Homologs of EX31_RS20735 from Rahnella sp. WP5

exodeoxyribonuclease V subunit beta
SEED: Exodeoxyribonuclease V beta chain (EC 3.1.11.5)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rahnella sp. WP5 EX31_RS20735 exodeoxyribonuclease V subunit beta strong 100 100
o Dickeya dadantii 3937 DDA3937_RS11080 exodeoxyribonuclease V subunit beta insig. 66 100
o Dickeya dianthicola 67-19 HGI48_RS11100 exodeoxyribonuclease V subunit beta no data 66 100
o Dickeya dianthicola ME23 DZA65_RS11480 exodeoxyribonuclease V subunit beta no data 66 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 53 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5151 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 52 99
o Pseudomonas fluorescens FW300-N2E3 AO353_06045 exodeoxyribonuclease V subunit beta strong 52 99
o Pseudomonas fluorescens SBW25 PFLU_RS25590 exodeoxyribonuclease V subunit beta strong 53 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25590 exodeoxyribonuclease V subunit beta no data 53 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3460 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) insig. 52 99
o Pseudomonas fluorescens FW300-N2C3 AO356_07915 exodeoxyribonuclease V subunit beta sig. 51 99
o Pseudomonas simiae WCS417 PS417_23775 exodeoxyribonuclease V subunit beta strong 52 99
o Pseudomonas putida KT2440 PP_4673 Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease no data 52 99
o Pseudomonas sp. RS175 PFR28_00007 RecBCD enzyme subunit RecB insig. 52 99
o Paraburkholderia graminis OAS925 ABIE53_000495 exodeoxyribonuclease V beta subunit insig. 52 99
o Pseudomonas syringae pv. syringae B728a Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 52 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 52 100
o Marinobacter adhaerens HP15 HP15_3713 exodeoxyribonuclease V, beta subunit no data 48 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07665 exodeoxyribonuclease V subunit beta strong 47 99
o Castellaniella sp019104865 MT123 ABCV34_RS02965 exodeoxyribonuclease V subunit beta sig. 45 99
o Pantoea sp. MT58 IAI47_03965 exodeoxyribonuclease V subunit beta no data 40 99
o Klebsiella michiganensis M5al BWI76_RS23230 exodeoxyribonuclease V subunit beta strong 41 99
o Escherichia coli ECOR27 NOLOHH_11935 recB exodeoxyribonuclease V subunit beta no data 41 99
o Escherichia fergusonii Becca EFB2_01064 RecBCD enzyme subunit RecB strong 40 99
o Escherichia coli BL21 ECD_02668 exonuclease V (RecBCD complex), beta subunit no data 40 99
o Escherichia coli ECOR38 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta cofit 41 99
o Escherichia coli Nissle 1917 ECOLIN_RS15830 exodeoxyribonuclease V subunit beta no data 41 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00910 RecBCD enzyme subunit RecB no data 40 99
o Escherichia coli BW25113 b2820 recB exonuclease V (RecBCD complex), beta subunit (NCBI) strong 40 99
o Serratia liquefaciens MT49 IAI46_20405 exodeoxyribonuclease V subunit beta no data 41 100
o Escherichia coli ECRC62 BNILDI_10415 recB exodeoxyribonuclease V subunit beta no data 40 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_11780 exodeoxyribonuclease V subunit beta strong 40 99
o Escherichia coli ECRC101 OKFHMN_20050 recB exodeoxyribonuclease V subunit beta no data 40 99
o Escherichia coli ECRC101 MCAODC_10575 recB exodeoxyribonuclease V subunit beta no data 40 99
o Escherichia coli ECRC102 NIAGMN_17820 recB exodeoxyribonuclease V subunit beta no data 40 99
o Escherichia coli ECRC98 JDDGAC_23715 recB exodeoxyribonuclease V subunit beta no data 40 99
o Escherichia coli ECRC99 KEDOAH_08080 recB exodeoxyribonuclease V subunit beta no data 40 99
o Enterobacter sp. TBS_079 MPMX20_03683 RecBCD enzyme subunit RecB strong 39 99
o Pectobacterium carotovorum WPP14 HER17_RS16525 exodeoxyribonuclease V subunit beta strong 40 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1301 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 40 99
o Erwinia tracheiphila SCR3 LU632_RS06190 recB exodeoxyribonuclease V subunit beta no data 39 99
o Enterobacter asburiae PDN3 EX28DRAFT_2895 DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) no data 39 99
o Shewanella oneidensis MR-1 SO2148 recB exodeoxyribonuclease V, beta subunit (NCBI ptt file) no data 36 100
o Shewanella sp. ANA-3 Shewana3_2246 exodeoxyribonuclease V, beta subunit (RefSeq) no data 36 99
o Shewanella loihica PV-4 Shew_2130 exodeoxyribonuclease V, beta subunit (RefSeq) no data 36 99
o Shewanella amazonensis SB2B Sama_1901 exodeoxyribonuclease V, beta subunit (RefSeq) no data 37 99
o Pseudomonas stutzeri RCH2 Psest_0213 exodeoxyribonuclease V, beta subunit no data 35 99
o Pseudomonas sp. S08-1 OH686_12075 Exodeoxyribonuclease V beta chain cofit 34 99
o Alteromonas macleodii MIT1002 MIT1002_02360 Exodeoxyribonuclease V beta chain no data 31 99
