| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas putida KT2440 | PP_3934 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS03910 | | LysR family transcriptional regulator | insig. | 94 | 95 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4118 | | Cyn operon transcriptional activator | insig. | 61 | 95 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_28070 | | LysR family transcriptional regulator | insig. | 60 | 95 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_94 | | Cyn operon transcriptional activator | sig. | 62 | 95 |
| o | Pseudomonas sp. SVBP6 | COO64_RS02725 | | LysR family transcriptional regulator | insig. | 64 | 95 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37940 | | LysR family transcriptional regulator | insig. | 37 | 88 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21335 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 35 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_04565 | | HTH-type transcriptional regulator PgrR | insig. | 33 | 89 |
| | Agrobacterium fabrum C58 | Atu5187 | | LysR family transcriptional regulator | insig. | 36 | 90 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05000 | | LysR family transcriptional regulator | strong | 35 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09740 | | LysR family transcriptional regulator | strong | 34 | 92 |
| | Ralstonia solanacearum UW163 | UW163_RS03840 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Bosea sp. OAE506 | ABIE41_RS05265 | | LysR substrate-binding domain-containing protein | insig. | 34 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS00325 | | LysR family transcriptional regulator | cofit | 34 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS23625 | | LysR family transcriptional regulator | strong | 34 | 92 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 31 | 90 |
| | Rhodospirillum rubrum S1H | Rru_A0461 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 34 | 93 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS14490 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 36 | 79 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 31 | 95 |
| | Pseudomonas stutzeri RCH2 | Psest_2569 | | Transcriptional regulator | insig. | 32 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS02065 | | LysR family transcriptional regulator | insig. | 34 | 83 |
| | Variovorax sp. SCN45 | GFF4333 | | Transcriptional regulator, LysR family | insig. | 33 | 93 |
| | Rahnella sp. WP5 | EX31_RS10405 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| | Caulobacter crescentus NA1000 | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 34 | 92 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 34 | 92 |
| | Rahnella sp. WP5 | EX31_RS11970 | | LysR family transcriptional regulator | insig. | 34 | 83 |
| | Pantoea sp. MT58 | IAI47_16730 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| | Pseudomonas sp. S08-1 | OH686_18510 | | Transcriptional regulator, LysR family | insig. | 30 | 94 |
| | Rahnella sp. WP5 | EX31_RS07465 | | LysR family transcriptional regulator | insig. | 30 | 94 |
| | Pseudomonas putida KT2440 | PP_1164 | | Transcriptional regulator, LysR family | insig. | 34 | 83 |
| | Pantoea sp. MT58 | IAI47_01190 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| | Pseudomonas sp. DMC3 | GFF1128 | | HTH-type transcriptional regulator DmlR | cofit | 31 | 91 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10935 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 30 | 91 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 33 | 88 |
| | Lysobacter sp. OAE881 | ABIE51_RS01040 | | LysR family transcriptional regulator | insig. | 33 | 90 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| | Serratia liquefaciens MT49 | IAI46_07095 | | LysR family transcriptional regulator | insig. | 36 | 88 |
| | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 31 | 94 |
| | Bosea sp. OAE506 | ABIE41_RS22155 | | LysR family transcriptional regulator | insig. | 34 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10025 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33825 | | LysR family transcriptional regulator | insig. | 33 | 91 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3681 | | Transcriptional regulator, LysR family | insig. | 29 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 34 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 33 | 94 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS10685 | | LysR family transcriptional regulator | insig. | 32 | 88 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20495 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Methylophilus sp. DMC18 | GFF957 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 81 |
| | Pseudomonas sp. DMC3 | GFF553 | | HTH-type transcriptional regulator DmlR | cofit | 31 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_691 | | Transcriptional regulator | insig. | 31 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 34 | 94 |
| | Variovorax sp. OAS795 | ABID97_RS15825 | | LysR substrate-binding domain-containing protein | insig. | 33 | 91 |
| | Bosea sp. OAE506 | ABIE41_RS06370 | | LysR family transcriptional regulator | insig. | 32 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00352 | | transcriptional regulator, LysR family | insig. | 32 | 81 |
| | Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 33 | 81 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS19135 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19135 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08890 | | LysR family transcriptional regulator | cofit | 30 | 93 |
| | Sinorhizobium meliloti 1021 | SMc02984 | | transcriptional regulator | insig. | 30 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_004366 | | DNA-binding transcriptional LysR family regulator | sig. | 36 | 83 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4646.1 | | Transcriptional regulator, LysR family | insig. | 35 | 92 |
| | Variovorax sp. SCN45 | GFF3108 | | Transcriptional regulator, LysR family | insig. | 33 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS11620 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| | Xanthobacter sp. DMC5 | GFF3690 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 92 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0884 | | Transcriptional regulator | insig. | 33 | 92 |
| | Sphingobium sp. HT1-2 | GFF1839 | | Transcriptional regulator, LysR family | cofit | 33 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4234 | | Transcriptional regulator | insig. | 32 | 92 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 29 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 32 | 93 |
| | Pseudomonas segetis P6 | MPMX49_02496 | | HTH-type transcriptional regulator DmlR | insig. | 31 | 92 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 34 | 89 |
| | Agrobacterium fabrum C58 | Atu0664 | | transcriptional regulator, LysR family | strong | 31 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4236 | | Transcriptional regulator, LysR family | insig. | 30 | 84 |
| | Serratia liquefaciens MT49 | IAI46_02960 | | LysR family transcriptional regulator | insig. | 34 | 90 |
| | Pseudomonas sp. RS175 | PFR28_04672 | | HTH-type transcriptional regulator DmlR | insig. | 33 | 90 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 33 | 92 |
| | Pseudomonas simiae WCS417 | PS417_17205 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39085 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10520 | | LysR family transcriptional regulator | no data | 31 | 85 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11160 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_03837 | | HTH-type transcriptional regulator PgrR | insig. | 35 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS16695 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Pseudomonas segetis P6 | MPMX49_03437 | | HTH-type transcriptional regulator DmlR | insig. | 31 | 92 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 30 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS04615 | | LysR family transcriptional regulator | insig. | 35 | 90 |
| | Sinorhizobium meliloti 1021 | SMa1828 | | transcriptional activator | insig. | 34 | 80 |
| | Sphingobium sp. HT1-2 | GFF1471 | | Transcriptional regulator, LysR family | cofit | 33 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15895 | | LysR family transcriptional regulator | insig. | 33 | 92 |