Homologs of GFF299 from Variovorax sp. SCN45

Ribosomal silencing factor RsfA
KEGG: ribosome-associated protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF299 Ribosomal silencing factor RsfA cofit 100 100
o Variovorax sp. OAS795 ABID97_RS16720 ribosome silencing factor insig. 86 90
  Acidovorax sp. GW101-3H11 Ac3H11_2419 Iojap protein strong 83 59
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4528 Iojap protein cofit 86 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03560 ribosome silencing factor strong 53 96
  Ralstonia solanacearum UW163 UW163_RS10110 ribosome silencing factor insig. 53 96
  Ralstonia solanacearum PSI07 RPSI07_RS13665 ribosome silencing factor insig. 53 96
  Ralstonia solanacearum GMI1000 RS_RS11010 ribosome silencing factor insig. 72 50
  Cupriavidus basilensis FW507-4G11 RR42_RS04715 ribosome silencing factor RsfS insig. 60 63
  Ralstonia sp. UNC404CL21Col ABZR87_RS15425 ribosome silencing factor sig. 72 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS24415 ribosome silencing factor insig. 69 52
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04518 ribosome-associated protein insig. 67 54
  Paraburkholderia graminis OAS925 ABIE53_001542 ribosome-associated protein sig. 67 54
  Burkholderia phytofirmans PsJN BPHYT_RS06390 ribosome-associated protein IOJAP sig. 66 54
  Herbaspirillum seropedicae SmR1 HSERO_RS17775 hypothetical protein no data 64 51
  Castellaniella sp019104865 MT123 ABCV34_RS02535 ribosome silencing factor insig. 56 52
  Dechlorosoma suillum PS Dsui_0452 iojap-like ribosome-associated protein insig. 57 50
  Methylophilus sp. DMC18 GFF826 Ribosomal silencing factor RsfS cofit 44 47
  Acinetobacter baumannii LAC-4 RR41_RS16120 ribosome silencing factor no data 42 48
  Caulobacter crescentus NA1000 CCNA_03545 iojap protein family no data 43 48
  Caulobacter crescentus NA1000 Δfur CCNA_03545 iojap protein family no data 43 48
  Acinetobacter radioresistens SK82 MPMX26_00531 Ribosomal silencing factor RsfS strong 42 46
  Marinobacter adhaerens HP15 HP15_603 Iojap-related protein sig. 44 46
  Kangiella aquimarina DSM 16071 B158DRAFT_0086 iojap-like ribosome-associated protein strong 41 44
  Pseudomonas sp. RS175 PFR28_03870 Ribosomal silencing factor RsfS no data 41 43
  Pseudomonas aeruginosa MRSN321 DY961_RS12830 rsfS;go_function=ribosome ribosome silencing factor sig. 42 45
  Pseudomonas aeruginosa PA14 IKLFDK_20655 ribosome silencing factor sig. 42 45
  Rhizobium sp. OAE497 ABIE40_RS18960 ribosome silencing factor insig. 41 40
  Pseudomonas sp. BP01 JOY50_RS17690 rsfS ribosome silencing factor insig. 42 44
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09060 ribosome silencing factor no data 39 46
  Rhodanobacter denitrificans MT42 LRK55_RS02455 ribosome silencing factor insig. 38 45
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02700 ribosome silencing factor sig. 38 45
  Pseudomonas aeruginosa PUPa3 DQ20_RS48160 rsfS;go_function=ribosome ribosome silencing factor sig. 41 45
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07245 ribosome silencing factor insig. 38 45
  Rhodanobacter sp. FW510-T8 OKGIIK_09755 rsfS ribosome silencing factor sig. 38 45
  Rhodopseudomonas palustris CGA009 TX73_000865 ribosome silencing factor insig. 34 49
  Pseudomonas putida KT2440 PP_4809 Ribosomal silencing factor RsfS no data 45 40
  Sinorhizobium meliloti 1021 SMc03780 hypothetical protein sig. 35 49
  Bosea sp. OAE506 ABIE41_RS07570 ribosome silencing factor insig. 38 42
  Agrobacterium fabrum C58 Atu2777 hypothetical protein strong 40 40
  Pseudomonas segetis P6 ACVTMO_RS05205 rsfS ribosome silencing factor insig. 39 45
  Pseudomonas sp. SVBP6 COO64_RS15620 rsfS ribosome silencing factor sig. 43 40
  Pseudomonas fluorescens FW300-N2C3 AO356_15300 ribosome silencing factor no data 39 44
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4995 Iojap protein no data 39 44
  Pseudomonas simiae WCS417 PS417_24735 ribosome-associated protein IOJAP no data 39 44
  Pseudomonas fluorescens SBW25 PFLU_RS26665 ribosome silencing factor no data 39 44
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26665 ribosome silencing factor no data 39 44
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05100 Ribosomal silencing factor RsfS no data 39 44
  Pseudomonas orientalis W4I3 QF045_RS27020 ribosome silencing factor cofit 39 44