o Lysobacter sp. OAE881 ABIE51_RS01025 exodeoxyribonuclease V subunit beta strong 33 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS23190 exodeoxyribonuclease V subunit beta insig. 35 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05086 DNA helicase/exodeoxyribonuclease V, beta subunit insig. 35 71
o Burkholderia phytofirmans PsJN BPHYT_RS07975 exodeoxyribonuclease V subunit beta no data 34 71
o Rhodanobacter sp. FW510-T8 OKGIIK_09230 RecBCD enzyme subunit RecB insig. 32 99
  Paraburkholderia graminis OAS925 ABIE53_001811 exodeoxyribonuclease V beta subunit strong 34 71
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02180 UvrD-helicase domain-containing protein strong 31 99
o Rhodanobacter denitrificans MT42 LRK55_RS01930 UvrD-helicase domain-containing protein insig. 31 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5353.1 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 30 88
o Acinetobacter radioresistens SK82 MPMX26_00272 RecBCD enzyme subunit RecB strong 27 99
  Mycobacterium tuberculosis H37Rv Rv0630c Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease) insig. 32 40
  Dinoroseobacter shibae DFL-12 Dshi_3438 Double-strand break repair helicase AddA (RefSeq) no data 24 68
  Rhodopseudomonas palustris CGA009 TX73_011430 UvrD-helicase domain-containing protein cofit 27 40
  Synechococcus elongatus PCC 7942 Synpcc7942_1157 hypothetical protein insig. 25 67
  Bacteroides ovatus ATCC 8483 BACOVA_04090 UvrD/REP helicase no data 24 63
o Burkholderia phytofirmans PsJN BPHYT_RS07975 exodeoxyribonuclease V subunit beta no data 37 14
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05920 hypothetical protein no data 22 67
o Paraburkholderia sabiae LMG 24235 QEN71_RS23190 exodeoxyribonuclease V subunit beta insig. 37 14
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05086 DNA helicase/exodeoxyribonuclease V, beta subunit insig. 37 14
  Paraburkholderia graminis OAS925 ABIE53_001811 exodeoxyribonuclease V beta subunit strong 37 14
  Sinorhizobium meliloti 1021 SMc02760 ATP-dependent nuclease/helicase no data 28 40
  Mycobacterium tuberculosis H37Rv Rv0630c Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease) insig. 45 8
  Agrobacterium fabrum C58 Atu0023 ATP-dependant DNA helicase no data 27 42
  Variovorax sp. OAS795 ABID97_RS18290 UvrD-helicase domain-containing protein insig. 24 67
  Rhodospirillum rubrum S1H Rru_A3434 UvrD/REP helicase (NCBI) no data 27 47
  Caulobacter crescentus NA1000 CCNA_03652 ATP-dependent nuclease subunit A strong 26 40
  Caulobacter crescentus NA1000 Δfur CCNA_03652 ATP-dependent nuclease subunit A cofit 26 40
  Phaeobacter inhibens DSM 17395 PGA1_c35310 double strand break repair helicase AddA no data 23 42
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 24 40
  Bacteroides thetaiotaomicron VPI-5482 BT1054 ATP-dependent helicase (NCBI ptt file) no data 26 37
  Rhizobium sp. OAE497 ABIE40_RS19360 double-strand break repair helicase AddA strong 26 41
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4027 DNA helicase/exodeoxyribonuclease V, subunit A (EC 3.1.11.5) no data 24 69
  Fusobacterium nucleatum SB010 HUW76_07175 UvrD-helicase domain-containing protein strong 26 13
  Phocaeicola dorei CL03T12C01 ABI39_RS17615 UvrD-helicase domain-containing protein no data 24 37
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03535 UvrD-helicase domain-containing protein cofit 25 37
  Ralstonia solanacearum GMI1000 RS_RS05965 ATP-dependent exonuclease no data 26 42
  Mycobacterium tuberculosis H37Rv Rv0630c Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease) insig. 29 14
  Azospirillum sp. SherDot2 MPMX19_02722 ATP-dependent helicase/nuclease subunit A no data 27 35
  Paraburkholderia graminis OAS925 ABIE53_003077 DNA helicase-2/ATP-dependent DNA helicase PcrA insig. 34 11
  Phaeobacter inhibens DSM 17395 PGA1_c31050 putative UvrD/REP helicase insig. 27 18
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04321 DNA helicase-2 / ATP-dependent DNA helicase PcrA insig. 33 11
  Rhodopseudomonas palustris CGA009 TX73_014510 ATP-dependent helicase insig. 38 8
  Burkholderia phytofirmans PsJN BPHYT_RS14580 ATP-dependent DNA helicase insig. 33 11
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 33 10
  Ralstonia solanacearum PSI07 RPSI07_RS18225 ATP-dependent exonuclease no data 26 42
  Ralstonia sp. UNC404CL21Col ABZR87_RS10785 exodeoxyribonuclease V subunit beta strong 25 45
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 37 10
  Bosea sp. OAE506 ABIE41_RS01165 ATP-dependent helicase insig. 35 11
  Herbaspirillum seropedicae SmR1 HSERO_RS04330 ATP-dependent exonuclease strong 25 37
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5353.1 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 57 5
  Rhizobium sp. OAE497 ABIE40_RS02665 ATP-dependent helicase insig. 37 8