Conservation of cofitness between Atu1100 and Atu0550 in Agrobacterium fabrum C58

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1100 hypothetical protein 1.0 Atu0550 flagellar P-ring protein precursor 0.32 5
Rhizobium sp. OAE497 0.70 ABIE40_RS06380 YicC/YloC family endoribonuclease 0.81 ABIE40_RS02995 flagellar basal body P-ring protein FlgI 0.26 101
Sinorhizobium meliloti 1021 0.68 SMc00576 hypothetical protein 0.71 SMc03032 flagellar basal body P-ring protein low > 103
Rhodopseudomonas palustris CGA009 0.45 TX73_015880 YicC family protein 0.45 TX73_020265 flagellar basal body P-ring protein FlgI low > 86
Bosea sp. OAE506 0.44 ABIE41_RS17740 YicC/YloC family endoribonuclease 0.55 ABIE41_RS05540 flagellar basal body P-ring protein FlgI low > 77
Magnetospirillum magneticum AMB-1 0.39 AMB_RS03835 YicC family protein 0.42 AMB_RS19360 flagellar basal body P-ring protein low > 64
Rhodospirillum rubrum S1H 0.38 Rru_A0428 hypothetical protein (NCBI) 0.44 Rru_A2849 Flagellar P-ring protein (NCBI) — —
Azospirillum sp. SherDot2 0.38 MPMX19_00983 hypothetical protein 0.45 MPMX19_05897 Flagellar P-ring protein — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c15840 TIGR00255 family protein 0.43 PGA1_c35600 flagellar P-ring protein FlgI low > 62
Caulobacter crescentus NA1000 0.37 CCNA_01752 YicC-family protein 0.45 CCNA_02665 flagellar P-ring protein FlgI low > 66
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01752 YicC-family protein 0.45 CCNA_02665 flagellar P-ring protein FlgI low > 67
Azospirillum brasilense Sp245 0.36 AZOBR_RS16330 hypothetical protein 0.45 AZOBR_RS30065 flagellar basal body P-ring biosynthesis protein FlgA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS06780 YicC family protein 0.44 A4249_RS08540 flagellar basal body P-ring protein FlgI low > 48
Dinoroseobacter shibae DFL-12 0.30 Dshi_1528 domain of unknown function DUF1732 (RefSeq) 0.39 Dshi_3376 flagellar P-ring protein (RefSeq) low > 64
Shewanella amazonensis SB2B 0.29 Sama_0319 hypothetical protein (RefSeq) 0.37 Sama_2311 flgI flagellar basal body P-ring protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.29 Shewana3_3778 hypothetical protein (RefSeq) 0.37 Shewana3_1328 flgI flagellar basal body P-ring protein (RefSeq) low > 73
Shewanella loihica PV-4 0.28 Shew_3489 hypothetical protein (RefSeq) 0.38 Shew_1352 flgI flagellar basal body P-ring protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.28 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) 0.38 SO3242 flgI flagellar P-ring protein FlgI (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.28 PP_5295 conserved protein of unknown function 0.39 PP_4383 Flagellar P-ring protein low > 96
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12495 hypothetical protein 0.38 AO356_03915 flagellar biosynthesis protein FlgI low > 104
Pseudomonas stutzeri RCH2 0.27 Psest_3814 TIGR00255 family protein 0.37 Psest_2961 Flagellar basal-body P-ring protein — —
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_01110 YicC family protein 0.36 CSW01_11190 flagellar P-ring protein low > 62
Pseudomonas sp. RS175 0.27 PFR28_04421 hypothetical protein 0.38 PFR28_00807 Flagellar P-ring protein — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4364 Protein YicC 0.38 Pf6N2E2_2625 Flagellar P-ring protein FlgI low > 103
Pseudomonas simiae WCS417 0.27 PS417_27815 hypothetical protein 0.38 PS417_19875 flagellar P-ring protein FlgI — —
Pseudomonas fluorescens SBW25 0.26 PFLU_RS29495 YicC family protein 0.38 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS29495 YicC family protein 0.38 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_09265 hypothetical protein 0.38 AO353_18610 flagellar biosynthesis protein FlgI low > 101
