Homologs of Dsui_0812 from Dechlorosoma suillum PS

ribosomal RNA small subunit methyltransferase RsmB
SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dechlorosoma suillum PS Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB strong 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase insig. 45 95
o Castellaniella sp019104865 MT123 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 49 93
o Burkholderia phytofirmans PsJN BPHYT_RS01475 16S rRNA methyltransferase insig. 45 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 46 95
o Herbaspirillum seropedicae SmR1 HSERO_RS00355 methyltransferase insig. 50 90
o Paraburkholderia graminis OAS925 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase insig. 45 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 47 92
o Ralstonia solanacearum PSI07 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 48 94
o Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 45 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 47 94
o Pectobacterium carotovorum WPP14 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 45 90
o Rahnella sp. WP5 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 46 92
o Serratia liquefaciens MT49 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 45 92
o Enterobacter asburiae PDN3 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 44 93
o Dickeya dianthicola ME23 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 45 92
o Dickeya dianthicola 67-19 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 44 92
o Klebsiella michiganensis M5al BWI76_RS25680 16S rRNA m5C967 methyltransferase strong 44 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 48 94
o Ralstonia solanacearum UW163 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 48 94
o Escherichia coli BL21 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent cofit 43 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B strong 43 93
o Escherichia coli BW25113 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) strong 43 93
o Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 45 92
o Escherichia coli ECOR27 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 43 93
o Escherichia coli ECRC62 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 43 93
o Escherichia coli ECOR38 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 43 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) insig. 48 92
o Escherichia fergusonii Becca EFB2_00535 Ribosomal RNA small subunit methyltransferase B insig. 43 93
o Escherichia coli Nissle 1917 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 43 93
o Escherichia coli ECRC101 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 43 93
o Escherichia coli ECRC101 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 43 93
o Escherichia coli ECRC102 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 43 93
o Escherichia coli ECRC98 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no data 43 93
o Escherichia coli ECRC99 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no data 43 93
o Ralstonia solanacearum GMI1000 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 48 94
o Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 43 93
o Cupriavidus basilensis FW507-4G11 RR42_RS20450 16S rRNA methyltransferase strong 47 94
o Marinobacter adhaerens HP15 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase strong 44 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 cofit 43 93
o Variovorax sp. OAS795 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 47 94
o Pseudomonas sp. S08-1 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 48 86
o Variovorax sp. SCN45 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) insig. 46 92
o Erwinia tracheiphila SCR3 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 43 93
o Pseudomonas stutzeri RCH2 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB sig. 46 94
o Kangiella aquimarina DSM 16071 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB insig. 43 90
o Shewanella loihica PV-4 Shew_3738 sun protein (RefSeq) strong 42 93
o Pseudomonas syringae pv. syringae B728a Psyr_0017 16S rRNA m(5)C-967 methyltransferase insig. 46 86
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0017 16S rRNA m(5)C-967 methyltransferase insig. 46 86
o Acidovorax sp. GW101-3H11 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 44 92
o Pseudomonas fluorescens FW300-N2E3 AO353_10630 16S rRNA methyltransferase sig. 46 90
o Pseudomonas simiae WCS417 PS417_00085 16S rRNA methyltransferase insig. 46 86
o Pseudomonas fluorescens SBW25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 46 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 46 90
o Pseudomonas putida KT2440 PP_0066 Ribosomal RNA small subunit methyltransferase B strong 45 86
o Shewanella oneidensis MR-1 SO0030 sun sun protein (NCBI ptt file) sig. 43 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 46 86
o Pseudomonas fluorescens FW300-N2C3 AO356_11275 16S rRNA methyltransferase strong 46 86
o Alteromonas macleodii MIT1002 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B cofit 41 91
o Shewanella sp. ANA-3 Shewana3_0033 sun protein (RefSeq) strong 42 93
o Rhodanobacter sp. FW510-T8 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 47 80
o Pseudomonas sp. RS175 PFR28_04663 Ribosomal RNA small subunit methyltransferase B sig. 46 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 45 90
o Shewanella amazonensis SB2B Sama_0041 sun protein (RefSeq) strong 42 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 44 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 45 82
o Acinetobacter radioresistens SK82 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B insig. 38 96
o Lysobacter sp. OAE881 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 43 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 46 80
o Rhodanobacter denitrificans MT42 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 45 80
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4741.1 hypothetical protein insig. 40 90
  Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 34 88
o Caulobacter crescentus NA1000 CCNA_00101 16S rRNA m5C methyltransferase RsmB sig. 37 86
o Caulobacter crescentus NA1000 Δfur CCNA_00101 16S rRNA m5C methyltransferase RsmB cofit 37 86
o Azospirillum sp. SherDot2 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B insig. 36 84
o Rhodopseudomonas palustris CGA009 TX73_000155 transcription antitermination factor NusB insig. 36 86
o Azospirillum brasilense Sp245 AZOBR_RS00235 MFS transporter sig. 35 84
  Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 32 81
  Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 37 78
  Magnetospirillum magneticum AMB-1 AMB_RS19160 methyltransferase domain-containing protein cofit 35 62
o Agrobacterium fabrum C58 Atu2825 Sun protein sig. 32 86
  Fusobacterium nucleatum SB010 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 28 78
  Sinorhizobium meliloti 1021 SMc04090 sun protein insig. 33 81
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 32 100
o Rhizobium sp. OAE497 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1161 tRNA and rRNA cytosine-C5-methylases insig. 33 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF769 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 38 57
  Shewanella amazonensis SB2B Sama_1664 tRNA and rRNA cytosine-C5-methylase (RefSeq) insig. 37 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04755 SAM-dependent methyltransferase strong 36 63
  Ralstonia solanacearum UW163 UW163_RS08915 SAM-dependent methyltransferase insig. 36 63
  Ralstonia solanacearum PSI07 RPSI07_RS12630 SAM-dependent methyltransferase insig. 36 63
  Magnetospirillum magneticum AMB-1 AMB_RS00745 MFS transporter insig. 36 78
  Shewanella oneidensis MR-1 SO2215 sun protein, putative (NCBI ptt file) sig. 35 62
  Herbaspirillum seropedicae SmR1 HSERO_RS05915 SAM-dependent methyltransferase sig. 35 59
o Phaeobacter inhibens DSM 17395 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B sig. 31 90
  Dechlorosoma suillum PS Dsui_1543 tRNA/rRNA cytosine-C5-methylase sig. 37 64
  Ralstonia solanacearum GMI1000 RS_RS12315 SAM-dependent methyltransferase sig. 35 63
  Shewanella sp. ANA-3 Shewana3_2309 Fmu (Sun) domain-containing protein (RefSeq) insig. 34 62
  Caulobacter crescentus NA1000 CCNA_01691 tRNA/rRNA methyltransferase strong 34 63
  Caulobacter crescentus NA1000 Δfur CCNA_01691 tRNA/rRNA methyltransferase cofit 34 63