Homologs of GFF8 from Xanthobacter sp. DMC5

DNA-directed RNA polymerase subunit beta
SEED: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF8 DNA-directed RNA polymerase subunit beta no data 100 100
o Rhodopseudomonas palustris CGA009 TX73_016895 DNA-directed RNA polymerase subunit beta no data 86 100
o Bosea sp. OAE506 ABIE41_RS14500 DNA-directed RNA polymerase subunit beta no data 83 100
o Sinorhizobium meliloti 1021 SMc01317 DNA-directed RNA polymerase subunit beta no data 81 100
o Agrobacterium fabrum C58 Atu1956 DNA-directed RNA polymerase beta chain no data 80 100
o Rhizobium sp. OAE497 ABIE40_RS07795 DNA-directed RNA polymerase subunit beta no data 81 100
o Magnetospirillum magneticum AMB-1 AMB_RS15815 DNA-directed RNA polymerase subunit beta no data 74 100
o Caulobacter crescentus NA1000 CCNA_00536 DNA-directed RNA polymerase beta chain no data 76 100
o Caulobacter crescentus NA1000 Δfur CCNA_00536 DNA-directed RNA polymerase beta chain no data 76 100
o Azospirillum brasilense Sp245 AZOBR_RS11510 DNA-directed RNA polymerase subunit beta no data 74 100
o Rhodospirillum rubrum S1H Rru_A2695 DNA-directed RNA polymerase, beta subunit (NCBI) no data 74 100
o Azospirillum sp. SherDot2 MPMX19_00385 DNA-directed RNA polymerase subunit beta no data 73 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08085 DNA-directed RNA polymerase subunit beta no data 75 100
o Sphingobium sp. HT1-2 GFF2911 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 73 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0782 DNA-directed RNA polymerase, beta subunit no data 73 100
o Dinoroseobacter shibae DFL-12 Dshi_0268 DNA-directed RNA polymerase, beta subunit (RefSeq) no data 72 100
o Phaeobacter inhibens DSM 17395 PGA1_c01430 DNA-directed RNA polymerase subunit beta no data 72 100
o Lysobacter sp. OAE881 ABIE51_RS05805 DNA-directed RNA polymerase subunit beta no data 61 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21940 DNA-directed RNA polymerase subunit beta no data 61 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4152.1 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 60 100
o Pseudomonas sp. S08-1 OH686_15320 DNA-directed RNA polymerase, beta subunit no data 61 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS43925 rpoB;go_component=cytosolic DNA-directed RNA polymerase subunit beta no data 61 100
o Marinobacter adhaerens HP15 HP15_373 DNA-directed RNA polymerase subunit beta no data 59 100
o Pseudomonas aeruginosa MRSN321 DY961_RS29590 rpoB;go_component=cytosolic DNA-directed RNA polymerase subunit beta no data 61 100
o Pseudomonas aeruginosa PA14 IKLFDK_21975 DNA-directed RNA polymerase subunit beta no data 61 100
o Rhodanobacter sp. FW510-T8 OKGIIK_10500 rpoB DNA-directed RNA polymerase subunit beta no data 60 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06335 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas segetis P6 ACVTMO_RS04605 rpoB DNA-directed RNA polymerase subunit beta no data 61 100
o Rhodanobacter denitrificans MT42 LRK55_RS03360 DNA-directed RNA polymerase subunit beta no data 60 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03610 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas sp. RS175 PFR28_04009 DNA-directed RNA polymerase subunit beta no data 61 100
o Pseudomonas putida KT2440 PP_0447 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas fluorescens FW300-N2C3 AO356_14610 DNA-directed RNA polymerase subunit beta no data 61 100
o Pseudomonas stutzeri RCH2 Psest_3613 DNA-directed RNA polymerase, beta subunit no data 61 100
o Pseudomonas sp. SVBP6 COO64_RS16255 rpoB DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4851 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 61 100
o Ralstonia solanacearum PSI07 RPSI07_RS09980 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas sp. BP01 JOY50_RS28245 rpoB DNA-directed RNA polymerase subunit beta no data 60 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS02925 DNA-directed RNA polymerase subunit beta no data 60 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07265 DNA-directed RNA polymerase subunit beta no data 60 100
o Ralstonia solanacearum UW163 UW163_RS06355 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas fluorescens SBW25 PFLU_RS27200 DNA-directed RNA polymerase subunit beta no data 61 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27200 DNA-directed RNA polymerase subunit beta no data 61 100
o Cupriavidus basilensis FW507-4G11 RR42_RS19320 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas orientalis W4I3 QF045_RS27595 DNA-directed RNA polymerase subunit beta no data 61 100
o Pseudomonas fluorescens FW300-N2E3 AO353_07035 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2575 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 60 100
