Homologs of GFF3572 from Variovorax sp. SCN45

Efflux ABC transporter, permease protein
SEED: ABC-type multidrug transport system, permease component
KEGG: lipooligosaccharide transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3572 Efflux ABC transporter, permease protein insig. 100 100
o Variovorax sp. OAS795 ABID97_RS00920 ABC transporter permease insig. 93 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF360 ABC-type multidrug transport system, permease component insig. 79 99
o Acidovorax sp. GW101-3H11 Ac3H11_4663 ABC-type multidrug transport system, permease component insig. 82 97
o Dechlorosoma suillum PS Dsui_0720 ABC-2 type transporter, NodJ family insig. 53 93
o Ralstonia solanacearum PSI07 RPSI07_RS14770 nodulation protein NodJ sig. 49 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00772 nodulation factor export ABC transporter transmembrane subunit NodJ insig. 49 93
o Burkholderia phytofirmans PsJN BPHYT_RS08760 nodulation protein NodJ insig. 45 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS02545 nodulation protein NodJ insig. 49 95
o Ralstonia solanacearum UW163 UW163_RS11180 nodulation protein NodJ insig. 49 95
o Ralstonia solanacearum GMI1000 RS_RS09925 multidrug ABC transporter permease sig. 48 95
o Paraburkholderia graminis OAS925 ABIE53_001984 lipooligosaccharide transport system permease protein insig. 48 91
o Cupriavidus basilensis FW507-4G11 RR42_RS14300 nodulation protein NodJ insig. 52 85
o Ralstonia sp. UNC404CL21Col ABZR87_RS14460 ABC transporter permease insig. 52 84
o Paraburkholderia sabiae LMG 24235 QEN71_RS22620 ABC transporter permease insig. 46 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS42115 ABC transporter permease insig. 39 92
o Sinorhizobium meliloti 1021 SMa0863 NodJ ABC transporter permease insig. 41 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10850 ABC transporter permease insig. 29 77
  Phaeobacter inhibens DSM 17395 PGA1_c02840 inner membrane transport permease insig. 28 67
o Magnetospirillum magneticum AMB-1 AMB_RS18345 multidrug ABC transporter permease no data 26 84
  Shewanella sp. ANA-3 Shewana3_0795 ABC-2 type transporter (RefSeq) insig. 31 65
  Shewanella oneidensis MR-1 SO3801 ABC transporter, permease protein (NCBI ptt file) sig. 29 69
  Variovorax sp. OAS795 ABID97_RS10415 ABC transporter permease insig. 36 35
  Dinoroseobacter shibae DFL-12 Dshi_0639 ABC-2 type transporter (RefSeq) sig. 26 72
  Sphingobium sp. HT1-2 GFF1567 Efflux ABC transporter, permease protein cofit 24 71
  Castellaniella sp019104865 MT123 ABCV34_RS02915 ABC transporter permease insig. 27 86
  Pseudomonas syringae pv. syringae B728a Psyr_1631 ABC-2 insig. 24 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1631 ABC-2 cofit 24 84
  Shewanella loihica PV-4 Shew_3140 ABC-2 type transporter (RefSeq) insig. 30 65
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2704 ABC-type multidrug transport system, permease component insig. 27 71
  Xanthobacter sp. DMC5 GFF3275 Inner membrane transport permease YadH insig. 26 73
  Marinobacter adhaerens HP15 HP15_1735 ABC transporter, permease protein strong 25 73
  Pseudomonas stutzeri RCH2 Psest_0321 Predicted membrane protein sig. 29 63
  Synechococcus elongatus PCC 7942 Synpcc7942_1307 putative ABC-2 type transport system permease protein insig. 25 67
  Vibrio cholerae E7946 ATCC 55056 CSW01_03125 ABC transporter permease insig. 23 80
  Escherichia fergusonii Becca EFB2_00855 Polysialic acid transport protein KpsM insig. 26 81
  Dinoroseobacter shibae DFL-12 Dshi_2615 ABC-2 type transporter (RefSeq) insig. 25 89
  Rhodopseudomonas palustris CGA009 TX73_018180 ABC transporter permease sig. 27 73
  Escherichia coli Nissle 1917 ECOLIN_RS17035 ABC transporter permease no data 26 81
  Rahnella sp. WP5 EX31_RS18920 ABC transporter permease insig. 27 83
  Escherichia coli BL21 ECD_02828 Polysialic acid transport protein kpsM cofit 26 81
  Escherichia coli ECOR38 HEPCGN_18100 kpsM Polysialic acid transport protein strong 27 58
  Azospirillum brasilense Sp245 AZOBR_RS23890 sugar ABC transporter permease strong 28 73
  Rhodospirillum rubrum S1H Rru_A2499 ABC-2 transporter component (NCBI) no data 25 82
  Methanococcus maripaludis S2 MMP_RS00930 ABC transporter permease insig. 24 76
  Magnetospirillum magneticum AMB-1 AMB_RS01590 multidrug ABC transporter permease insig. 24 82
  Pseudomonas simiae WCS417 PS417_09205 membrane protein strong 25 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2081 ABC-type multidrug transport system, permease component insig. 24 67
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13325 ABC transporter permease cofit 23 84
