Homologs of GFF3854 from Hydrogenophaga sp. GW460-11-11-14-LB1

Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
SEED: Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
KEGG: peptidyl-prolyl cis-trans isomerase D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3854 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) insig. 100 100
o Acidovorax sp. GW101-3H11 Ac3H11_377 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) no data 56 99
o Variovorax sp. OAS795 ABID97_RS10675 SurA N-terminal domain-containing protein strong 52 99
o Variovorax sp. SCN45 GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) cofit 51 99
o Cupriavidus basilensis FW507-4G11 RR42_RS09045 peptidylprolyl isomerase strong 44 100
o Ralstonia solanacearum GMI1000 RS_RS08675 peptidyl-prolyl cis-trans isomerase strong 42 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01320 peptidylprolyl isomerase strong 42 98
o Ralstonia solanacearum UW163 UW163_RS14630 peptidylprolyl isomerase insig. 42 98
o Ralstonia solanacearum PSI07 RPSI07_RS16155 peptidylprolyl isomerase sig. 42 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS12765 SurA N-terminal domain-containing protein cofit 42 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS21955 SurA N-terminal domain-containing protein strong 41 98
o Herbaspirillum seropedicae SmR1 HSERO_RS11155 peptidyl-prolyl cis-trans isomerase strong 43 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00902 peptidyl-prolyl cis-trans isomerase D strong 39 98
o Burkholderia phytofirmans PsJN BPHYT_RS09480 peptidyl-prolyl cis-trans isomerase insig. 39 98
o Paraburkholderia graminis OAS925 ABIE53_002134 peptidyl-prolyl cis-trans isomerase D strong 39 98
o Dechlorosoma suillum PS Dsui_2202 parvulin-like peptidyl-prolyl isomerase strong 39 98
o Castellaniella sp019104865 MT123 ABCV34_RS03085 SurA N-terminal domain-containing protein no data 34 98
o Marinobacter adhaerens HP15 HP15_2181 PpiC-type peptidyl-prolyl cis-trans isomerase strong 33 84
o Shewanella oneidensis MR-1 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) strong 30 98
o Shewanella sp. ANA-3 Shewana3_2657 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) sig. 29 98
o Rhodanobacter sp. FW510-T8 OKGIIK_08010 Peptidylprolyl isomerase strong 29 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16755 SurA N-terminal domain-containing protein strong 29 98
  Alteromonas macleodii MIT1002 MIT1002_02755 Peptidyl-prolyl cis-trans isomerase D strong 33 78
o Rhodanobacter denitrificans MT42 LRK55_RS16480 SurA N-terminal domain-containing protein strong 29 98
o Shewanella amazonensis SB2B Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) sig. 28 95
o Shewanella loihica PV-4 Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) strong 28 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07300 SurA N-terminal domain-containing protein strong 31 96
o Pseudomonas sp. RS175 PFR28_01231 Peptidyl-prolyl cis-trans isomerase D sig. 29 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3949 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) no data 29 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2214 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) no data 29 95
o Pseudomonas stutzeri RCH2 Psest_2283 Parvulin-like peptidyl-prolyl isomerase no data 29 91
o Pseudomonas fluorescens FW300-N2C3 AO356_01725 peptidylprolyl isomerase no data 29 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2556 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) sig. 29 95
o Pseudomonas fluorescens FW300-N2E3 AO353_20200 peptidylprolyl isomerase strong 28 95
o Lysobacter sp. OAE881 ABIE51_RS14120 peptidyl-prolyl cis-trans isomerase strong 31 96
o Pseudomonas fluorescens SBW25 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase no data 29 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19150 peptidyl-prolyl cis-trans isomerase no data 29 95
o Pseudomonas syringae pv. syringae B728a Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase strong 28 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase strong 28 98
o Pseudomonas sp. S08-1 OH686_03625 Peptidyl-prolyl cis-trans isomerase PpiD strong 29 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4039.1 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) sig. 30 90
o Pseudomonas simiae WCS417 PS417_17215 peptidylprolyl isomerase strong 29 95
o Desulfovibrio vulgaris Miyazaki F DvMF_3022 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) sig. 30 80
o Vibrio cholerae E7946 ATCC 55056 CSW01_09595 peptidylprolyl isomerase insig. 30 82
o Pseudomonas putida KT2440 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D strong 29 83
o Enterobacter asburiae PDN3 EX28DRAFT_2529 Parvulin-like peptidyl-prolyl isomerase cofit 28 98