  Pseudomonas sp. DMC3 GFF3878 Ribosomal silencing factor RsfS no data 40 40
  Dickeya dianthicola ME23 DZA65_RS06570 ribosome silencing factor insig. 37 45
  Pseudomonas syringae pv. syringae B728a Psyr_4367 Iojap-related protein insig. 35 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4367 Iojap-related protein insig. 35 46
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03290 ribosome silencing factor cofit 38 44
  Dickeya dadantii 3937 DDA3937_RS06180 ribosome silencing factor insig. 37 45
  Dickeya dianthicola 67-19 HGI48_RS06225 ribosome silencing factor insig. 37 45
  Shewanella loihica PV-4 Shew_2933 iojap-like protein (RefSeq) no data 34 46
  Pectobacterium carotovorum WPP14 HER17_RS15235 ribosome silencing factor insig. 37 45
  Shewanella oneidensis MR-1 SO1170 iojap domain protein (NCBI ptt file) sig. 34 45
  Pseudomonas fluorescens FW300-N2E3 AO353_06485 ribosome silencing factor no data 38 44
  Shewanella sp. ANA-3 Shewana3_0997 iojap-like protein (RefSeq) no data 34 45
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1358 Iojap protein no data 40 40
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14820 ribosome silencing factor cofit 34 43
  Shewanella amazonensis SB2B Sama_2586 iojap domain-containing protein (RefSeq) sig. 33 45
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2690 Iojap protein no data 37 44
  Pantoea sp. MT58 IAI47_14015 ribosome silencing factor sig. 37 43
  Escherichia coli BL21 ECD_00606 ribosomal silencing factor cofit 37 43
  Escherichia fergusonii Becca EFB2_03455 Ribosomal silencing factor RsfS insig. 37 43
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03069 Ribosomal silencing factor RsfS insig. 37 43
  Escherichia coli Nissle 1917 ECOLIN_RS03470 ribosome silencing factor no data 37 43
  Escherichia coli BW25113 b0637 ybeB orf, hypothetical protein (VIMSS) no data 37 43
  Escherichia coli ECOR27 NOLOHH_23730 rsfS ribosome silencing factor strong 37 43
  Escherichia coli ECOR38 HEPCGN_00920 rsfS ribosome silencing factor sig. 37 43
  Escherichia coli ECRC100 OKFHMN_07355 rsfS ribosome silencing factor cofit 37 43
  Escherichia coli ECRC101 MCAODC_26570 rsfS ribosome silencing factor sig. 37 43
  Escherichia coli ECRC102 NIAGMN_05410 rsfS ribosome silencing factor insig. 37 43
  Escherichia coli ECRC62 BNILDI_21740 rsfS ribosome silencing factor cofit 37 43
  Escherichia coli ECRC98 JDDGAC_11000 rsfS ribosome silencing factor insig. 37 43
  Escherichia coli ECRC99 KEDOAH_20615 rsfS ribosome silencing factor no data 37 43
  Pseudomonas sp. S08-1 OH686_09330 ribosome silencing factor insig. 37 45
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4550 Iojap protein insig. 37 43
  Enterobacter asburiae PDN3 EX28DRAFT_2326 ribosome silencing factor RsfS/YbeB/iojap insig. 37 44
  Alteromonas macleodii MIT1002 MIT1002_01853 Ribosomal silencing factor RsfS insig. 33 45
  Pseudomonas stutzeri RCH2 Psest_0510 iojap-like ribosome-associated protein sig. 38 45
  Serratia liquefaciens MT49 IAI46_05940 ribosome silencing factor no data 36 43
  Enterobacter sp. TBS_079 MPMX20_01296 Ribosomal silencing factor RsfS insig. 37 44
  Rahnella sp. WP5 EX31_RS23130 ribosome silencing factor insig. 33 44
  Cellulophaga baltica 18 M666_RS08955 ribosome silencing factor insig. 34 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_04870 ribosome silencing factor insig. 35 44
  Klebsiella pneumoniae MKP103 KDGMDA_16405 ribosome silencing factor strong 37 43
  Klebsiella pneumoniae MRSN742743 KFA93_RS02220 rsfS;go_function=ribosome ribosome silencing factor sig. 37 43
  Erwinia amylovora T8 OLJFJH_17215 ribosome silencing factor insig. 35 44
  Magnetospirillum magneticum AMB-1 AMB_RS23800 ribosome silencing factor insig. 37 40
  Klebsiella michiganensis M5al BWI76_RS08045 ribosome silencing factor RsfS no data 36 43
  Azospirillum brasilense Sp245 AZOBR_RS04065 ribosome-associated protein IOJAP insig. 33 40
  Xanthobacter sp. DMC5 GFF3948 Ribosomal silencing factor RsfS insig. 32 42
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2428 iojap-like ribosome-associated protein sig. 36 45
  Phaeobacter inhibens DSM 17395 PGA1_c29760 iojap-like ribosome-associated protein sig. 28 42
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2504 ribosome silencing factor RsfS/YbeB/iojap strong 31 47
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_02455 rsfS ribosome silencing factor cofit 34 44