Homologs of PS417_18565 from Pseudomonas simiae WCS417

pseudouridine synthase
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_18565 pseudouridine synthase no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA sig. 99 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA strong 99 100
o Pseudomonas orientalis W4I3 QF045_RS20705 tRNA pseudouridine(38-40) synthase TruA insig. 98 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03941 tRNA pseudouridine synthase A cofit 97 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3941 tRNA pseudouridine synthase A (EC 4.2.1.70) strong 94 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_70 tRNA pseudouridine synthase A (EC 4.2.1.70) strong 94 100
o Pseudomonas fluorescens FW300-N2C3 AO356_21435 pseudouridine synthase strong 94 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_7 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20660 pseudouridine synthase strong 92 100
o Pseudomonas sp. RS175 PFR28_02817 tRNA pseudouridine synthase A strong 92 100
o Pseudomonas syringae pv. syringae B728a Psyr_1662 tRNA pseudouridine synthase sig. 90 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1662 tRNA pseudouridine synthase insig. 90 100
o Pseudomonas sp. DMC3 GFF792 tRNA pseudouridine synthase A cofit 88 100
o Pseudomonas sp. SVBP6 COO64_RS05630 truA tRNA pseudouridine(38-40) synthase TruA insig. 86 100
o Pseudomonas putida KT2440 PP_1994 tRNA pseudouridine (38-40)synthase strong 76 99
o Pseudomonas sp. BP01 JOY50_RS16595 truA tRNA pseudouridine(38-40) synthase TruA sig. 75 99
o Pseudomonas aeruginosa MRSN321 DY961_RS01355 truA;go_function=pseudouridine tRNA pseudouridine(38-40) synthase TruA strong 75 99
o Pseudomonas aeruginosa PA14 IKLFDK_15845 tRNA pseudouridine(38-40) synthase TruA strong 75 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS34200 truA;go_function=pseudouridine tRNA pseudouridine(38-40) synthase TruA sig. 75 99
o Pseudomonas sp. S08-1 OH686_04450 tRNA pseudouridine(38-40) synthase strong 74 100
o Pseudomonas stutzeri RCH2 Psest_2585 pseudouridylate synthase I insig. 74 99
o Pseudomonas segetis P6 MPMX49_03067 tRNA pseudouridine synthase A strong 73 99
o Escherichia fergusonii Becca EFB2_01540 tRNA pseudouridine synthase A strong 56 95
o Erwinia amylovora T8 OLJFJH_11240 tRNA pseudouridine(38-40) synthase TruA strong 56 95
o Escherichia coli ECRC62 BNILDI_13225 truA tRNA pseudouridine(38-40) synthase TruA cofit 55 95
o Escherichia coli ECOR38 HEPCGN_21875 truA aspartate-semialdehyde dehydrogenase strong 55 95
o Escherichia coli ECRC100 OKFHMN_22670 truA aspartate-semialdehyde dehydrogenase strong 55 95
o Escherichia coli ECRC101 MCAODC_13710 truA aspartate-semialdehyde dehydrogenase strong 55 95
o Escherichia coli ECRC102 NIAGMN_20445 truA aspartate-semialdehyde dehydrogenase strong 55 95
o Escherichia coli ECRC98 JDDGAC_26630 truA aspartate-semialdehyde dehydrogenase no data 55 95
o Escherichia coli ECRC99 KEDOAH_05525 truA aspartate-semialdehyde dehydrogenase no data 55 95
o Escherichia coli Nissle 1917 ECOLIN_RS13435 tRNA pseudouridine(38-40) synthase TruA sig. 55 95
o Enterobacter sp. TBS_079 MPMX20_03253 tRNA pseudouridine synthase A strong 56 95
o Enterobacter asburiae PDN3 EX28DRAFT_0286 tRNA pseudouridine(38-40) synthase insig. 55 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1934 tRNA pseudouridine synthase A (EC 4.2.1.70) strong 55 96
o Klebsiella pneumoniae MKP103 KDGMDA_27215 tRNA pseudouridine(38-40) synthase TruA strong 56 95
o Escherichia coli BW25113 b2318 truA tRNA pseudouridine synthase A (NCBI) strong 55 95
o Klebsiella michiganensis M5al BWI76_RS20380 tRNA pseudouridine(38-40) synthase TruA insig. 55 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_05090 tRNA pseudouridine(38-40) synthase TruA insig. 58 95
o Escherichia coli BL21 ECD_02243 tRNA pseudouridine(38-40) synthase no data 55 95
o Escherichia coli ECOR27 NOLOHH_14305 truA tRNA pseudouridine(38-40) synthase TruA strong 55 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01387 tRNA pseudouridine synthase A insig. 55 95
o Pectobacterium carotovorum WPP14 HER17_RS06990 tRNA pseudouridine(38-40) synthase TruA strong 57 95
o Serratia liquefaciens MT49 IAI46_17840 tRNA pseudouridine(38-40) synthase TruA strong 56 95
o Shewanella sp. ANA-3 Shewana3_1479 truA tRNA pseudouridine synthase A (RefSeq) strong 55 95
o Shewanella loihica PV-4 Shew_2306 tRNA pseudouridine synthase A (RefSeq) no data 55 95
o Shewanella amazonensis SB2B Sama_2150 truA tRNA pseudouridine synthase A (RefSeq) strong 54 95
o Rahnella sp. WP5 EX31_RS19600 tRNA pseudouridine(38-40) synthase TruA strong 54 95
o Dickeya dianthicola 67-19 HGI48_RS14435 tRNA pseudouridine(38-40) synthase TruA insig. 56 95
