Homologs of EX28DRAFT_1745 from Enterobacter asburiae PDN3

GIY-YIG catalytic domain
SEED: Excinuclease cho (excinuclease ABC alternative C subunit)
KEGG: excinuclease Cho

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Enterobacter asburiae PDN3 EX28DRAFT_1745 GIY-YIG catalytic domain insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_01873 Excinuclease cho insig. 92 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3498 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 74 98
o Escherichia coli ECRC62 BNILDI_16240 cho excinuclease Cho insig. 76 96
o Escherichia coli BL21 ECD_01710 endonuclease of nucleotide excision repair no data 76 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01991 Excinuclease cho insig. 76 96
o Escherichia coli BW25113 b1741 ydjQ endonuclease of nucleotide excision repair (NCBI) sig. 76 96
o Escherichia coli ECRC101 OKFHMN_26940 cho excinuclease Cho no data 76 96
o Escherichia coli ECRC102 NIAGMN_01125 cho excinuclease Cho no data 76 96
o Escherichia coli ECRC98 JDDGAC_01515 cho excinuclease Cho no data 76 96
o Escherichia coli ECOR27 NOLOHH_17455 cho excinuclease Cho no data 75 96
o Escherichia coli ECRC101 MCAODC_18470 cho excinuclease Cho insig. 76 96
o Escherichia coli ECRC99 KEDOAH_01170 cho excinuclease Cho no data 75 96
o Escherichia coli ECOR38 HEPCGN_05305 cho excinuclease Cho cofit 75 96
o Escherichia coli Nissle 1917 ECOLIN_RS09710 excinuclease Cho cofit 75 95
o Klebsiella michiganensis M5al BWI76_RS11710 nucleotide excision repair endonuclease insig. 74 94
o Escherichia fergusonii Becca EFB2_02252 Excinuclease cho insig. 74 95
o Pantoea sp. MT58 IAI47_11065 excinuclease Cho insig. 64 94
o Rahnella sp. WP5 EX31_RS05180 excinuclease Cho insig. 48 93
o Serratia liquefaciens MT49 IAI46_09070 endonuclease insig. 48 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2112.1 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 48 87
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 38 89
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 44 82
  Herbaspirillum seropedicae SmR1 HSERO_RS11365 nuclease insig. 39 92
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 38 86
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3320 GIY-YIG catalytic domain. insig. 31 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 29 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06310 excinuclease ABC subunit UvrC insig. 27 73
  Desulfovibrio vulgaris Hildenborough JW710 DVU0801 uvrC excinuclease ABC, C subunit (TIGR) insig. 34 60
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01670 excinuclease ABC subunit UvrC insig. 33 57
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07560 DNA polymerase III subunit epsilon insig. 32 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 45 29
  Desulfovibrio vulgaris Miyazaki F DvMF_2845 excinuclease ABC, C subunit (RefSeq) strong 33 56
  Azospirillum brasilense Sp245 AZOBR_RS18630 excinuclease ABC subunit C insig. 32 63
  Synechococcus elongatus PCC 7942 Synpcc7942_1945 uvrC excinuclease ABC subunit C strong 33 57
  Caulobacter crescentus NA1000 CCNA_02975 excinuclease ABC subunit C strong 33 55
  Caulobacter crescentus NA1000 Δfur CCNA_02975 excinuclease ABC subunit C cofit 33 55
  Phaeobacter inhibens DSM 17395 PGA1_c02880 uvrABC system protein C strong 27 70
  Bacteroides thetaiotaomicron VPI-5482 BT3266 excinuclease ABC subunit C (NCBI ptt file) strong 29 60
  Dinoroseobacter shibae DFL-12 Dshi_0644 excinuclease ABC, C subunit (RefSeq) strong 27 75
  Rhodopseudomonas palustris CGA009 TX73_006010 excinuclease ABC subunit UvrC strong 31 55
  Methanococcus maripaludis JJ MMJJ_RS01240 excinuclease ABC subunit UvrC insig. 26 56
  Castellaniella sp019104865 MT123 ABCV34_RS06980 excinuclease ABC subunit UvrC insig. 31 60
  Methanococcus maripaludis S2 MMP_RS03810 excinuclease ABC subunit UvrC insig. 26 56
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 44 27
  Bacteroides ovatus ATCC 8483 BACOVA_01365 excinuclease ABC, C subunit insig. 28 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 42 27
  Acidovorax sp. GW101-3H11 Ac3H11_373 Excinuclease ABC subunit C strong 27 78
  Sinorhizobium meliloti 1021 SMc00602 excinuclease ABC subunit C strong 29 62
  Paraburkholderia graminis OAS925 ABIE53_003223 DNA polymerase-3 subunit epsilon insig. 41 27
  Bacteroides stercoris CC31F HMPREF1181_RS02095 excinuclease ABC subunit UvrC insig. 28 60