o Ralstonia solanacearum GMI1000 RS_RS15200 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1247 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 60 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1869 DNA-directed RNA polymerase, beta subunit no data 60 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05229 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas sp. DMC3 GFF3757 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas simiae WCS417 PS417_25570 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas syringae pv. syringae B728a Psyr_4555 DNA-directed RNA polymerase subunit beta no data 60 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4555 DNA-directed RNA polymerase subunit beta no data 60 100
o Herbaspirillum seropedicae SmR1 HSERO_RS00525 DNA-directed RNA polymerase subunit beta no data 59 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1793 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 58 100
o Serratia liquefaciens MT49 IAI46_01260 DNA-directed RNA polymerase subunit beta no data 59 100
o Variovorax sp. OAS795 ABID97_RS05345 DNA-directed RNA polymerase subunit beta no data 59 100
o Rahnella sp. WP5 EX31_RS16780 DNA-directed RNA polymerase subunit beta no data 59 100
o Variovorax sp. SCN45 GFF5881 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 58 100
o Acinetobacter radioresistens SK82 MPMX26_00212 DNA-directed RNA polymerase subunit beta no data 60 100
o Pantoea sp. MT58 IAI47_18110 DNA-directed RNA polymerase subunit beta no data 59 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS28305 DNA-directed RNA polymerase subunit beta no data 59 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22645 DNA-directed RNA polymerase subunit beta no data 59 100
o Paraburkholderia graminis OAS925 ABIE53_003794 DNA-directed RNA polymerase subunit beta no data 59 100
o Acidovorax sp. GW101-3H11 Ac3H11_4458 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 58 100
o Enterobacter asburiae PDN3 EX28DRAFT_4526 DNA-directed RNA polymerase, beta subunit no data 59 100
o Acinetobacter baumannii LAC-4 RR41_RS17545 DNA-directed RNA polymerase subunit beta no data 59 100
o Shewanella oneidensis MR-1 SO0224 rpoB DNA-directed RNA polymerase, beta subunit (NCBI ptt file) no data 59 100
o Burkholderia phytofirmans PsJN BPHYT_RS18155 DNA-directed RNA polymerase subunit beta no data 58 100
o Enterobacter sp. TBS_079 MPMX20_00207 DNA-directed RNA polymerase subunit beta no data 59 100
o Alteromonas macleodii MIT1002 MIT1002_03733 DNA-directed RNA polymerase subunit beta no data 59 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4211 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) no data 59 100
o Klebsiella michiganensis M5al BWI76_RS01500 DNA-directed RNA polymerase subunit beta no data 58 100
o Escherichia coli BL21 ECD_03863 RNA polymerase, beta subunit no data 59 100
o Escherichia fergusonii Becca EFB2_04624 DNA-directed RNA polymerase subunit beta no data 59 100
o Escherichia coli ECOR27 NOLOHH_05565 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECOR38 HEPCGN_12070 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECRC100 OKFHMN_13420 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECRC101 MCAODC_03920 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECRC102 NIAGMN_11170 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECRC62 BNILDI_05960 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECRC98 JDDGAC_17045 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli ECRC99 KEDOAH_14740 rpoB_R687H DNA-directed RNA polymerase subunit beta RpoB no data 59 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04064 DNA-directed RNA polymerase subunit beta no data 59 100
o Escherichia coli Nissle 1917 ECOLIN_RS23005 DNA-directed RNA polymerase subunit beta no data 59 100
o Escherichia coli BW25113 b3987 rpoB DNA-directed RNA polymerase subunit beta (NCBI) no data 59 100
o Shewanella sp. ANA-3 Shewana3_0192 rpoB DNA-directed RNA polymerase subunit beta (RefSeq) no data 59 100
o Erwinia amylovora T8 OLJFJH_06680 DNA-directed RNA polymerase subunit beta no data 59 100
o Pectobacterium carotovorum WPP14 HER17_RS20430 DNA-directed RNA polymerase subunit beta no data 58 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06593 DNA-directed RNA polymerase subunit beta no data 58 100
o Dickeya dianthicola 67-19 HGI48_RS01090 DNA-directed RNA polymerase subunit beta no data 59 100
o Dickeya dianthicola ME23 DZA65_RS01160 DNA-directed RNA polymerase subunit beta no data 59 100
o Dickeya dadantii 3937 DDA3937_RS01100 DNA-directed RNA polymerase subunit beta no data 59 100
o Klebsiella pneumoniae MKP103 KDGMDA_09985 DNA-directed RNA polymerase subunit beta no data 59 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_10840 rpoB DNA-directed RNA polymerase subunit beta no data 59 100
o Erwinia tracheiphila SCR3 LU632_RS00930 rpoB DNA-directed RNA polymerase subunit beta no data 59 100
o Shewanella loihica PV-4 Shew_0151 DNA-directed RNA polymerase, beta subunit (RefSeq) no data 58 100
o Shewanella amazonensis SB2B Sama_0206 rpoB DNA-directed RNA polymerase subunit beta (RefSeq) no data 59 100