| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_15875 | | LuxR family transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS23495 | | response regulator transcription factor | insig. | 80 | 99 |
| o | Pseudomonas sp. DMC3 | GFF1788 | | putative transcriptional regulatory protein NarL | no data | 79 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS05930 | | response regulator transcription factor | insig. | 69 | 98 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS46845 | | response regulator transcription factor | insig. | 69 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_06630 | | DNA-binding response regulator | no data | 69 | 98 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS11045 | | response regulator transcription factor | insig. | 62 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11045 | | response regulator transcription factor | insig. | 62 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_23725 | | LuxR family transcriptional regulator | insig. | 62 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23450 | | LuxR family transcriptional regulator | insig. | 56 | 91 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1601 | | DNA-binding response regulator, LuxR family | insig. | 56 | 89 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02894 | | HTH-type transcriptional regulator MalT | cofit | 60 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1556 | | DNA-binding response regulator, LuxR family | no data | 62 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11030 | | response regulator transcription factor | insig. | 45 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11030 | | response regulator transcription factor | sig. | 45 | 100 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02891 | | Transcriptional regulatory protein LiaR | cofit | 48 | 90 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS18280 | | response regulator transcription factor | insig. | 48 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS59515 | | response regulator transcription factor | insig. | 48 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11645 | | DNA-binding response regulator | no data | 47 | 95 |
| | Bosea sp. OAE506 | ABIE41_RS24085 | | response regulator transcription factor | no data | 39 | 97 |
| | Acinetobacter baumannii LAC-4 | RR41_RS00990 | | response regulator transcription factor | insig. | 34 | 98 |
| | Acinetobacter radioresistens SK82 | MPMX26_02902 | | Transcriptional activator protein ExaE | strong | 35 | 95 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_13640 | | DNA-binding response regulator | insig. | 36 | 95 |
| | Sinorhizobium meliloti 1021 | SMc02248 | | transcriptional regulator | cofit | 35 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_06084 | | Transcriptional regulatory protein LnrK | insig. | 36 | 99 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5158.1 | | Transcriptional regulator, LuxR family | strong | 35 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_05115 | | Transcriptional regulatory protein DegU | insig. | 38 | 96 |
| | Xanthobacter sp. DMC5 | GFF134 | | Transcriptional regulatory protein DegU | no data | 35 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_03317 | | Transcriptional regulatory protein DevR (DosR) | strong | 34 | 93 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_06500 | citB | DNA-binding response regulator | no data | 38 | 95 |
| | Alteromonas macleodii MIT1002 | MIT1002_02224 | | Protease production enhancer protein | cofit | 34 | 96 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS09405 | | response regulator transcription factor | no data | 38 | 96 |
| | Agrobacterium fabrum C58 | Atu0484 | | two component response regulator | strong | 34 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS13915 | | DNA-binding response regulator | cofit | 32 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS02405 | | response regulator transcription factor | insig. | 32 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS12735 | | transcriptional regulator | cofit | 36 | 96 |
| | Pseudomonas sp. RS175 | PFR28_01803 | | Transcriptional regulatory protein DegU | sig. | 35 | 95 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3528 | | Transcriptional regulator, LuxR family | sig. | 35 | 95 |
| | Rhodopseudomonas palustris CGA009 | TX73_004390 | | response regulator transcription factor | strong | 35 | 99 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15195 | | response regulator transcription factor | strong | 34 | 97 |
| | Pseudomonas simiae WCS417 | PS417_17505 | | LuxR family transcriptional regulator | strong | 35 | 95 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS19675 | | DNA-binding response regulator | cofit | 33 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS38395 | agmR;inference=COORDINATES | response regulator AgmR | sig. | 35 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS08520 | | response regulator transcription factor | insig. | 32 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08535 | | response regulator transcription factor | insig. | 35 | 95 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03794 | | Transcriptional regulatory protein DegU | cofit | 34 | 95 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1030.1 | | Transcriptional regulator, LuxR family | no data | 33 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS28910 | agmR;inference=COORDINATES | response regulator AgmR | sig. | 35 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_09660 | | Glycerol metabolism activator | no data | 35 | 95 |
