Homologs of prfB from Desulfovibrio vulgaris Hildenborough JW710

prfB: peptide chain release factor 2, programmed frameshift (TIGR)
SEED: Peptide chain release factor 2; programmed frameshift-containing
KEGG: peptide chain release factor 2

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1861 prfB peptide chain release factor 2, programmed frameshift (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0555 Peptide chain release factor 2 (NCBI) no data 82 100
o Kangiella aquimarina DSM 16071 B158DRAFT_2172 bacterial peptide chain release factor 2 (bRF-2) no data 48 96
o Escherichia coli BW25113 b2891 prfB peptide chain release factor RF-2 (NCBI) no data 48 96
o Enterobacter asburiae PDN3 EX28DRAFT_2942 bacterial peptide chain release factor 2 (bRF-2) no data 47 96
o Magnetospirillum magneticum AMB-1 AMB_RS14145 peptide chain release factor 2 no data 49 88
o Shewanella amazonensis SB2B Sama_2878 peptide chain release factor 2 (RefSeq) no data 49 92
o Rhodospirillum rubrum S1H Rru_A2040 Peptide chain release factor 2 (NCBI) no data 53 81
o Fusobacterium nucleatum SB010 HUW76_08845 peptide chain release factor 2 no data 47 93
o Azospirillum brasilense Sp245 AZOBR_RS11825 peptide chain release factor 2 no data 49 88
o Klebsiella michiganensis M5al BWI76_RS23800 peptide chain release factor 2 no data 49 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2696 bacterial peptide chain release factor 2 (bRF-2) no data 49 88
o Agrobacterium fabrum C58 Atu1342 peptide chain release factor 2 no data 49 87
o Caulobacter crescentus NA1000 CCNA_01950 peptide chain Release factor 2 (RF-2) no data 48 88
o Caulobacter crescentus NA1000 Δfur CCNA_01950 peptide chain Release factor 2 (RF-2) no data 48 88
o Shewanella sp. ANA-3 Shewana3_3297 peptide chain release factor 2 (RefSeq) no data 47 92
o Dechlorosoma suillum PS Dsui_2862 peptide chain release factor 2 no data 47 91
o Dinoroseobacter shibae DFL-12 Dshi_1172 peptide chain release factor 2 (RefSeq) no data 45 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00487 bacterial peptide chain release factor 2 (bRF-2) insig. 44 94
o Sinorhizobium meliloti 1021 SMc01333 peptide chain release factor 2 no data 50 87
o Acinetobacter radioresistens SK82 MPMX26_02915 Peptide chain release factor RF2 no data 46 91
o Phaeobacter inhibens DSM 17395 PGA1_c20270 peptide chain release factor 2 no data 46 90
o Rhodanobacter sp. FW510-T8 OKGIIK_07015 prfB peptide chain release factor 2 no data 49 84
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2200 peptide chain release factor 2 no data 44 97
o Marinobacter adhaerens HP15 HP15_767 peptide chain release factor 2 no data 46 91
o Pseudomonas syringae pv. syringae B728a Psyr_1310 bacterial peptide chain release factor 2 (bRF-2) no data 46 87
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1310 bacterial peptide chain release factor 2 (bRF-2) no data 46 87
o Pseudomonas sp. RS175 PFR28_00358 Peptide chain release factor RF2 no data 45 91
  Escherichia fergusonii Becca EFB2_01010 Peptide chain release factor RF2 no data 53 75
  Escherichia coli ECOR27 NOLOHH_11510 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECOR38 HEPCGN_18875 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECRC101 OKFHMN_19585 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECRC101 MCAODC_10105 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECRC102 NIAGMN_17350 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECRC62 BNILDI_10040 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECRC98 JDDGAC_23225 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli ECRC99 KEDOAH_08555 prfB peptide chain release factor 2 no data 53 75
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00824 Peptide chain release factor RF2 no data 53 75
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3116 Peptide chain release factor 2; programmed frameshift-containing no data 45 91
o Pseudomonas stutzeri RCH2 Psest_1548 peptide chain release factor 2 no data 44 93
  Enterobacter sp. TBS_079 MPMX20_03750 Peptide chain release factor RF2 no data 53 75
o Azospirillum sp. SherDot2 MPMX19_00343 Peptide chain release factor RF2 no data 49 81
o Herbaspirillum seropedicae SmR1 HSERO_RS13990 peptide chain release factor 2 no data 43 88
  Shewanella loihica PV-4 Shew_0811 peptide chain release factor 2 (RefSeq) no data 51 75
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2988 Peptide chain release factor 2; programmed frameshift-containing no data 53 76
o Acidovorax sp. GW101-3H11 Ac3H11_2631 Peptide chain release factor 2; programmed frameshift-containing no data 44 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3041 Peptide chain release factor 2; programmed frameshift-containing no data 49 75
  Pseudomonas fluorescens FW300-N2E3 AO353_04210 peptide chain release factor 2 no data 49 75
o Mycobacterium tuberculosis H37Rv Rv3105c Probable peptide chain release factor 2 PrfB (RF-2) no data 49 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2902.1 Peptide chain release factor 2; programmed frameshift-containing no data 49 80
