Homologs of PGA1_c32470 from Phaeobacter inhibens DSM 17395

DNA polymerase IV
SEED: DNA polymerase IV (EC 2.7.7.7)
KEGG: DNA polymerase IV

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c32470 DNA polymerase IV insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_0385 DNA-directed DNA polymerase (RefSeq) insig. 75 100
o Sinorhizobium meliloti 1021 SMc01373 DNA polymerase IV insig. 58 100
o Rhizobium sp. OAE497 ABIE40_RS07310 DNA polymerase IV insig. 55 100
o Agrobacterium fabrum C58 Atu1294 DNA polymerase IV insig. 56 100
o Bosea sp. OAE506 ABIE41_RS18185 DNA polymerase IV insig. 56 100
o Rhodopseudomonas palustris CGA009 TX73_016210 DNA polymerase IV insig. 52 99
o Caulobacter crescentus NA1000 CCNA_02550 DNA polymerase IV-kappa DinB sig. 53 100
o Caulobacter crescentus NA1000 Δfur CCNA_02550 DNA polymerase IV-kappa DinB cofit 53 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08360 DNA polymerase IV insig. 50 100
o Azospirillum brasilense Sp245 AZOBR_RS21200 DNA polymerase IV insig. 51 90
o Magnetospirillum magneticum AMB-1 AMB_RS03210 DNA polymerase IV cofit 52 90
o Azospirillum sp. SherDot2 MPMX19_05504 DNA polymerase IV insig. 47 91
o Rhodospirillum rubrum S1H Rru_A3530 DNA-directed DNA polymerase (NCBI) insig. 48 90
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20685 DNA polymerase IV insig. 41 88
  Desulfovibrio vulgaris Miyazaki F DvMF_2313 DNA-directed DNA polymerase (RefSeq) sig. 42 88
o Desulfovibrio vulgaris Hildenborough JW710 DVU0071 dinP DNA polymerase IV (TIGR) insig. 40 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24610 DNA polymerase IV insig. 40 87
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4535.1 DNA polymerase IV (EC 2.7.7.7) insig. 43 91
o Pseudomonas sp. S08-1 OH686_18925 DNA polymerase IV insig. 40 87
  Sinorhizobium meliloti 1021 SMa2355 DNA polymerase IV insig. 40 92
o Bacteroides thetaiotaomicron VPI-5482 BT4409 DNA damage-inducible protein (NCBI ptt file) strong 37 89
o Bacteroides ovatus ATCC 8483 BACOVA_05231 putative DNA polymerase IV insig. 37 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2974 DNA polymerase IV (EC 2.7.7.7) insig. 39 87
o Pseudomonas sp. RS175 PFR28_00492 DNA polymerase IV insig. 38 87
o Phocaeicola dorei CL03T12C01 ABI39_RS09595 DNA polymerase IV insig. 38 88
  Agrobacterium fabrum C58 Atu5469 DNA polymerase IV insig. 39 90
o Pseudomonas fluorescens FW300-N2E3 AO353_16910 DNA polymerase IV insig. 39 87
  Shewanella sp. ANA-3 Shewana3_0949 DNA polymerase IV (RefSeq) insig. 41 77
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3165 DNA polymerase IV (EC 2.7.7.7) sig. 39 87
o Pseudomonas fluorescens FW300-N2C3 AO356_05570 DNA polymerase IV insig. 38 87
o Bacteroides stercoris CC31F HMPREF1181_RS13945 DNA polymerase IV insig. 38 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13990 DNA polymerase IV insig. 37 88
o Pseudomonas fluorescens SBW25 PFLU_RS24490 DNA polymerase IV insig. 38 87
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24490 DNA polymerase IV insig. 38 87
o Pseudomonas simiae WCS417 PS417_22830 DNA polymerase IV sig. 38 87
o Pseudomonas syringae pv. syringae B728a Psyr_1397 DNA-directed DNA polymerase insig. 39 87
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1397 DNA-directed DNA polymerase insig. 39 87
o Pseudomonas putida KT2440 PP_1203 DNA polymerase IV insig. 38 87
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08955 DNA polymerase IV insig. 38 88
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS15010 DNA polymerase IV insig. 37 88
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12255 DNA polymerase IV insig. 41 92
o Pseudomonas stutzeri RCH2 Psest_1304 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 37 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05230 DNA polymerase IV cofit 39 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS13550 DNA polymerase IV insig. 38 87
o Lysobacter sp. OAE881 ABIE51_RS08465 DNA polymerase IV insig. 39 90
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11335 DNA polymerase IV insig. 38 92
o Rhodanobacter denitrificans MT42 LRK55_RS11065 DNA polymerase IV insig. 38 92