Alteromonas macleodii MIT1002 0.26 MIT1002_04072 hypothetical protein 0.40 MIT1002_01048 Basal body P-ring protein low > 70
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2116 Protein YicC 0.38 Pf1N1B4_3571 Flagellar P-ring protein FlgI — —
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_783 Protein YicC 0.38 PfGW456L13_4384 Flagellar P-ring protein FlgI low > 87
Pantoea sp. MT58 0.26 IAI47_00580 YicC family protein 0.31 IAI47_12130 flagellar basal body P-ring protein FlgI low > 76
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.1220.1 Protein YicC 0.37 Xcc-8004.2786.1 Flagellar P-ring protein FlgI low > 74
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS11895 YicC/YloC family endoribonuclease 0.40 ABZR86_RS20110 flagellar basal body P-ring protein FlgI low > 74
Pseudomonas sp. S08-1 0.25 OH686_13565 UPF0701 protein YicC 0.38 OH686_02940 Flagellar P-ring protein FlgI low > 80
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_0212 Conserved hypothetical protein 255 0.37 Psyr_3473 Flagellar P-ring protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_0212 Conserved hypothetical protein 255 0.37 Psyr_3473 Flagellar P-ring protein low > 86
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_12145 yicC YicC-like family, N-terminal region 0.41 OKGIIK_02685 flgI Flagellar basal body P-ring protein FlgI — —
Pectobacterium carotovorum WPP14 0.24 HER17_RS20905 YicC family protein 0.36 HER17_RS08200 flagellar basal body P-ring protein FlgI low > 75
Dickeya dianthicola ME23 0.24 DZA65_RS00575 YicC family protein 0.34 DZA65_RS13975 flagellar basal body P-ring protein FlgI low > 75
Dickeya dadantii 3937 0.24 DDA3937_RS20645 YicC family protein 0.34 DDA3937_RS13445 flagellar basal body P-ring protein FlgI low > 74
Dickeya dianthicola 67-19 0.24 HGI48_RS00540 YicC family protein 0.34 HGI48_RS13490 flagellar basal body P-ring protein FlgI low > 71
Rhodanobacter denitrificans MT42 0.24 LRK55_RS11475 YicC family protein 0.41 LRK55_RS13180 flagellar basal body P-ring protein FlgI low > 63
Serratia liquefaciens MT49 0.24 IAI46_24855 YicC family protein 0.34 IAI46_15925 flagellar basal body P-ring protein FlgI low > 86
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS11750 YicC family protein 0.41 LRK54_RS13440 flagellar basal body P-ring protein FlgI low > 59
Erwinia tracheiphila SCR3 0.24 LU632_RS22050 YicC family protein 0.32 LU632_RS10430 flagellar basal body P-ring protein FlgI low > 74
Lysobacter sp. OAE881 0.24 ABIE51_RS17280 YicC/YloC family endoribonuclease 0.38 ABIE51_RS16705 flagellar basal body P-ring protein FlgI low > 62
Enterobacter sp. TBS_079 0.23 MPMX20_00091 hypothetical protein 0.33 MPMX20_01759 Flagellar P-ring protein low > 85
Marinobacter adhaerens HP15 0.23 HP15_301 conserved hypothetical protein 0.39 HP15_1474 flagellar P-ring protein precursor I low > 73
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS10650 hypothetical protein 0.34 HSERO_RS10215 flagellar P-ring protein FlgI low > 78
Escherichia coli BW25113 0.23 b3644 yicC hypothetical protein (NCBI) 0.33 b1080 flgI homolog of Salmonella P-ring of flagella basal body (VIMSS) low > 76
Dechlorosoma suillum PS 0.23 Dsui_0497 TIGR00255 family protein 0.35 Dsui_1739 flagellar basal-body P-ring protein low > 51
Escherichia coli ECRC98 0.23 JDDGAC_19210 yicC UPF0701 protein YicC 0.33 JDDGAC_07300 flgI flagellar basal body P-ring protein FlgI — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS03650 YicC/YloC family endoribonuclease 0.32 QEN71_RS28885 flagellar basal body P-ring protein FlgI low > 153