o Rahnella sp. WP5 EX31_RS22265 peptidylprolyl isomerase cofit 30 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU1065 peptidyl-prolyl cis-trans isomerse domain protein (TIGR) sig. 29 80
o Enterobacter sp. TBS_079 MPMX20_01032 Peptidyl-prolyl cis-trans isomerase D insig. 27 98
o Pectobacterium carotovorum WPP14 HER17_RS15830 peptidylprolyl isomerase cofit 27 82
o Pantoea sp. MT58 IAI47_14635 peptidylprolyl isomerase insig. 26 91
o Dickeya dadantii 3937 DDA3937_RS05660 peptidylprolyl isomerase sig. 27 82
o Dickeya dianthicola ME23 DZA65_RS06030 peptidylprolyl isomerase cofit 27 82
o Dickeya dianthicola 67-19 HGI48_RS05705 peptidylprolyl isomerase cofit 27 82
o Escherichia coli ECOR27 NOLOHH_01245 ppiD peptidylprolyl isomerase insig. 25 98
o Escherichia fergusonii Becca EFB2_03616 Peptidyl-prolyl cis-trans isomerase D insig. 25 98
o Escherichia coli ECRC100 OKFHMN_08310 ppiD peptidylprolyl isomerase cofit 25 98
o Escherichia coli ECRC101 MCAODC_27535 ppiD peptidylprolyl isomerase insig. 25 98
o Escherichia coli ECRC102 NIAGMN_06365 ppiD peptidylprolyl isomerase insig. 25 98
o Escherichia coli ECRC62 BNILDI_22660 ppiD peptidylprolyl isomerase cofit 25 98
o Escherichia coli ECRC98 JDDGAC_11965 ppiD peptidylprolyl isomerase cofit 25 98
o Escherichia coli ECRC99 KEDOAH_19655 ppiD peptidylprolyl isomerase no data 25 98
o Escherichia coli Nissle 1917 ECOLIN_RS02645 peptidylprolyl isomerase cofit 25 98
o Escherichia coli BW25113 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) strong 25 98
o Klebsiella michiganensis M5al BWI76_RS06545 peptidylprolyl isomerase sig. 25 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03232 Peptidyl-prolyl cis-trans isomerase D cofit 25 98
o Escherichia coli BL21 ECD_00393 periplasmic folding chaperone, has an inactive PPIase domain cofit 25 98
o Escherichia coli ECOR38 HEPCGN_06925 ppiD peptidylprolyl isomerase cofit 25 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) insig. 27 94
o Serratia liquefaciens MT49 IAI46_05030 peptidylprolyl isomerase cofit 28 77
o Kangiella aquimarina DSM 16071 B158DRAFT_1042 Parvulin-like peptidyl-prolyl isomerase strong 26 86
o Caulobacter crescentus NA1000 CCNA_01971 peptidyl-prolyl cis-trans isomerase strong 27 93
o Caulobacter crescentus NA1000 Δfur CCNA_01971 peptidyl-prolyl cis-trans isomerase cofit 27 93
o Acinetobacter radioresistens SK82 MPMX26_01332 Peptidyl-prolyl cis-trans isomerase D strong 24 97
o Erwinia tracheiphila SCR3 LU632_RS18325 ppiD peptidylprolyl isomerase insig. 25 79
o Azospirillum brasilense Sp245 AZOBR_RS07495 peptidylprolyl isomerase strong 26 83
o Dinoroseobacter shibae DFL-12 Dshi_1795 putative peptidyl-prolyl cis-trans isomerse D (RefSeq) no data 28 91
o Magnetospirillum magneticum AMB-1 AMB_RS09180 peptidylprolyl isomerase no data 26 85
o Azospirillum sp. SherDot2 MPMX19_00894 Peptidyl-prolyl cis-trans isomerase D no data 24 98
  Rhodopseudomonas palustris CGA009 TX73_014975 SurA N-terminal domain-containing protein sig. 24 81
  Rhodopseudomonas palustris CGA009 TX73_002650 peptidylprolyl isomerase insig. 37 26
  Bosea sp. OAE506 ABIE41_RS05770 peptidylprolyl isomerase insig. 36 23
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18395 peptidylprolyl isomerase no data 31 56
  Herbaspirillum seropedicae SmR1 HSERO_RS11200 peptidyl-prolyl cis-trans isomerase sig. 38 23
  Cupriavidus basilensis FW507-4G11 RR42_RS11180 peptidylprolyl isomerase sig. 35 25
  Rhizobium sp. OAE497 ABIE40_RS17390 peptidylprolyl isomerase strong 39 21
  Azospirillum brasilense Sp245 AZOBR_RS02860 peptidylprolyl isomerase sig. 36 22
  Dickeya dadantii 3937 DDA3937_RS18830 nitrogen fixation protein NifM insig. 35 19
  Variovorax sp. SCN45 GFF1326 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) insig. 35 23
  Dickeya dianthicola 67-19 HGI48_RS18835 nitrogen fixation protein NifM strong 35 19
  Ralstonia sp. UNC404CL21Col ABZR87_RS12650 peptidylprolyl isomerase cofit 34 24
  Magnetospirillum magneticum AMB-1 AMB_RS02630 parvulin peptidyl-prolyl isomerase no data 33 27
  Sinorhizobium meliloti 1021 SMc02451 hypothetical protein insig. 41 21
  Variovorax sp. OAS795 ABID97_RS15680 peptidylprolyl isomerase cofit 36 22
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0634 Parvulin-like peptidyl-prolyl isomerase strong 47 16
  Paraburkholderia sabiae LMG 24235 QEN71_RS21915 peptidylprolyl isomerase strong 35 25
  Dickeya dianthicola ME23 DZA65_RS19945 nitrogen fixation protein NifM no data 35 22
  Bosea sp. OAE506 ABIE41_RS15735 SurA N-terminal domain-containing protein insig. 24 66
  Acidovorax sp. GW101-3H11 Ac3H11_2538 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) no data 32 23
  Dinoroseobacter shibae DFL-12 Dshi_3566 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) sig. 34 23