| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Agrobacterium fabrum C58 | Atu4773 | | two component response regulator | strong | 100 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_03582 | | Response regulator protein TmoT | insig. | 56 | 97 |
| o | Xanthobacter sp. DMC5 | GFF4036 | | Response regulator protein TodT | no data | 41 | 97 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001503 | | FixJ family two-component response regulator | strong | 41 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS35880 | | response regulator receiver protein | insig. | 40 | 98 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_25420 | | chemotaxis protein CheY | insig. | 39 | 98 |
| o | Rhodopseudomonas palustris CGA009 | TX73_010865 | | response regulator | insig. | 40 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11905 | | response regulator receiver | no data | 40 | 95 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS37555 | | response regulator | strong | 39 | 93 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS25955 | | transcriptional regulator | no data | 41 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS07235 | | response regulator transcription factor | insig. | 36 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS34725 | | transcriptional regulator | insig. | 41 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17625 | | Nodulation protein W | no data | 39 | 93 |
| | Pseudomonas simiae WCS417 | PS417_10325 | | chemotaxis protein CheY | no data | 39 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39345 | | response regulator | insig. | 44 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_001061 | | FixJ family two-component response regulator | sig. | 34 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21040 | | response regulator | cofit | 36 | 95 |
| o | Lysobacter sp. OAE881 | ABIE51_RS11975 | | response regulator | insig. | 35 | 98 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | strong | 35 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | insig. | 35 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33050 | | LuxR family transcriptional regulator | insig. | 38 | 94 |
| | Sinorhizobium meliloti 1021 | SMa1688 | | Two-component response regulator | insig. | 38 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_02868 | | Response regulator protein TmoT | insig. | 35 | 91 |
| | Agrobacterium fabrum C58 | Atu4774 | | two component response regulator | insig. | 35 | 96 |
| | Dechlorosoma suillum PS | Dsui_1581 | | response regulator | strong | 44 | 86 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4095 | | Nitrogen regulation protein NR(I) | strong | 36 | 97 |
| | Rhodopseudomonas palustris CGA009 | TX73_010870 | | response regulator | insig. | 41 | 84 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | insig. | 38 | 94 |
| | Pseudomonas putida KT2440 | PP_5240 | | Response regulator | sig. | 37 | 92 |
| | Pseudomonas sp. RS175 | PFR28_02132 | | Response regulator protein TmoT | insig. | 39 | 93 |
| | Pseudomonas sp. RS175 | PFR28_02521 | | Response regulator protein TmoT | no data | 36 | 93 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22615 | | nodulation protein NolW | no data | 35 | 89 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22535 | | LuxR family transcriptional regulator | insig. | 40 | 93 |
| | Dechlorosoma suillum PS | Dsui_3386 | | response regulator | no data | 33 | 97 |
| | Lysobacter sp. OAE881 | ABIE51_RS11970 | | response regulator transcription factor | insig. | 39 | 85 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS04170 | | response regulator transcription factor | no data | 38 | 86 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS13795 | | response regulator | insig. | 36 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4408 | | two-component response regulator | insig. | 34 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS15185 | | response regulator | insig. | 34 | 98 |
| | Shewanella loihica PV-4 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 38 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10740 | | LuxR family transcriptional regulator | insig. | 37 | 96 |
| | Pseudomonas sp. DMC3 | GFF1098 | | Response regulator protein TodT | no data | 35 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS07490 | | response regulator | no data | 41 | 85 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35945 | | response regulator receiver | insig. | 41 | 82 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS07355 | | LuxR family transcriptional regulator | no data | 33 | 94 |
| | Marinobacter adhaerens HP15 | HP15_1053 | | two component transcriptional regulator, LuxR family | sig. | 37 | 94 |
| | Dechlorosoma suillum PS | Dsui_2511 | | response regulator | insig. | 36 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_03583 | | Response regulator protein TodT | no data | 33 | 95 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_3505 | | Response regulator receiver domain | insig. | 38 | 94 |
| o | Pseudomonas segetis P6 | ACVTMO_RS02200 | | response regulator transcription factor | no data | 36 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01879 | | Response regulator | no data | 35 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS14090 | | response regulator transcription factor | cofit | 34 | 97 |
