorum WPP14 0.21 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 0.53 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase low > 75
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT 0.55 ABZR87_RS03935 aminomethyl-transferring glycine dehydrogenase 0.77 1
Ralstonia solanacearum UW163 0.21 UW163_RS04960 glycine cleavage system protein T 0.55 UW163_RS04950 glycine dehydrogenase (aminomethyl-transferring) — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS08650 glycine cleavage system protein T 0.55 RALBFv3_RS08660 glycine dehydrogenase (aminomethyl-transferring) 0.77 22
Ralstonia solanacearum PSI07 0.21 RPSI07_RS08585 glycine cleavage system protein T 0.55 RPSI07_RS08575 glycine dehydrogenase (aminomethyl-transferring) 0.34 42
Ralstonia solanacearum GMI1000 0.21 RS_RS16500 aminomethyltransferase 0.55 RS_RS16510 glycine dehydrogenase 0.52 15
Mycobacterium tuberculosis H37Rv 0.21 Rv2211c Probable aminomethyltransferase GcvT (glycine cleavage system T protein) 0.51 Rv1832 Probable glycine dehydrogenase GcvB (glycine decarboxylase) (glycine cleavage system P-protein) — —

Not shown: 11 genomes with orthologs for Atu1464 only; 1 genomes with orthologs for Atu1462 only