Homologs of MPMX19_01492 from Azospirillum sp. SherDot2

RNA polymerase-binding transcription factor DksA
SEED: C4-type zinc finger protein, DksA/TraR family
KEGG: DnaK suppressor protein

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Azospirillum sp. SherDot2 MPMX19_01492 RNA polymerase-binding transcription factor DksA insig. 100 100
o Azospirillum brasilense Sp245 AZOBR_RS11245 molecular chaperone DnaK no data 94 100
o Magnetospirillum magneticum AMB-1 AMB_RS19350 RNA polymerase-binding protein DksA no data 81 97
o Rhodospirillum rubrum S1H Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) cofit 75 96
o Dinoroseobacter shibae DFL-12 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) no data 70 97
o Rhizobium sp. OAE497 ABIE40_RS10345 RNA polymerase-binding protein DksA strong 64 100
o Sphingobium sp. HT1-2 GFF2254 DksA family protein PA5536 (no Zn-finger) strong 64 96
o Phaeobacter inhibens DSM 17395 PGA1_c11040 dnaK suppressor protein DksA strong 65 97
o Xanthobacter sp. DMC5 GFF1254 RNA polymerase-binding transcription factor DksA no data 66 96
o Bosea sp. OAE506 ABIE41_RS13460 RNA polymerase-binding protein DksA strong 66 97
o Agrobacterium fabrum C58 Atu1359 dnaK deletion suppressor protein strong 62 100
o Rhodopseudomonas palustris CGA009 TX73_020255 RNA polymerase-binding protein DksA strong 64 95
o Sinorhizobium meliloti 1021 SMc00469 DnaK suppressor protein no data 65 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0274 transcriptional regulator, TraR/DksA family strong 60 96
o Caulobacter crescentus NA1000 CCNA_02663 DnaK suppressor protein DksA strong 66 85
o Caulobacter crescentus NA1000 Δfur CCNA_02663 DnaK suppressor protein DksA cofit 66 85
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08530 RNA polymerase-binding protein DksA strong 65 94
  Rhodanobacter sp. FW510-T8 OKGIIK_09500 dksA RNA polymerase-binding protein DksA insig. 57 96
  Rhodanobacter denitrificans MT42 LRK55_RS02195 RNA polymerase-binding protein DksA no data 56 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02440 RNA polymerase-binding protein DksA strong 56 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07505 RNA polymerase-binding protein DksA no data 56 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08750 RNA polymerase-binding protein DksA no data 55 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2307.1 C4-type zinc finger protein, DksA/TraR family no data 53 97
  Lysobacter sp. OAE881 ABIE51_RS13450 RNA polymerase-binding protein DksA no data 50 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF550 C4-type zinc finger protein, DksA/TraR family sig. 55 83
  Acinetobacter radioresistens SK82 MPMX26_00177 RNA polymerase-binding transcription factor DksA strong 49 84
  Acinetobacter baumannii LAC-4 RR41_RS17730 RNA polymerase-binding protein DksA no data 49 84
  Variovorax sp. OAS795 ABID97_RS06170 RNA polymerase-binding protein DksA no data 53 83
o Ralstonia sp. UNC404CL21Col ABZR87_RS05100 RNA polymerase-binding protein DksA strong 48 89
  Variovorax sp. SCN45 GFF4486 DksA family protein PA5536 (no Zn-finger) no data 53 83
  Acidovorax sp. GW101-3H11 Ac3H11_2002 C4-type zinc finger protein, DksA/TraR family insig. 51 83
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09645 RNA polymerase-binding protein DksA strong 49 86
o Ralstonia solanacearum UW163 UW163_RS03935 RNA polymerase-binding protein DksA insig. 49 86
o Paraburkholderia graminis OAS925 ABIE53_000423 DnaK suppressor protein strong 53 83
o Ralstonia solanacearum PSI07 RPSI07_RS23720 RNA polymerase-binding protein DksA strong 50 89
o Ralstonia solanacearum GMI1000 RS_RS00230 RNA polymerase-binding protein DksA cofit 48 86
o Burkholderia phytofirmans PsJN BPHYT_RS01640 molecular chaperone DnaK no data 52 83
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02205 transcriptional regulator, TraR/DksA family insig. 52 83
o Cupriavidus basilensis FW507-4G11 RR42_RS01030 molecular chaperone DnaK no data 52 83
o Paraburkholderia sabiae LMG 24235 QEN71_RS00340 RNA polymerase-binding protein DksA no data 51 83
  Castellaniella sp019104865 MT123 ABCV34_RS13420 RNA polymerase-binding protein DksA no data 50 83
o Methylophilus sp. DMC18 GFF2238 RNA polymerase-binding transcription factor DksA no data 46 90
o Pseudomonas sp. BP01 JOY50_RS27695 dksA RNA polymerase-binding protein DksA cofit 44 91
o Pseudomonas putida KT2440 PP_4693 RNA polymerase-binding transcription factor DksA strong 44 91
o Marinobacter adhaerens HP15 HP15_332 transcriptional regulator, TraR/DksA family no data 43 91
  Pseudomonas stutzeri RCH2 Psest_1003 RNA polymerase-binding protein DksA no data 46 84
  Pseudomonas segetis P6 MPMX49_01257 RNA polymerase-binding transcription factor DksA no data 47 84
  Pseudomonas sp. RS175 PFR28_03714 RNA polymerase-binding transcription factor DksA strong 45 84
