Conservation of cofitness between b2947 and b0439 in Escherichia coli BW25113

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2947 gshB glutathione synthetase (NCBI) 1.0 b0439 lon DNA-binding ATP-dependent protease La (NCBI) 0.40 9
Escherichia coli BL21 1.00 ECD_02777 glutathione synthetase 1.00 ECD_00391 DNA-binding ATP-dependent protease La low > 60
Escherichia coli ECOR27 1.00 NOLOHH_11145 gshB glutathione synthase 1.00 NOLOHH_01255 lon_P403L Lon protease low > 57
Escherichia coli ECRC62 1.00 BNILDI_09725 gshB glutathione synthase 1.00 BNILDI_22670 lon_P403L Lon protease — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00771 Glutathione synthetase 1.00 OHPLBJKB_03234 Lon protease low > 73
Escherichia coli ECRC99 1.00 KEDOAH_08865 gshB glutathione synthase 1.00 KEDOAH_19645 Lon protease — —
Escherichia coli ECRC98 1.00 JDDGAC_22905 gshB glutathione synthase 1.00 JDDGAC_11975 Lon protease — —
Escherichia coli ECRC102 1.00 NIAGMN_17040 gshB glutathione synthase 1.00 NIAGMN_06375 Lon protease — —
Escherichia coli ECRC101 1.00 OKFHMN_19275 gshB glutathione synthase 1.00 OKFHMN_08320 Lon protease — —
Escherichia coli ECOR38 1.00 HEPCGN_18580 gshB glutathione synthase 1.00 HEPCGN_06935 lon_P403L Lon protease 0.88 76
Escherichia coli ECRC101 1.00 MCAODC_09795 gshB glutathione synthase 1.00 MCAODC_27545 Lon protease — —
Escherichia fergusonii Becca 0.97 EFB2_00955 Glutathione synthetase 1.00 EFB2_03618 Lon protease low > 86
Escherichia coli Nissle 1917 0.97 ECOLIN_RS16395 glutathione synthase 1.00 ECOLIN_RS02635 endopeptidase La — —
Enterobacter sp. TBS_079 0.91 MPMX20_03805 Glutathione synthetase 0.98 MPMX20_01030 Lon protease low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS24075 glutathione synthase 0.98 BWI76_RS06535 endopeptidase La 0.46 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF3049 Glutathione synthetase (EC 6.3.2.3) 0.99 GFF4355 ATP-dependent protease La (EC 3.4.21.53) Type I low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) 0.97 EX28DRAFT_2531 endopeptidase La low > 76
Erwinia tracheiphila SCR3 0.84 LU632_RS05480 gshB glutathione synthase 0.93 LU632_RS18335 lon endopeptidase La — —
Serratia liquefaciens MT49 0.83 IAI46_21390 glutathione synthase 0.94 IAI46_05020 endopeptidase La low > 86
Pantoea sp. MT58 0.83 IAI47_03615 glutathione synthase 0.93 IAI47_14645 endopeptidase La — —
Rahnella sp. WP5 0.83 EX31_RS02665 glutathione synthase 0.93 EX31_RS22255 endopeptidase La low > 89
Dickeya dianthicola 67-19 0.82 HGI48_RS18495 glutathione synthase 0.93 HGI48_RS05695 endopeptidase La low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS19630 glutathione synthase 0.93 DZA65_RS06020 endopeptidase La low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS18560 glutathione synthase 0.94 DDA3937_RS05650 endopeptidase La low > 74
Pectobacterium carotovorum WPP14 0.82 HER17_RS02635 glutathione synthase 0.94 HER17_RS15840 endopeptidase La — —
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02490 glutathione synthetase 0.83 CSW01_09605 endopeptidase La low > 62
Shewanella loihica PV-4 0.74 Shew_3225 glutathione synthetase (RefSeq) 0.83 Shew_2506 ATP-dependent protease La (RefSeq) — —
Shewanella sp. ANA-3 0.73 Shewana3_3445 glutathione synthetase (RefSeq) 0.82 Shewana3_2659 Lon-A peptidase (RefSeq) — —
Shewanella amazonensis SB2B 0.73 Sama_0574 glutathione synthetase (RefSeq) 0.80 Sama_1226 endopeptidase La (RefSeq) low > 62
Shewanella oneidensis MR-1 0.72 SO0831 gshB glutathione synthetase (NCBI ptt file) 0.82 SO1796 lon ATP-dependent protease La (NCBI ptt file) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_0487 glutathione synthase 0.69 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_0487 glutathione synthase 0.69 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Pseudomonas sp. S08-1 0.66 OH686_10915 glutathione synthase 0.68 OH686_03635 endopeptidase La low > 80
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS28320 glutathione synthase 0.69 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas simiae WCS417 0.66 PS417_26675 glutathione synthetase 0.69 PS417_17225 DNA-binding protein — —
Pseudomonas fluorescens SBW25 0.66 PFLU_RS28320 glutathione synthase 0.69 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_13475 glutathione synthetase 0.70 AO356_01740 DNA-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) 0.70 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas putida KT2440 0.65 PP_4993 Glutathione synthetase 0.68 PP_2302 DNA-binding, ATP-dependent protease low > 96
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) 0.70 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_08110 glutathione synthetase 0.70 AO353_20185 DNA-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) 0.70 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I low > 87
Pseudomonas sp. RS175 0.65 PFR28_04232 Glutathione synthetase 0.70 PFR28_01230 Lon protease low > 88
Marinobacter adhaerens HP15 0.64 HP15_3512 glutathione synthetase 0.67 HP15_2183 DNA-binding ATP-dependent protease La low > 73
Pseudomonas stutzeri RCH2 0.62 Psest_0296 glutathione synthetase, prokaryotic 0.70 Psest_2285 ATP-dependent protease La low > 67
