Homologs of rpmE from Synechococcus elongatus PCC 7942

rpmE: 50S ribosomal protein L31
SEED: LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent
KEGG: large subunit ribosomal protein L31

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Synechococcus elongatus PCC 7942 Synpcc7942_2204 rpmE 50S ribosomal protein L31 no data 100 100
o Shewanella oneidensis MR-1 SO4120 rpmE ribosomal protein L31 (NCBI ptt file) no data 48 86
o Shewanella loihica PV-4 Shew_0381 rpmE 50S ribosomal protein L31 (RefSeq) no data 48 86
o Kangiella aquimarina DSM 16071 B158DRAFT_0756 LSU ribosomal protein L31P no data 47 83
o Shewanella amazonensis SB2B Sama_0447 rpmE 50S ribosomal protein L31 (RefSeq) no data 45 86
o Shewanella sp. ANA-3 Shewana3_3670 rpmE 50S ribosomal protein L31 (RefSeq) no data 46 86
o Alteromonas macleodii MIT1002 MIT1002_03666 50S ribosomal protein L31 no data 46 86
o Pseudomonas fluorescens GW456-L13 PfGW456L13_285 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent no data 44 92
o Pseudomonas sp. S08-1 OH686_10075 ribosomal protein L31 no data 46 86
o Pseudomonas stutzeri RCH2 Psest_3723 ribosomal protein L31 no data 45 86
o Dechlorosoma suillum PS Dsui_3219 ribosomal protein L31 no data 49 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_13535 50S ribosomal protein L31 no data 39 91
o Mycobacterium tuberculosis H37Rv Rv1298 50S ribosomal protein L31 RpmE no data 48 83
  Bifidobacterium breve UCC2003 BBR_RS18090 50S ribosomal protein L31 no data 47 79
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1547 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent no data 41 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU2912 rpmE ribosomal protein L31 (TIGR) no data 39 83
o Pseudomonas sp. RS175 PFR28_05003 50S ribosomal protein L31 no data 43 86
o Pseudomonas fluorescens FW300-N2C3 AO356_09435 50S ribosomal protein L31 no data 43 86
o Pseudomonas fluorescens FW300-N2E3 AO353_12450 50S ribosomal protein L31 no data 41 86
o Dickeya dianthicola 67-19 HGI48_RS20435 50S ribosomal protein L31 no data 39 84
o Dickeya dianthicola ME23 DZA65_RS21480 50S ribosomal protein L31 no data 39 84
o Pseudomonas syringae pv. syringae B728a Psyr_0399 LSU ribosomal protein L31P no data 38 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0399 LSU ribosomal protein L31P no data 38 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3765 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent no data 43 86
o Pseudomonas simiae WCS417 PS417_01940 50S ribosomal protein L31 no data 43 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15110 50S ribosomal protein L31 type B no data 54 62
  Ralstonia solanacearum GMI1000 RS_RS05925 50S ribosomal protein L31 type B no data 54 62
  Ralstonia solanacearum PSI07 RPSI07_RS18265 50S ribosomal protein L31 type B no data 54 62
  Ralstonia solanacearum UW163 UW163_RS12580 50S ribosomal protein L31 type B no data 54 62
o Marinobacter adhaerens HP15 HP15_471 ribosomal protein L31 no data 43 83
o Pseudomonas fluorescens SBW25 PFLU_RS01985 50S ribosomal protein L31 no data 42 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS01985 50S ribosomal protein L31 no data 42 97
o Escherichia coli BL21 ECD_03821 50S ribosomal subunit protein L31 no data 42 84
o Escherichia fergusonii Becca EFB2_04682 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECOR27 NOLOHH_05860 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECOR38 HEPCGN_12360 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECRC101 OKFHMN_13715 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECRC101 MCAODC_04215 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECRC102 NIAGMN_11470 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECRC62 BNILDI_05670 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECRC98 JDDGAC_17340 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli ECRC99 KEDOAH_14445 rpmE 50S ribosomal protein L31 no data 42 84
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04115 50S ribosomal protein L31 no data 42 84
  Escherichia coli Nissle 1917 ECOLIN_RS22660 50S ribosomal protein L31 no data 42 84
  Escherichia coli Nissle 1917 ECOLIN_RS22685 50S ribosomal protein L31 no data 42 84
o Escherichia coli Nissle 1917 ECOLIN_RS22710 50S ribosomal protein L31 no data 42 84
o Escherichia coli BW25113 b3936 rpmE 50S ribosomal subunit protein L31 (NCBI) no data 42 84
o Dickeya dadantii 3937 DDA3937_RS00940 50S ribosomal protein L31 no data 41 84
  Pseudomonas putida KT2440 PP_5087 ribosomal protein L31 no data 39 86
o Klebsiella michiganensis M5al BWI76_RS00775 50S ribosomal protein L31 no data 42 84