  Paraburkholderia graminis OAS925 ABIE53_002772 peptide chain release factor 2 no data 49 75
o Pseudomonas sp. S08-1 OH686_06850 peptide chain release factor 2 no data 47 80
  Alteromonas macleodii MIT1002 MIT1002_01215 Peptide chain release factor 2 no data 54 73
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17945 peptide chain release factor 2 no data 43 89
o Bifidobacterium breve UCC2003 BBR_RS13025 peptide chain release factor 2 no data 41 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF276 Peptide chain release factor 2; programmed frameshift-containing no data 48 76
  Pseudomonas fluorescens FW300-N2C3 AO356_06240 peptide chain release factor 2 no data 49 75
  Variovorax sp. SCN45 GFF3116 Peptide chain release factor 2 @ programmed frameshift-containing no data 47 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4750 Peptide chain release factor 2; programmed frameshift-containing no data 48 77
  Pseudomonas simiae WCS417 PS417_06000 peptide chain release factor 2 no data 48 77
  Burkholderia phytofirmans PsJN BPHYT_RS12735 peptide chain release factor 2 no data 53 65
  Cupriavidus basilensis FW507-4G11 RR42_RS06080 peptide chain release factor 2 no data 51 65
  Synechococcus elongatus PCC 7942 Synpcc7942_0404 prfB peptide chain release factor 2 no data 47 75
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12790 peptide chain release factor 2 no data 40 89
o Phocaeicola dorei CL03T12C01 ABI39_RS07800 peptide chain release factor 2 no data 40 89
o Bacteroides stercoris CC31F HMPREF1181_RS02895 peptide chain release factor 2 no data 38 92
  Bacteroides ovatus ATCC 8483 BACOVA_03361 PCRF domain protein no data 42 74
  Bacteroides thetaiotaomicron VPI-5482 BT3552 peptide chain release factor RF-2 (NCBI ptt file) no data 43 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18940 peptide chain release factor 1 no data 39 88
  Magnetospirillum magneticum AMB-1 AMB_RS08175 peptide chain release factor 1 no data 38 88
  Castellaniella sp019104865 MT123 ABCV34_RS14055 peptide chain release factor 1 no data 38 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16975 peptide chain release factor 1 no data 39 88
  Agrobacterium fabrum C58 Atu4174 peptide chain release factor 1 no data 39 91
  Ralstonia solanacearum PSI07 RPSI07_RS10645 peptide chain release factor 1 no data 39 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1445 peptide chain release factor 1 no data 38 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06585 peptide chain release factor 1 no data 39 88
  Ralstonia solanacearum UW163 UW163_RS07040 peptide chain release factor 1 no data 39 88
  Sinorhizobium meliloti 1021 SMc02436 peptide chain release factor 1 no data 36 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1602 peptide chain release factor 1 no data 44 63
  Alteromonas macleodii MIT1002 MIT1002_01514 Peptide chain release factor 1 no data 37 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_10845 peptide chain release factor 1 no data 36 90
  Burkholderia phytofirmans PsJN BPHYT_RS17515 peptide chain release factor 1 no data 39 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS02250 peptide chain release factor 1 no data 38 88
  Cupriavidus basilensis FW507-4G11 RR42_RS18470 peptide chain release factor 1 no data 38 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS27670 peptide chain release factor 1 no data 38 88
  Paraburkholderia graminis OAS925 ABIE53_003663 peptide chain release factor 1 no data 38 88
  Rhizobium sp. OAE497 ABIE40_RS17295 peptide chain release factor 1 no data 38 89
  Ralstonia solanacearum GMI1000 RS_RS14535 peptide chain release factor 1 no data 38 88
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14450 peptide chain release factor 1 no data 37 88
  Azospirillum sp. SherDot2 MPMX19_02447 Peptide chain release factor RF1 no data 44 68
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05692 bacterial peptide chain release factor 1 (bRF-1) no data 39 88
  Azospirillum brasilense Sp245 AZOBR_RS18920 peptide chain release factor 1 no data 43 68
  Desulfovibrio vulgaris Hildenborough JW710 DVU2914 prfA peptide chain release factor 1 (TIGR) no data 35 88
  Fusobacterium nucleatum SB010 HUW76_03580 peptide chain release factor 1 no data 43 66
  Caulobacter crescentus NA1000 CCNA_00899 bacterial peptide chain Release factor 1 (RF-1) no data 36 89
  Caulobacter crescentus NA1000 Δfur CCNA_00899 bacterial peptide chain Release factor 1 (RF-1) no data 36 89
  Rahnella sp. WP5 EX31_RS07315 peptide chain release factor 1 no data 35 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1266 Peptide chain release factor 1 no data 37 89
  Dickeya dadantii 3937 DDA3937_RS10990 peptide chain release factor 1 no data 43 64
  Acinetobacter radioresistens SK82 MPMX26_01174 Peptide chain release factor RF1 no data 39 73