| | Pseudomonas stutzeri RCH2 | Psest_2038 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 34 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28105 | | LuxR family transcriptional regulator | strong | 35 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4489 | | Transcriptional regulator, LuxR family | insig. | 34 | 95 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00075 | | response regulator transcription factor | insig. | 35 | 97 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_15195 | | LuxR family transcriptional regulator | sig. | 35 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1399 | | Transcriptional regulator, LuxR family | strong | 35 | 95 |
| | Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 34 | 95 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1470 | | two component transcriptional regulator, LuxR family | insig. | 33 | 96 |
| | Shewanella sp. ANA-3 | Shewana3_3459 | | two component LuxR family transcriptional regulator (RefSeq) | cofit | 32 | 97 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS16725 | | two-component system response regulator NarL | insig. | 34 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS23840 | | response regulator transcription factor | insig. | 33 | 95 |
| | Pseudomonas stutzeri RCH2 | Psest_2864 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 33 | 96 |
| | Marinobacter adhaerens HP15 | HP15_812 | | two component transcriptional regulator, LuxR family | no data | 31 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A3229 | | Two Component Transcriptional Regulator, LuxR family (NCBI) | insig. | 35 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_05507 | | Transcriptional regulatory protein DegU | insig. | 33 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1384 | | regulatory protein, LuxR:Response regulator receiver | no data | 33 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1384 | | regulatory protein, LuxR:Response regulator receiver | no data | 33 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05910 | | response regulator transcription factor | no data | 32 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05910 | | response regulator transcription factor | sig. | 32 | 97 |
| | Dechlorosoma suillum PS | Dsui_0382 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 30 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22350 | | LuxR family transcriptional regulator | sig. | 33 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS02865 | | response regulator transcription factor | no data | 34 | 95 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_716 | | Transcriptional regulator, LuxR family | no data | 33 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14960 | erdR;inference=COORDINATES | response regulator transcription factor ErdR | strong | 32 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18400 | | DNA-binding response regulator | strong | 32 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42170 | erdR;inference=COORDINATES | response regulator transcription factor ErdR | strong | 32 | 97 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF107 | | Transcriptional regulator, LuxR family | strong | 34 | 95 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17560 | | DNA-binding response regulator | insig. | 32 | 98 |
| | Pectobacterium carotovorum WPP14 | HER17_RS09115 | | nitrate/nitrite response regulator protein NarP | insig. | 36 | 98 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS08190 | | response regulator transcription factor | cofit | 34 | 95 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08425 | | response regulator transcription factor | strong | 34 | 95 |
| | Pseudomonas putida KT2440 | PP_2665 | | Glycerol metabolism activator | strong | 34 | 95 |
| | Pseudomonas sp. S08-1 | OH686_18240 | | Two-component transcriptional response regulator, LuxR family | cofit | 32 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS01665 | | response regulator transcription factor | no data | 34 | 94 |
| | Pseudomonas orientalis W4I3 | QF045_RS08755 | | response regulator transcription factor ErdR | insig. | 32 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS23810 | erdR | response regulator transcription factor ErdR | insig. | 32 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS19960 | erdR | response regulator transcription factor ErdR | insig. | 32 | 97 |
| | Pseudomonas segetis P6 | ACVTMO_RS16470 | erdR | response regulator transcription factor ErdR | insig. | 33 | 95 |
| | Shewanella amazonensis SB2B | Sama_0522 | | response regulator receiver protein (RefSeq) | insig. | 32 | 97 |
| | Shewanella loihica PV-4 | Shew_1545 | | two component LuxR family transcriptional regulator (RefSeq) | no data | 30 | 96 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08575 | | response regulator transcription factor | no data | 35 | 93 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19300 | | response regulator transcription factor | insig. | 35 | 96 |
| | Shewanella oneidensis MR-1 | SO3305 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | insig. | 34 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS20235 | | transcriptional regulator | strong | 32 | 97 |
| | Pseudomonas sp. RS175 | PFR28_00478 | | Transcriptional regulatory protein DegU | strong | 32 | 96 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0465 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 29 | 96 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09460 | | DNA-binding response regulator | cofit | 33 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16835 | | LuxR family transcriptional regulator | sig. | 32 | 95 |
| | Marinobacter adhaerens HP15 | HP15_3183 | | two component transcriptional regulator, LuxR family | strong | 32 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_1732 | | two component LuxR family transcriptional regulator (RefSeq) | strong | 30 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS18195 | | XRE family transcriptional regulator | insig. | 32 | 97 |