o Pseudomonas sp. SVBP6 COO64_RS15070 dksA RNA polymerase-binding protein DksA cofit 44 90
  Pseudomonas sp. S08-1 OH686_17280 RNA polymerase-binding protein DksA no data 45 84
o Pseudomonas aeruginosa PA14 IKLFDK_30000 RNA polymerase-binding protein DksA strong 44 91
o Dechlorosoma suillum PS Dsui_2717 RNA polymerase-binding protein DksA strong 45 90
o Pseudomonas fluorescens SBW25 PFLU_RS25715 RNA polymerase-binding protein DksA strong 44 84
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25715 RNA polymerase-binding protein DksA strong 44 84
  Pseudomonas fluorescens FW300-N2C3 AO356_16095 molecular chaperone DnaK strong 44 84
  Pseudomonas simiae WCS417 PS417_23875 molecular chaperone DnaK no data 44 84
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04926 RNA polymerase-binding transcription factor DksA strong 44 84
  Kangiella aquimarina DSM 16071 B158DRAFT_0056 transcriptional regulator, TraR/DksA family strong 44 84
o Pseudomonas syringae pv. syringae B728a Psyr_0835 transcriptional regulator, TraR/DksA family strong 44 84
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0835 transcriptional regulator, TraR/DksA family strong 44 84
o Herbaspirillum seropedicae SmR1 HSERO_RS00840 molecular chaperone DnaK no data 47 84
  Pseudomonas fluorescens FW300-N2E3 AO353_14420 molecular chaperone DnaK strong 44 84
o Pseudomonas sp. DMC3 GFF4034 RNA polymerase-binding transcription factor DksA strong 43 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family insig. 44 84
  Pseudomonas aeruginosa PA14 IKLFDK_25730 RNA polymerase-binding protein DksA no data 48 90
o Alteromonas macleodii MIT1002 MIT1002_03690 DnaK suppressor protein strong 43 86
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family no data 43 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1993 C4-type zinc finger protein, DksA/TraR family insig. 47 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15060 dksA RNA polymerase-binding protein DksA no data 43 84
  Erwinia tracheiphila SCR3 LU632_RS20080 dksA RNA polymerase-binding protein DksA no data 43 84
  Erwinia amylovora T8 OLJFJH_00765 RNA polymerase-binding protein DksA no data 43 84
o Shewanella loihica PV-4 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) no data 41 90
  Serratia liquefaciens MT49 IAI46_21210 RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli BL21 ECD_00144 transcriptional regulator of rRNA transcription; DnaK suppressor protein no data 43 84
  Escherichia fergusonii Becca EFB2_03899 RNA polymerase-binding transcription factor DksA strong 43 84
  Escherichia coli ECOR27 NOLOHH_02690 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECOR38 HEPCGN_08295 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECRC100 OKFHMN_10345 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECRC101 MCAODC_00860 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECRC102 NIAGMN_08195 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECRC62 BNILDI_08980 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECRC98 JDDGAC_13940 dksA RNA polymerase-binding protein DksA strong 43 84
  Escherichia coli ECRC99 KEDOAH_17810 dksA RNA polymerase-binding protein DksA no data 43 84
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03517 RNA polymerase-binding transcription factor DksA sig. 43 84
  Escherichia coli Nissle 1917 ECOLIN_RS00800 RNA polymerase-binding protein DksA no data 43 84
  Escherichia coli Nissle 1917 ECOLIN_RS00815 RNA polymerase-binding protein DksA no data 43 84
  Escherichia coli BW25113 b0145 dksA DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) strong 43 84
  Pantoea sp. MT58 IAI47_15635 RNA polymerase-binding protein DksA strong 42 84
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13365 RNA polymerase-binding protein DksA strong 42 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5160 C4-type zinc finger protein, DksA/TraR family strong 44 78
  Dickeya dadantii 3937 DDA3937_RS15935 RNA polymerase-binding protein DksA no data 43 84
o Shewanella amazonensis SB2B Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) strong 42 90
  Klebsiella pneumoniae MKP103 KDGMDA_13270 RNA polymerase-binding protein DksA sig. 42 84
  Enterobacter asburiae PDN3 EX28DRAFT_3734 transcriptional regulator, TraR/DksA family no data 42 84
  Enterobacter sp. TBS_079 MPMX20_00831 RNA polymerase-binding transcription factor DksA strong 42 84
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF87 C4-type zinc finger protein, DksA/TraR family insig. 42 84
  Rahnella sp. WP5 EX31_RS03250 RNA polymerase-binding protein DksA strong 41 86
  Dickeya dianthicola 67-19 HGI48_RS16050 RNA polymerase-binding protein DksA insig. 42 84
  Dickeya dianthicola ME23 DZA65_RS17135 RNA polymerase-binding protein DksA no data 42 84
  Pseudomonas sp. S08-1 OH686_23510 RNA polymerase-binding protein DksA insig. 45 87