Homologs of Psyr_3585 from Pseudomonas syringae pv. syringae B728a

Sua5/YciO/YrdC/YwlC
SEED: Hypothetical YciO protein, TsaC/YrdC paralog
KEGG: putative translation factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_3585 Sua5/YciO/YrdC/YwlC insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3585 Sua5/YciO/YrdC/YwlC insig. 100 100
o Pseudomonas sp. RS175 PFR28_03318 putative protein YciO insig. 83 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5626 Hypothetical YciO protein, TsaC/YrdC paralog sig. 84 92
o Pseudomonas sp. S08-1 OH686_20800 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family insig. 84 92
o Pseudomonas fluorescens FW300-N2C3 AO356_18500 hypothetical protein insig. 84 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3552 Hypothetical YciO protein, TsaC/YrdC paralog insig. 83 94
o Pseudomonas fluorescens FW300-N2E3 AO353_18525 hypothetical protein insig. 82 94
o Pseudomonas sp. DMC3 GFF2400 putative protein YciO insig. 80 98
o Pseudomonas segetis P6 MPMX49_02912 putative protein YciO insig. 81 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04591 putative protein YciO cofit 83 92
o Pseudomonas fluorescens SBW25 PFLU_RS23910 threonylcarbamoyl-AMP synthase insig. 83 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23910 threonylcarbamoyl-AMP synthase sig. 83 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4404 Hypothetical YciO protein, TsaC/YrdC paralog insig. 82 92
o Pseudomonas simiae WCS417 PS417_22270 hypothetical protein sig. 82 92
o Pseudomonas stutzeri RCH2 Psest_1888 Sua5/YciO/YrdC/YwlC family protein sig. 79 92
o Pseudomonas putida KT2440 PP_4499 putative maturation enzyme sig. 75 98
o Pseudomonas aeruginosa PA14 IKLFDK_16260 L-threonylcarbamoyladenylate synthase insig. 78 92
o Pseudomonas sp. SVBP6 COO64_RS21750 L-threonylcarbamoyladenylate synthase insig. 78 92
o Pseudomonas sp. BP01 JOY50_RS01070 L-threonylcarbamoyladenylate synthase insig. 77 92
o Marinobacter adhaerens HP15 HP15_1188 Sua5/YciO/YrdC/YwlC family protein sig. 61 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_05965 threonylcarbamoyl-AMP synthase insig. 61 92
o Rahnella sp. WP5 EX31_RS09945 threonylcarbamoyl-AMP synthase insig. 60 92
o Serratia liquefaciens MT49 IAI46_14010 threonylcarbamoyl-AMP synthase insig. 60 92
o Alteromonas macleodii MIT1002 MIT1002_01432 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN insig. 60 92
o Enterobacter asburiae PDN3 EX28DRAFT_0939 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family cofit 60 92
o Enterobacter sp. TBS_079 MPMX20_02508 putative protein YciO sig. 60 92
o Escherichia coli BL21 ECD_01241 putative RNA binding protein insig. 61 92
o Escherichia fergusonii Becca EFB2_02660 putative protein YciO insig. 61 92
o Escherichia coli ECOR27 NOLOHH_20300 yciO L-threonylcarbamoyladenylate synthase insig. 61 92
o Escherichia coli ECOR38 HEPCGN_25550 yciO L-threonylcarbamoyladenylate synthase insig. 61 92
o Escherichia coli ECRC100 OKFHMN_02640 yciO L-threonylcarbamoyladenylate synthase insig. 61 92
o Escherichia coli ECRC101 MCAODC_15625 yciO L-threonylcarbamoyladenylate synthase sig. 61 92
o Escherichia coli ECRC102 NIAGMN_26810 yciO L-threonylcarbamoyladenylate synthase insig. 61 92
o Escherichia coli ECRC62 BNILDI_18450 yciO L-threonylcarbamoyladenylate synthase insig. 61 92
o Escherichia coli ECRC98 JDDGAC_05185 yciO L-threonylcarbamoyladenylate synthase insig. 61 92
o Escherichia coli ECRC99 KEDOAH_26110 yciO L-threonylcarbamoyladenylate synthase no data 61 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02417 putative protein YciO insig. 61 92
o Escherichia coli Nissle 1917 ECOLIN_RS07625 L-threonylcarbamoyladenylate synthase no data 61 92
o Escherichia coli BW25113 b1267 yciO orf, hypothetical protein (VIMSS) no data 61 92
o Erwinia amylovora T8 OLJFJH_13505 L-threonylcarbamoyladenylate synthase insig. 60 92
o Klebsiella pneumoniae MKP103 KDGMDA_19575 L-threonylcarbamoyladenylate synthase insig. 61 92
o Klebsiella michiganensis M5al BWI76_RS11870 hypothetical protein sig. 60 92
o Ralstonia solanacearum GMI1000 RS_RS05680 threonylcarbamoyl-AMP synthase insig. 58 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14870 threonylcarbamoyl-AMP synthase insig. 58 93
o Ralstonia solanacearum UW163 UW163_RS12340 threonylcarbamoyl-AMP synthase no data 58 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2720 Hypothetical YciO protein, TsaC/YrdC paralog insig. 60 92
o Dickeya dadantii 3937 DDA3937_RS10495 threonylcarbamoyl-AMP synthase insig. 59 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS10525 L-threonylcarbamoyladenylate synthase insig. 58 93
o Dickeya dianthicola 67-19 HGI48_RS10495 threonylcarbamoyl-AMP synthase insig. 58 92