  Herbaspirillum seropedicae SmR1 HSERO_RS09690 excinuclease ABC subunit C strong 32 56
  Azospirillum sp. SherDot2 MPMX19_01070 UvrABC system protein C insig. 28 64
  Rhodanobacter sp. FW510-T8 OKGIIK_06930 uvrC excinuclease ABC subunit UvrC insig. 28 70
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13890 exonuclease domain-containing protein insig. 25 77
  Agrobacterium fabrum C58 Atu1129 excinuclease ABC chain C strong 29 58
  Variovorax sp. OAS795 ABID97_RS10635 excinuclease ABC subunit UvrC strong 29 61
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00380 excinuclease ABC subunit UvrC insig. 28 77
  Rhodanobacter denitrificans MT42 LRK55_RS00120 excinuclease ABC subunit UvrC strong 28 77
  Rhodospirillum rubrum S1H Rru_A2220 Excinuclease ABC, C subunit (NCBI) insig. 30 58
  Variovorax sp. SCN45 GFF2859 Excinuclease ABC subunit C insig. 29 61
  Azospirillum brasilense Sp245 AZOBR_RS08965 excinuclease ABC subunit C insig. 29 64
  Rhizobium sp. OAE497 ABIE40_RS06500 excinuclease ABC subunit UvrC no data 28 60
  Pseudomonas fluorescens FW300-N2E3 AO353_21835 excinuclease ABC subunit C strong 30 56
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 28 62
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3186 Excinuclease ABC subunit C strong 31 65
  Kangiella aquimarina DSM 16071 B158DRAFT_1273 Excinuclease ABC subunit C strong 29 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5618 Excinuclease ABC subunit C insig. 29 56
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11525 excinuclease ABC subunit UvrC strong 26 60
  Cupriavidus basilensis FW507-4G11 RR42_RS14000 excinuclease ABC subunit C strong 29 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0619 excinuclease ABC, C subunit strong 29 55
  Phocaeicola dorei CL03T12C01 ABI39_RS05415 excinuclease ABC subunit UvrC insig. 26 60
  Pseudomonas putida KT2440 PP_4098 UvrABC system protein C strong 30 56
  Acinetobacter radioresistens SK82 MPMX26_00228 UvrABC system protein C sig. 28 60
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16350 excinuclease ABC subunit C strong 26 73
  Azospirillum sp. SherDot2 MPMX19_05963 UvrABC system protein C insig. 28 61
  Dickeya dianthicola 67-19 HGI48_RS13795 excinuclease ABC subunit UvrC insig. 29 56
  Bifidobacterium breve UCC2003 BBR_RS15515 excinuclease ABC subunit UvrC strong 25 63
  Dickeya dianthicola ME23 DZA65_RS14285 excinuclease ABC subunit UvrC insig. 29 56
  Paraburkholderia graminis OAS925 ABIE53_003025 excinuclease ABC subunit C strong 31 60
  Ralstonia sp. UNC404CL21Col ABZR87_RS10245 excinuclease ABC subunit UvrC cofit 31 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2886 Excinuclease ABC subunit C sig. 28 56
  Pseudomonas syringae pv. syringae B728a Psyr_2896 Excinuclease ABC subunit C strong 29 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2896 Excinuclease ABC subunit C strong 29 56
  Marinobacter adhaerens HP15 HP15_1568 excinuclease ABC subunit C strong 27 62
  Dickeya dadantii 3937 DDA3937_RS13700 excinuclease ABC subunit UvrC insig. 28 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04376 Excinuclease ABC subunit C sig. 31 56
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3847 Excinuclease ABC subunit C no data 30 58
  Pseudomonas fluorescens SBW25 PFLU_RS10770 excinuclease ABC subunit UvrC insig. 28 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10770 excinuclease ABC subunit UvrC insig. 28 56
  Pseudomonas simiae WCS417 PS417_10725 excinuclease ABC subunit C strong 28 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS04665 excinuclease ABC subunit UvrC insig. 29 57
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18110 excinuclease ABC subunit C strong 27 56
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14525 excinuclease ABC subunit UvrC cofit 30 54
  Ralstonia solanacearum UW163 UW163_RS11990 excinuclease ABC subunit UvrC insig. 30 54
  Burkholderia phytofirmans PsJN BPHYT_RS14320 UvrABC system protein C strong 29 56
  Pseudomonas fluorescens FW300-N2C3 AO356_00350 excinuclease ABC subunit C strong 28 56
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04150 excinuclease ABC subunit UvrC insig. 26 60
  Magnetospirillum magneticum AMB-1 AMB_RS19240 UvrABC system protein C cofit 30 54
  Dechlorosoma suillum PS Dsui_2470 excinuclease ABC, C subunit strong 29 58