o Desulfovibrio vulgaris Miyazaki F DvMF_1442 rpmE 50S ribosomal protein L31 (RefSeq) no data 39 86
  Ralstonia sp. UNC404CL21Col ABZR87_RS10740 type B 50S ribosomal protein L31 no data 49 70
o Acinetobacter radioresistens SK82 MPMX26_01063 50S ribosomal protein L31 no data 38 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2318 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent no data 35 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00824 LSU ribosomal protein L31P no data 58 52
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16060 type B 50S ribosomal protein L31 no data 42 64
o Erwinia tracheiphila SCR3 LU632_RS19650 rpmE 50S ribosomal protein L31 no data 39 84
  Burkholderia phytofirmans PsJN BPHYT_RS09025 50S ribosomal protein L31 type B no data 58 52
  Paraburkholderia graminis OAS925 ABIE53_002040 large subunit ribosomal protein L31 no data 58 52
  Cupriavidus basilensis FW507-4G11 RR42_RS13325 50S ribosomal protein L31 no data 58 52
  Herbaspirillum seropedicae SmR1 HSERO_RS04310 50S ribosomal protein L31 no data 47 66
o Pantoea sp. MT58 IAI47_00870 50S ribosomal protein L31 insig. 39 84
  Lysobacter sp. OAE881 ABIE51_RS17205 type B 50S ribosomal protein L31 no data 50 52
  Paraburkholderia sabiae LMG 24235 QEN71_RS22325 type B 50S ribosomal protein L31 no data 49 61
o Bacteroides stercoris CC31F HMPREF1181_RS13250 type B 50S ribosomal protein L31 no data 35 83
o Rhodanobacter sp. FW510-T8 OKGIIK_12080 rpmE type B 50S ribosomal protein L31 no data 35 83
  Phocaeicola dorei CL03T12C01 ABI39_RS08260 type B 50S ribosomal protein L31 no data 37 69
o Rhodanobacter denitrificans MT42 LRK55_RS11540 type B 50S ribosomal protein L31 no data 35 83
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11815 type B 50S ribosomal protein L31 no data 35 83
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00655 type B 50S ribosomal protein L31 no data 32 83
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11830 type B 50S ribosomal protein L31 no data 36 83
  Enterobacter asburiae PDN3 EX28DRAFT_4409 ribosomal protein L31 no data 36 84
  Enterobacter sp. TBS_079 MPMX20_04533 50S ribosomal protein L31 no data 36 84
  Bacteroides ovatus ATCC 8483 BACOVA_04437 ribosomal protein L31 no data 45 52
  Bacteroides thetaiotaomicron VPI-5482 BT1692 50S ribosomal protein L31 type B (NCBI ptt file) no data 45 52
  Serratia liquefaciens MT49 IAI46_24550 50S ribosomal protein L31 no data 39 84
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4373 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent insig. 35 88
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1739 ribosomal protein L31 no data 37 82
  Vibrio cholerae E7946 ATCC 55056 CSW01_04510 50S ribosomal protein L31 type B cofit 45 55
  Pectobacterium carotovorum WPP14 HER17_RS00875 50S ribosomal protein L31 no data 39 84
  Rahnella sp. WP5 EX31_RS25365 50S ribosomal protein L31 strong 34 84
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1202.1 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent no data 45 52
  Fusobacterium nucleatum SB010 HUW76_07620 type B 50S ribosomal protein L31 cofit 46 53
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19900 50S ribosomal protein L31 no data 44 62
  Enterobacter asburiae PDN3 EX28DRAFT_2504 ribosomal protein L31 insig. 34 83
  Enterobacter sp. TBS_079 MPMX20_01056 50S ribosomal protein L31 type B insig. 34 83
  Variovorax sp. SCN45 GFF1101 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent no data 36 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4238 LSU ribosomal protein L31p no data 52 56
  Escherichia fergusonii Becca EFB2_03748 50S ribosomal protein L31 type B insig. 31 88
  Escherichia coli ECOR38 HEPCGN_07710 rpmE2-1 type B 50S ribosomal protein L31 cofit 31 88
  Escherichia coli ECRC101 OKFHMN_09190 rpmE2-1 type B 50S ribosomal protein L31 insig. 31 88
  Escherichia coli ECRC101 MCAODC_28405 rpmE2-1 type B 50S ribosomal protein L31 insig. 31 88
  Escherichia coli ECRC102 NIAGMN_07245 rpmE2-1 type B 50S ribosomal protein L31 insig. 31 88
  Escherichia coli ECRC62 BNILDI_00085 rpmE2-1 type B 50S ribosomal protein L31 insig. 31 88
  Escherichia coli ECRC98 JDDGAC_12830 rpmE2-1 type B 50S ribosomal protein L31 no data 31 88
  Escherichia coli ECRC99 KEDOAH_18760 rpmE2-1 type B 50S ribosomal protein L31 no data 31 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03385 50S ribosomal protein L31 type B insig. 31 88
  Variovorax sp. OAS795 ABID97_RS14640 type B 50S ribosomal protein L31 no data 36 96
  Rhodospirillum rubrum S1H Rru_A1072 Ribosomal protein L31 (NCBI) no data 32 83
  Azospirillum sp. SherDot2 MPMX19_01924 50S ribosomal protein L31 no data 31 83