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS15320 hypothetical protein 0.32 BPHYT_RS18860 flagellar P-ring protein FlgI low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF365 Protein YicC 0.33 GFF3361 Flagellar P-ring protein FlgI low > 78
Escherichia coli ECRC62 0.23 BNILDI_04050 yicC UPF0701 protein YicC 0.33 BNILDI_19330 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECOR27 0.23 NOLOHH_07465 yicC UPF0701 protein YicC 0.33 NOLOHH_21170 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC102 0.23 NIAGMN_13345 yicC UPF0701 protein YicC 0.33 NIAGMN_24190 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli BL21 0.23 ECD_03501 UPF0701 family protein 0.33 ECD_01076 putative flagellar basal body protein low > 60
Escherichia coli ECRC99 0.23 KEDOAH_12560 yicC UPF0701 protein YicC 0.33 KEDOAH_24115 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00058 hypothetical protein 0.33 OHPLBJKB_02585 Flagellar P-ring protein low > 73
Escherichia coli ECRC101 0.23 OKFHMN_15585 yicC UPF0701 protein YicC 0.33 OKFHMN_03640 flgI flagellar basal body P-ring protein FlgI — —
Ralstonia solanacearum GMI1000 0.23 RS_RS10815 YicC family protein 0.33 RS_RS18830 flagellar P-ring protein FlgI — —
Escherichia coli ECRC101 0.23 MCAODC_06095 yicC UPF0701 protein YicC 0.33 MCAODC_23000 flgI flagellar basal body P-ring protein FlgI — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS13855 YicC family protein 0.33 RPSI07_RS01425 flagellar basal body P-ring protein FlgI low > 81
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_04007 TIGR00255 family protein 0.32 H281DRAFT_05769 flagellar P-ring protein precursor FlgI 0.39 16
Escherichia coli Nissle 1917 0.22 ECOLIN_RS20760 YicC/YloC family endoribonuclease 0.33 ECOLIN_RS06250 flagellar basal body P-ring protein FlgI — —
Paraburkholderia graminis OAS925 0.22 ABIE53_003233 uncharacterized protein (TIGR00255 family) 0.32 ABIE53_000094 flagellar P-ring protein precursor FlgI low > 113
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS03330 YicC family protein 0.33 RALBFv3_RS21705 flagellar basal body P-ring protein FlgI low > 76
Ralstonia solanacearum UW163 0.22 UW163_RS10390 YicC family protein 0.33 UW163_RS17480 flagellar basal body P-ring protein FlgI — —
Escherichia fergusonii Becca 0.22 EFB2_00169 hypothetical protein 0.33 EFB2_02894 Flagellar P-ring protein low > 86
Rahnella sp. WP5 0.22 EX31_RS14510 YicC family protein 0.33 EX31_RS11280 flagellar basal body P-ring protein FlgI low > 89
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3894 TIGR00255 family protein 0.33 EX28DRAFT_1852 Flagellar basal-body P-ring protein low > 76
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS04905 hypothetical protein 0.36 RR42_RS35690 flagellar P-ring protein FlgI — —
Variovorax sp. SCN45 0.21 GFF2378 UPF0701 protein YicC 0.36 GFF5722 Flagellar P-ring protein FlgI — —
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS15240 YicC/YloC family endoribonuclease 0.34 ABZR87_RS22255 flagellar basal body P-ring protein FlgI low > 80
Acidovorax sp. GW101-3H11 0.21 Ac3H11_3667 Protein YicC 0.34 Ac3H11_1369 Flagellar P-ring protein FlgI — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS03510 DUF1732 domain-containing protein 0.33 ABCV34_RS05735 flagellar basal body P-ring protein FlgI low > 48
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1140 hypothetical protein (RefSeq) 0.38 DvMF_2521 flgI flagellar basal body P-ring protein (RefSeq) low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF3251 Protein YicC 0.34 GFF1408 Flagellar P-ring protein FlgI — —
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU0898 conserved hypothetical protein (TIGR) 0.40 DVU0516 flgI flagellar P-ring protein FlgI (TIGR) 0.45 25

Not shown: 15 genomes with orthologs for Atu1100 only; 1 genomes with orthologs for Atu0550 only