| | Variovorax sp. SCN45 | GFF965 | | Two-component transcriptional response regulator, LuxR family | no data | 34 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS12255 | | response regulator | insig. | 36 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS15190 | | response regulator | insig. | 36 | 90 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS13480 | | response regulator transcription factor | no data | 35 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15805 | | DNA-binding response regulator | no data | 35 | 98 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01680 | | DNA-binding response regulator | no data | 34 | 98 |
| | Ralstonia solanacearum UW163 | UW163_RS14990 | | DNA-binding response regulator | no data | 34 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03440 | | response regulator | insig. | 39 | 94 |
| | Pseudomonas sp. DMC3 | GFF2809 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 38 | 94 |
| | Lysobacter sp. OAE881 | ABIE51_RS03450 | | response regulator | insig. | 37 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12850 | | LuxR family transcriptional regulator | no data | 35 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00464 | | two component transcriptional regulator, LuxR family | no data | 35 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_002795 | | FixJ family two-component response regulator | no data | 35 | 94 |
| | Sphingobium sp. HT1-2 | GFF5392 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 32 | 94 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4893 | | Nitrogen regulation protein NR(I) | cofit | 33 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22615 | | chemotaxis protein CheY | no data | 39 | 85 |
| | Ralstonia solanacearum GMI1000 | RS_RS08045 | | DNA-binding response regulator | cofit | 34 | 98 |
| o | Pantoea sp. MT58 | IAI47_20285 | | response regulator | insig. | 36 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS05715 | | oxygen response regulator transcription factor FixJ | no data | 35 | 94 |
| | Xanthobacter sp. DMC5 | GFF4035 | | Response regulator protein TmoT | no data | 34 | 92 |
| | Pseudomonas segetis P6 | ACVTMO_RS02215 | | response regulator transcription factor | insig. | 34 | 96 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04570 | | DNA-binding response regulator | no data | 40 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_005786 | | FixJ family two-component response regulator | no data | 37 | 94 |
| | Lysobacter sp. OAE881 | ABIE51_RS09720 | | response regulator | insig. | 34 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06700 | | LuxR family transcriptional regulator | insig. | 34 | 95 |
| | Marinobacter adhaerens HP15 | HP15_1037 | | two-component response regulator | sig. | 34 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23775 | | LuxR family transcriptional regulator | no data | 40 | 83 |
| | Rhodopseudomonas palustris CGA009 | TX73_022010 | | response regulator FixJ | no data | 37 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3828 | | two component transcriptional regulator, LuxR family | insig. | 32 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21035 | | response regulator | insig. | 38 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03404 | | Response regulator | no data | 33 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08340 | | chemotaxis protein CheY | insig. | 34 | 97 |
| | Pseudomonas sp. S08-1 | OH686_18645 | | Two-component transcriptional response regulator, LuxR family | insig. | 33 | 97 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 38 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS15215 | | response regulator | insig. | 34 | 94 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3789 | | two component transcriptional regulator, LuxR family | insig. | 33 | 98 |
| | Sphingobium sp. HT1-2 | GFF3048 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 37 | 85 |
| | Azospirillum sp. SherDot2 | MPMX19_04701 | | Transcriptional regulatory protein FixJ | insig. | 39 | 89 |
| | Dechlorosoma suillum PS | Dsui_3160 | | response regulator | strong | 36 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11910 | | chemotaxis protein CheY | no data | 34 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08335 | | hypothetical protein | insig. | 33 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05022 | | two component transcriptional regulator, LuxR family | insig. | 36 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS16350 | | response regulator | no data | 34 | 98 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS24605 | | DNA-binding response regulator | no data | 42 | 84 |
| | Pseudomonas sp. S08-1 | OH686_18650 | | Response regulator receiver domain, FixJ type | no data | 36 | 97 |
| | Sinorhizobium meliloti 1021 | SMa0941 | | hypothetical protein | insig. | 33 | 94 |
| | Pseudomonas segetis P6 | ACVTMO_RS10065 | | response regulator transcription factor | insig. | 34 | 94 |
| | Xanthobacter sp. DMC5 | GFF3781 | | Transcriptional regulatory protein FixJ | insig. | 36 | 95 |