Homologs of PP_0914 from Pseudomonas putida KT2440

GGDEF domain protein
SEED: GGDEF domain/EAL domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0914 GGDEF domain protein strong 100 100
o Pseudomonas sp. BP01 JOY50_RS14210 bifunctional diguanylate cyclase/phosphodiesterase insig. 98 98
o Pseudomonas sp. SVBP6 COO64_RS12085 bifunctional diguanylate cyclase/phosphodiesterase strong 93 98
o Pseudomonas fluorescens FW300-N2C3 AO356_05010 diguanylate cyclase strong 88 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2852 GGDEF domain/EAL domain protein strong 88 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_714 GGDEF domain/EAL domain protein insig. 89 98
o Pseudomonas fluorescens FW300-N2E3 AO353_03970 diguanylate cyclase strong 89 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1777 GGDEF domain/EAL domain protein sig. 88 98
o Pseudomonas sp. RS175 PFR28_00605 hypothetical protein strong 88 98
o Pseudomonas sp. DMC3 GFF5063 hypothetical protein cofit 89 98
o Pseudomonas fluorescens SBW25 PFLU_RS23815 GGDEF and EAL domain-containing protein cofit 87 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23815 GGDEF and EAL domain-containing protein strong 87 98
o Pseudomonas simiae WCS417 PS417_22190 diguanylate cyclase strong 87 98
o Pseudomonas orientalis W4I3 QF045_RS24325 EAL domain-containing protein cofit 87 98
o Pseudomonas syringae pv. syringae B728a Psyr_4060 diguanylate cyclase/phosphodiesterase insig. 86 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4060 diguanylate cyclase/phosphodiesterase insig. 86 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04574 hypothetical protein cofit 87 98
o Pseudomonas sp. S08-1 OH686_07220 c-di-GMP phosphodiesterase cofit 84 98
o Pseudomonas segetis P6 ACVTMO_RS18635 putative bifunctional diguanylate cyclase/phosphodiesterase strong 83 98
o Pseudomonas aeruginosa MRSN321 DY961_RS24655 bifA;inference=COORDINATES cyclic-di-GMP phosphodiesterase BifA cofit 83 98
o Pseudomonas aeruginosa PA14 IKLFDK_02265 cyclic-di-GMP phosphodiesterase BifA sig. 83 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS57105 bifA;inference=COORDINATES cyclic-di-GMP phosphodiesterase BifA cofit 83 98
o Pseudomonas stutzeri RCH2 Psest_1163 diguanylate cyclase (GGDEF) domain strong 72 97
o Marinobacter adhaerens HP15 HP15_2352 sensory box sensor/GGDEF/EAL domain protein insig. 45 97
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 63
o Shewanella amazonensis SB2B Sama_0965 GGDEF domain-containing protein (RefSeq) sig. 33 95
o Shewanella loihica PV-4 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 33 98
o Azospirillum sp. SherDot2 MPMX19_05708 hypothetical protein insig. 35 96
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 43 64
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 46 62
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 65
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 44 63
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 43 62
  Methylophilus sp. DMC18 GFF247 hypothetical protein insig. 43 62
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 43 63
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 61
  Shewanella oneidensis MR-1 SO1208 GGDEF domain protein (NCBI ptt file) strong 33 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 64
  Kangiella aquimarina DSM 16071 B158DRAFT_0955 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 41 66
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 63
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 41 67
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 43 64
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 42 64
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 44 63
  Pseudomonas aeruginosa PA14 IKLFDK_08335 Uncharacterized signaling protein PA1727 sig. 43 62
  Enterobacter sp. TBS_079 MPMX20_04172 putative signaling protein insig. 44 63
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 44 63
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 43 65
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 62
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 45 63
  Ralstonia sp. UNC404CL21Col ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 61
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 44 64
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 44 64
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 40 67
  Shewanella sp. ANA-3 Shewana3_1034 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 33 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 44 63
  Pseudomonas aeruginosa PUPa3 DQ20_RS54400 bifunctional diguanylate cyclase/phosphodiesterase cofit 43 62
  Pseudomonas segetis P6 ACVTMO_RS15975 putative bifunctional diguanylate cyclase/phosphodiesterase sig. 43 63
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 45 63
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 44 65
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 42 62
  Methylophilus sp. DMC18 GFF1755 hypothetical protein insig. 42 63
  Pseudomonas aeruginosa MRSN321 DY961_RS20305 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 62
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 44 64
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 62
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 45 62
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 43 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 43 63
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 42 64
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 44 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 43 62
  Enterobacter asburiae PDN3 EX28DRAFT_3316 diguanylate cyclase (GGDEF) domain insig. 43 62
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 44 63
  Cupriavidus basilensis FW507-4G11 RR42_RS09980 diguanylate phosphodiesterase insig. 42 63
  Caulobacter crescentus NA1000 CCNA_00777 PAS family GGDEF/EAL protein cofit 41 70
  Caulobacter crescentus NA1000 Δfur CCNA_00777 PAS family GGDEF/EAL protein cofit 41 70
  Kangiella aquimarina DSM 16071 B158DRAFT_2237 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 40 63
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 44 62
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 43 65
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 61
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 63
  Kangiella aquimarina DSM 16071 B158DRAFT_2502 periplasmic sensor diguanylate cyclase/phosphodiesterase insig. 43 61
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 41 63
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 40 61
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 42 68
  Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 43 62
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 43 62
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 43 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 43 61
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 42 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 42 62
  Acidovorax sp. GW101-3H11 Ac3H11_446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 41 68
  Pantoea sp. MT58 IAI47_03280 EAL domain-containing protein insig. 40 62
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 40 65
  Caulobacter crescentus NA1000 CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 39 71
  Caulobacter crescentus NA1000 Δfur CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 39 71
  Pseudomonas orientalis W4I3 QF045_RS03990 EAL domain-containing protein cofit 44 61