o Pantoea sp. MT58 IAI47_06245 tRNA pseudouridine(38-40) synthase TruA strong 54 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00200 tRNA pseudouridine(38-40) synthase TruA strong 54 97
o Dickeya dianthicola ME23 DZA65_RS15370 tRNA pseudouridine(38-40) synthase TruA strong 56 95
o Dickeya dadantii 3937 DDA3937_RS14465 tRNA pseudouridine(38-40) synthase TruA insig. 56 95
o Alteromonas macleodii MIT1002 MIT1002_02529 tRNA pseudouridine synthase A strong 55 95
o Marinobacter adhaerens HP15 HP15_1829 tRNA pseudouridine synthase A strong 53 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1483 pseudouridylate synthase I strong 53 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17875 truA tRNA pseudouridine(38-40) synthase TruA no data 54 96
o Erwinia tracheiphila SCR3 LU632_RS07825 truA tRNA pseudouridine(38-40) synthase TruA no data 54 96
o Acinetobacter baumannii LAC-4 RR41_RS16860 tRNA pseudouridine(38-40) synthase TruA sig. 50 95
o Acinetobacter radioresistens SK82 MPMX26_00352 tRNA pseudouridine synthase A strong 50 95
o Dechlorosoma suillum PS Dsui_3194 pseudouridylate synthase I strong 50 94
o Paraburkholderia graminis OAS925 ABIE53_004807 tRNA pseudouridine38-40 synthase strong 53 91
o Burkholderia phytofirmans PsJN BPHYT_RS33885 tRNA pseudouridine synthase A cofit 52 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06069 tRNA pseudouridine38-40 synthase sig. 50 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS17635 tRNA pseudouridine(38-40) synthase TruA cofit 49 91
o Herbaspirillum seropedicae SmR1 HSERO_RS16485 tRNA pseudouridine synthase A strong 44 93
o Acidovorax sp. GW101-3H11 Ac3H11_1532 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 46 92
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS08335 tRNA pseudouridine(38-40) synthase TruA no data 54 91
o Variovorax sp. SCN45 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) sig. 48 91
o Castellaniella sp019104865 MT123 ABCV34_RS04265 tRNA pseudouridine(38-40) synthase TruA strong 49 92
o Variovorax sp. OAS795 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA strong 47 91
o Rhodanobacter denitrificans MT42 LRK55_RS01480 tRNA pseudouridine(38-40) synthase TruA sig. 52 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01700 tRNA pseudouridine(38-40) synthase TruA strong 52 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3357 tRNA pseudouridine synthase A (EC 4.2.1.70) cofit 48 90
o Ralstonia solanacearum GMI1000 RS_RS09975 tRNA pseudouridine(38-40) synthase TruA insig. 49 91
o Ralstonia solanacearum PSI07 RPSI07_RS14720 tRNA pseudouridine(38-40) synthase TruA insig. 49 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS02595 tRNA pseudouridine(38-40) synthase TruA no data 48 91
o Ralstonia solanacearum UW163 UW163_RS11130 tRNA pseudouridine(38-40) synthase TruA no data 48 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1961.1 tRNA pseudouridine synthase A (EC 4.2.1.70) strong 49 91
o Lysobacter sp. OAE881 ABIE51_RS08245 tRNA pseudouridine(38-40) synthase TruA sig. 47 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS14510 tRNA pseudouridine(38-40) synthase TruA strong 49 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08015 tRNA pseudouridine(38-40) synthase TruA sig. 52 91
o Rhodanobacter sp. FW510-T8 OKGIIK_04830 truA tRNA pseudouridine(38-40) synthase TruA no data 54 91
o Methylophilus sp. DMC18 GFF654 tRNA pseudouridine synthase A insig. 44 91
o Cupriavidus basilensis FW507-4G11 RR42_RS14370 tRNA pseudouridine synthase A no data 44 91
o Magnetospirillum magneticum AMB-1 AMB_RS01225 tRNA pseudouridine(38-40) synthase TruA insig. 45 89
o Rhodospirillum rubrum S1H Rru_A3352 Pseudouridylate synthase (NCBI) no data 43 93
o Azospirillum brasilense Sp245 AZOBR_RS03570 tRNA pseudouridine synthase A no data 43 89
o Azospirillum sp. SherDot2 MPMX19_02005 tRNA pseudouridine synthase A no data 42 89
o Caulobacter crescentus NA1000 CCNA_00280 tRNA pseudouridine synthase A strong 43 89
o Caulobacter crescentus NA1000 Δfur CCNA_00280 tRNA pseudouridine synthase A cofit 43 89
o Bosea sp. OAE506 ABIE41_RS00165 tRNA pseudouridine(38-40) synthase TruA strong 42 89
o Sinorhizobium meliloti 1021 SMc01099 tRNA pseudouridine synthase A strong 41 89
o Agrobacterium fabrum C58 Atu0368 tRNA pseudouridine synthase I strong 41 89
o Xanthobacter sp. DMC5 GFF2045 tRNA pseudouridine synthase A insig. 42 89
o Rhizobium sp. OAE497 ABIE40_RS01915 tRNA pseudouridine(38-40) synthase TruA sig. 39 89
o Sphingobium sp. HT1-2 GFF2665 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) cofit 39 89
o Synechocystis sp000284455 PCC 6803 SGL_RS05725 tRNA pseudouridine(38-40) synthase TruA strong 38 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12340 tRNA pseudouridine(38-40) synthase TruA insig. 40 89