o Dickeya dianthicola ME23 DZA65_RS10975 threonylcarbamoyl-AMP synthase insig. 58 92
o Ralstonia solanacearum PSI07 RPSI07_RS18490 threonylcarbamoyl-AMP synthase no data 57 93
o Pectobacterium carotovorum WPP14 HER17_RS10905 threonylcarbamoyl-AMP synthase insig. 58 92
o Cupriavidus basilensis FW507-4G11 RR42_RS06230 hypothetical protein insig. 58 93
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_23520 L-threonylcarbamoyladenylate synthase cofit 60 92
o Erwinia tracheiphila SCR3 LU632_RS12745 threonylcarbamoyl-AMP synthase insig. 60 92
o Kangiella aquimarina DSM 16071 B158DRAFT_2305 translation factor SUA5 insig. 56 92
o Pantoea sp. MT58 IAI47_09200 threonylcarbamoyl-AMP synthase insig. 57 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06985 threonylcarbamoyl-AMP synthase cofit 57 92
o Shewanella amazonensis SB2B Sama_2127 Sua5/YciO/YrdC/YwlC family protein (RefSeq) strong 56 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00505 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family insig. 56 93
o Acinetobacter radioresistens SK82 MPMX26_02446 putative protein YciO insig. 56 91
o Acinetobacter baumannii LAC-4 RR41_RS15200 threonylcarbamoyl-AMP synthase insig. 54 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS05920 L-threonylcarbamoyladenylate synthase insig. 55 93
o Herbaspirillum seropedicae SmR1 HSERO_RS16410 translation factor Sua5 insig. 56 94
o Burkholderia phytofirmans PsJN BPHYT_RS12635 translation factor Sua5 sig. 56 93
o Dechlorosoma suillum PS Dsui_2730 Sua5/YciO/YrdC/YwlC family protein sig. 51 93
o Paraburkholderia graminis OAS925 ABIE53_002753 tRNA threonylcarbamoyl adenosine modification protein (Sua5/YciO/YrdC/YwlC family) insig. 55 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF110 Hypothetical YciO protein, TsaC/YrdC paralog insig. 53 90
o Shewanella loihica PV-4 Shew_2249 Sua5/YciO/YrdC/YwlC family protein (RefSeq) insig. 57 93
o Shewanella oneidensis MR-1 SO3016 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) strong 57 92
o Shewanella sp. ANA-3 Shewana3_1522 translation factor SUA5 (RefSeq) insig. 57 92
o Acidovorax sp. GW101-3H11 Ac3H11_1753 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA insig. 51 93
o Castellaniella sp019104865 MT123 ABCV34_RS15815 L-threonylcarbamoyladenylate synthase insig. 51 93
o Methylophilus sp. DMC18 GFF818 putative protein YciO insig. 52 92
o Variovorax sp. OAS795 ABID97_RS22605 L-threonylcarbamoyladenylate synthase cofit 50 90
o Variovorax sp. SCN45 GFF5789 YciO protein, TsaC/YrdC paralog insig. 49 90
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07615 L-threonylcarbamoyladenylate synthase insig. 42 91
o Cellulophaga baltica 18 M666_RS15410 L-threonylcarbamoyladenylate synthase insig. 42 90
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05100 threonylcarbamoyl-AMP synthase insig. 43 89
o Synechocystis sp000284455 PCC 6803 SGL_RS02660 L-threonylcarbamoyladenylate synthase strong 39 91
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0371 Sua5/YciO/YrdC/YwlC family protein insig. 40 91
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02115 threonylcarbamoyl-AMP synthase sig. 39 90
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS05180 L-threonylcarbamoyladenylate synthase insig. 39 89
o Synechococcus elongatus PCC 7942 Synpcc7942_2350 translation factor SUA5 strong 37 90
o Phocaeicola dorei CL03T12C01 ABI39_RS10130 threonylcarbamoyl-AMP synthase insig. 37 91
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14510 threonylcarbamoyl-AMP synthase insig. 37 91
o Bacteroides thetaiotaomicron VPI-5482 BT4128 conserved hypothetical protein (NCBI ptt file) sig. 38 89
o Bacteroides ovatus ATCC 8483 BACOVA_04938 Sua5/YciO/YrdC/YwlC family protein sig. 37 89
o Bacteroides stercoris CC31F HMPREF1181_RS06425 threonylcarbamoyl-AMP synthase insig. 39 89
  Marinobacter adhaerens HP15 HP15_3747 Sua5/YciO/YrdC/YwlC family protein sig. 31 77
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02935 Sua5/YciO/YrdC/YwlC family protein no data 31 77
  Rhodospirillum rubrum S1H Rru_A0444 Sua5/YciO/YrdC/YwlC (NCBI) no data 31 87
  Rhodanobacter sp. FW510-T8 OKGIIK_13760 Threonylcarbamoyl-AMP synthase no data 29 77
  Shewanella loihica PV-4 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) no data 28 77
  Pseudomonas sp. BP01 JOY50_RS08230 L-threonylcarbamoyladenylate synthase no data 30 82
  Bosea sp. OAE506 ABIE41_RS22310 L-threonylcarbamoyladenylate synthase no data 29 85
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13860 Sua5/YciO/YrdC/YwlC family protein no data 32 79
  Lysobacter sp. OAE881 ABIE51_RS02215 Sua5/YciO/YrdC/YwlC family protein no data 31 82
  Pseudomonas putida KT2440 PP_0070 Threonylcarbamoyl-AMP synthase no data 30 82