Alteromonas macleodii MIT1002 0.61 MIT1002_03055 Glutathione synthetase 0.80 MIT1002_02757 Lon protease low > 70
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0189 glutathione synthase (EC 6.3.2.3) 0.69 B158DRAFT_1038 ATP-dependent protease La — —
Lysobacter sp. OAE881 0.56 ABIE51_RS05210 glutathione synthase 0.67 ABIE51_RS14145 endopeptidase La — —
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.1501.1 Glutathione synthetase (EC 6.3.2.3) 0.66 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Acinetobacter radioresistens SK82 0.55 MPMX26_02936 Glutathione synthetase 0.53 MPMX26_02299 Lon protease low > 36
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_11075 gshB glutathione synthase 0.66 OKGIIK_08030 lon endopeptidase La low > 52
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS10370 glutathione synthase 0.67 ABZR86_RS07320 endopeptidase La — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS03970 glutathione synthase 0.66 LRK55_RS16460 endopeptidase La — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS04200 glutathione synthase 0.66 LRK54_RS16735 endopeptidase La — —
Paraburkholderia graminis OAS925 0.48 ABIE53_000657 glutathione synthase 0.66 ABIE53_002117 ATP-dependent Lon protease 0.46 74
Ralstonia solanacearum UW163 0.48 UW163_RS02720 glutathione synthase 0.70 UW163_RS14650 endopeptidase La — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS10860 glutathione synthase 0.70 RALBFv3_RS01340 endopeptidase La — —
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS00435 glutathione synthetase 0.68 HSERO_RS12905 peptidase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2650 Glutathione synthetase (EC 6.3.2.3) 0.67 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I low > 90
Ralstonia solanacearum GMI1000 0.47 RS_RS01700 glutathione synthetase 0.70 RS_RS08655 endopeptidase La — —
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_02010 glutathione synthase 0.68 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS22450 glutathione synthase 0.70 RPSI07_RS16135 endopeptidase La — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) 0.67 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I 0.43 72
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS06710 glutathione synthase 0.70 ABZR87_RS12785 endopeptidase La low > 80
Dechlorosoma suillum PS 0.46 Dsui_0746 glutathione synthetase 0.67 Dsui_2198 ATP-dependent protease La low > 51
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS02560 glutathione synthetase 0.68 BPHYT_RS09460 peptidase — —
Variovorax sp. OAS795 0.46 ABID97_RS04630 glutathione synthase 0.67 ABID97_RS17590 endopeptidase La 0.39 63
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS01780 glutathione synthetase 0.67 RR42_RS09030 DNA-binding protein — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS01415 glutathione synthase 0.68 QEN71_RS21975 endopeptidase La 0.72 9
Castellaniella sp019104865 MT123 0.45 ABCV34_RS04795 glutathione synthase 0.67 ABCV34_RS05125 endopeptidase La — —
Variovorax sp. SCN45 0.45 GFF6322 Glutathione synthetase (EC 6.3.2.3) 0.65 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I low > 127
Magnetospirillum magneticum AMB-1 0.41 AMB_RS22800 glutathione synthase 0.66 AMB_RS14035 endopeptidase La low > 64
Rhodospirillum rubrum S1H 0.40 Rru_A3690 Glutathione synthetase (NCBI) 0.65 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) — —
Azospirillum sp. SherDot2 0.40 MPMX19_02474 Glutathione synthetase 0.66 MPMX19_01545 Lon protease — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS02170 glutathione synthetase 0.66 AZOBR_RS07145 peptidase 0.44 39
Sinorhizobium meliloti 1021 0.39 SMc00419 glutathione synthetase 0.63 SMc01905 ATP-dependent protease LA protein — —
Agrobacterium fabrum C58 0.38 Atu0310 glutathione synthetase 0.63 Atu1261 ATP-dependent protease LA — —
Rhizobium sp. OAE497 0.38 ABIE40_RS01405 glutathione synthase 0.63 ABIE40_RS07100 endopeptidase La — —
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS14140 glutathione synthase 0.61 A4249_RS06460 endopeptidase La — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c26710 glutathione synthetase GshB 0.60 PGA1_c20540 ATP-dependent protease La — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_2757 glutathione synthase (EC 6.3.2.3) 0.60 Ga0059261_0102 endopeptidase La — —
Rhodopseudomonas palustris CGA009 0.36 TX73_001670 glutathione synthase 0.64 TX73_015345 endopeptidase La — —
Bosea sp. OAE506 0.35 ABIE41_RS03330 glutathione synthase 0.61 ABIE41_RS18050 endopeptidase La — —
Dinoroseobacter shibae DFL-12 0.35 Dshi_2829 glutathione synthetase (RefSeq) 0.60 Dshi_1777 ATP-dependent protease La (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00140 glutathione synthetase 0.61 CCNA_02037 ATP-dependent endopeptidase Lon — —
Caulobacter crescentus NA1000 0.35 CCNA_00140 glutathione synthetase 0.61 CCNA_02037 ATP-dependent endopeptidase Lon — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_17395 glutathione synthetase 0.44 CA264_00045 endopeptidase La low > 74

Not shown: 1 genomes with orthologs for b2947 only; 11 genomes with orthologs for b0439 only