o Rhodanobacter sp. FW510-T8 OKGIIK_12560 dinB DNA polymerase IV insig. 40 91
o Ralstonia solanacearum GMI1000 RS_RS07995 DNA polymerase IV insig. 37 87
  Shewanella oneidensis MR-1 SO1114 dinP DNA-damage-inducible protein P (NCBI ptt file) insig. 40 78
o Ralstonia solanacearum PSI07 RPSI07_RS15755 DNA polymerase IV insig. 37 87
o Klebsiella michiganensis M5al BWI76_RS05530 DNA polymerase IV insig. 38 89
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4104 DNA polymerase IV (EC 2.7.7.7) insig. 38 89
o Acinetobacter radioresistens SK82 MPMX26_00130 DNA polymerase IV insig. 37 87
  Enterobacter sp. TBS_079 MPMX20_00921 DNA polymerase IV insig. 45 65
o Kangiella aquimarina DSM 16071 B158DRAFT_1563 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 36 87
  Alteromonas macleodii MIT1002 MIT1002_03478 DNA polymerase IV insig. 41 70
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01730 DNA polymerase IV insig. 37 87
o Ralstonia solanacearum UW163 UW163_RS15040 DNA polymerase IV insig. 37 87
  Escherichia fergusonii Becca EFB2_03787 DNA polymerase IV insig. 41 70
  Escherichia coli ECRC101 MCAODC_00250 dinB DNA polymerase IV insig. 42 70
  Shewanella loihica PV-4 Shew_2871 DNA polymerase IV (RefSeq) strong 39 77
  Rhizobium sp. OAE497 ABIE40_RS27830 DNA polymerase IV insig. 39 88
  Escherichia coli ECRC102 NIAGMN_07590 dinB DNA polymerase IV insig. 42 70
  Escherichia coli ECRC101 OKFHMN_09730 dinB DNA polymerase IV insig. 42 70
  Escherichia coli ECRC98 JDDGAC_13355 dinB DNA polymerase IV no data 42 70
  Escherichia coli ECRC99 KEDOAH_18425 dinB DNA polymerase IV no data 42 70
  Escherichia coli ECOR38 HEPCGN_07825 dinB DNA polymerase IV cofit 41 70
  Enterobacter asburiae PDN3 EX28DRAFT_2657 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 41 74
  Rahnella sp. WP5 EX31_RS21005 DNA polymerase IV insig. 41 70
  Escherichia coli BL21 ECD_00226 DNA polymerase IV insig. 41 70
  Escherichia coli ECOR27 NOLOHH_02095 dinB DNA polymerase IV cofit 41 70
  Escherichia coli Nissle 1917 ECOLIN_RS01780 DNA polymerase IV insig. 41 70
  Escherichia coli BW25113 b0231 dinB DNA polymerase IV (NCBI) insig. 41 70
  Escherichia coli ECRC62 BNILDI_00290 dinB DNA polymerase IV insig. 41 70
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03407 DNA polymerase IV insig. 41 70
  Pantoea sp. MT58 IAI47_15175 DNA polymerase IV insig. 41 74
o Bifidobacterium breve UCC2003 BBR_RS19045 DNA polymerase IV sig. 35 99
  Pectobacterium carotovorum WPP14 HER17_RS04670 DNA polymerase IV insig. 40 71
  Vibrio cholerae E7946 ATCC 55056 CSW01_11635 DNA polymerase IV insig. 40 69
o Marinobacter adhaerens HP15 HP15_737 DNA polymerase IV cofit 37 89
  Serratia liquefaciens MT49 IAI46_04405 DNA polymerase IV insig. 41 66
  Erwinia tracheiphila SCR3 LU632_RS01150 dinB DNA polymerase IV insig. 40 72
  Shewanella amazonensis SB2B Sama_2527 DNA polymerase IV (RefSeq) sig. 37 77
  Mycobacterium tuberculosis H37Rv Rv1537 Probable DNA polymerase IV DinX (pol IV 1) (DNA nucleotidyltransferase (DNA-directed)) insig. 39 88
  Dickeya dadantii 3937 DDA3937_RS16575 DNA polymerase IV insig. 38 71
o Cupriavidus basilensis FW507-4G11 RR42_RS08990 DNA polymerase insig. 35 88
  Dickeya dianthicola 67-19 HGI48_RS16645 DNA polymerase IV insig. 38 71
  Dickeya dianthicola ME23 DZA65_RS17735 DNA polymerase IV insig. 38 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07745 DNA polymerase IV insig. 30 98
o Variovorax sp. SCN45 GFF5999 DNA polymerase IV (EC 2.7.7.7) insig. 33 93
o Castellaniella sp019104865 MT123 ABCV34_RS12020 DNA polymerase IV insig. 34 89
o Variovorax sp. OAS795 ABID97_RS07995 DNA polymerase IV insig. 33 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF728 DNA polymerase IV (EC 2.7.7.7) insig. 32 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06545 DNA polymerase IV sig. 30 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2408 Nucleotidyltransferase/DNA polymerase involved in DNA repair strong 30 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4648 DNA polymerase IV (EC 2.7.7.7) insig. 37 73
o Paraburkholderia graminis OAS925 ABIE53_005211 DNA polymerase-4 sig. 34 88
o Fusobacterium nucleatum SB010 HUW76_04255 DNA polymerase IV cofit 30 88