  Pseudomonas orientalis W4I3 QF045_RS11875 ABC transporter permease insig. 25 60
  Phaeobacter inhibens DSM 17395 PGA1_c24250 inner membrane transport permease sig. 24 72
  Pseudomonas sp. S08-1 OH686_22660 Uncharacterized efflux ABC transporter, permease protein YadH cofit 26 67
  Pseudomonas fluorescens SBW25 PFLU_RS09215 ABC transporter permease insig. 25 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09215 ABC transporter permease insig. 25 60
  Methanococcus maripaludis JJ MMJJ_RS04560 ABC transporter permease insig. 25 76
  Pantoea sp. MT58 IAI47_15675 ABC transporter permease insig. 23 84
  Azospirillum sp. SherDot2 MPMX19_04599 Inner membrane transport permease YadH insig. 27 73
  Shewanella amazonensis SB2B Sama_0773 ABC-type polysaccharide/polyol phosphate export systems permease component (RefSeq) sig. 28 68
  Methylophilus sp. DMC18 GFF1557 Inner membrane transport permease YadH insig. 23 96
  Variovorax sp. OAS795 ABID97_RS10410 ABC transporter permease insig. 27 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS20370 ABC transporter permease insig. 27 71
  Burkholderia phytofirmans PsJN BPHYT_RS29970 sugar ABC transporter permease insig. 26 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02997 ABC-2 type transport system permease protein insig. 26 73
  Pseudomonas putida KT2440 PP_1896 putative ABC transporter - permease subunit insig. 26 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01964 Inner membrane transport permease YadH cofit 24 60
  Pseudomonas segetis P6 ACVTMO_RS18065 ABC transporter permease insig. 28 71
  Paraburkholderia graminis OAS925 ABIE53_005060 ABC-2 type transport system permease protein sig. 26 73
  Sinorhizobium meliloti 1021 SMc04218 transport transmembrane protein insig. 23 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS05685 ABC transporter permease insig. 26 61
  Pseudomonas sp. RS175 PFR28_03033 Inner membrane transport permease YadH insig. 25 60
  Pseudomonas fluorescens FW300-N2E3 AO353_01480 hypothetical protein strong 23 67
  Escherichia coli BL21 ECD_00127 putative ABC transporter permease insig. 23 88
  Escherichia fergusonii Becca EFB2_03917 Inner membrane transport permease YadH insig. 23 88
  Escherichia coli ECOR27 NOLOHH_02775 yadH Inner membrane transport permease YadH insig. 23 88
  Escherichia coli ECRC100 OKFHMN_10430 yadH Inner membrane transport permease YadH cofit 23 88
  Escherichia coli ECRC101 MCAODC_00945 yadH Inner membrane transport permease YadH insig. 23 88
  Escherichia coli ECRC102 NIAGMN_08280 yadH Inner membrane transport permease YadH cofit 23 88
  Escherichia coli ECRC62 BNILDI_08895 yadH Inner membrane transport permease YadH insig. 23 88
  Escherichia coli ECRC98 JDDGAC_14025 yadH Inner membrane transport permease YadH insig. 23 88
  Escherichia coli ECRC99 KEDOAH_17725 yadH Inner membrane transport permease YadH no data 23 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03533 Inner membrane transport permease YadH insig. 23 88
  Escherichia coli Nissle 1917 ECOLIN_RS00710 ABC transporter permease insig. 23 88
  Escherichia coli BW25113 b0128 yadH predicted transporter subunit: membrane component of ABC superfamily (NCBI) sig. 23 88
  Rhodospirillum rubrum S1H Rru_A0640 ABC-2 transporter component (NCBI) insig. 22 75
  Pseudomonas sp. DMC3 GFF4780 Inner membrane transport permease YadH cofit 24 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4637.1 ABC-type multidrug transport system, permease component insig. 24 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11940 ABC transporter permease insig. 27 55
  Serratia liquefaciens MT49 IAI46_21260 ABC transporter permease insig. 25 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15760 ABC transporter permease insig. 27 73
  Bosea sp. OAE506 ABIE41_RS06200 ABC transporter permease insig. 26 73
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12985 ABC transporter permease insig. 26 80
  Pseudomonas sp. SVBP6 COO64_RS05900 ABC transporter permease insig. 24 67
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14185 ABC transporter permease sig. 26 63
  Escherichia coli ECOR38 HEPCGN_08410 Inner membrane transport permease YadH insig. 24 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS01310 ABC transporter permease insig. 26 73
  Ralstonia solanacearum GMI1000 RS_RS00815 ABC transporter permease insig. 27 61
  Burkholderia phytofirmans PsJN BPHYT_RS17730 metal-dependent hydrolase sig. 25 89
  Sinorhizobium meliloti 1021 SM_b20185 hypothetical protein insig. 23 69
  Azospirillum sp. SherDot2 MPMX19_04307 hypothetical protein insig. 21 70
  Pseudomonas putida KT2440 PP_2667 ABC transporter strong 22 71