Homologs of ksgA from Desulfovibrio vulgaris Hildenborough JW710

ksgA: dimethyladenosine transferase (TIGR)
SEED: SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)
KEGG: 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1797 ksgA dimethyladenosine transferase (TIGR) sig. 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0501 ksgA dimethyladenosine transferase (RefSeq) insig. 72 98
o Acinetobacter radioresistens SK82 MPMX26_00596 Ribosomal RNA small subunit methyltransferase A no data 37 97
o Pseudomonas sp. RS175 PFR28_04064 Ribosomal RNA small subunit methyltransferase A strong 39 99
o Pseudomonas fluorescens SBW25 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 38 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 38 98
o Acinetobacter baumannii LAC-4 RR41_RS02585 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA sig. 38 96
o Pantoea sp. MT58 IAI47_16085 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 38 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12910 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 38 97
o Pseudomonas sp. DMC3 GFF37 Ribosomal RNA small subunit methyltransferase A cofit 38 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05282 Ribosomal RNA small subunit methyltransferase A cofit 38 98
o Pseudomonas fluorescens FW300-N2E3 AO353_07315 rRNA methyltransferase sig. 38 97
o Pseudomonas simiae WCS417 PS417_25810 ribosomal RNA small subunit methyltransferase A no data 38 98
o Marinobacter adhaerens HP15 HP15_3278 dimethyladenosine transferase strong 39 96
o Pseudomonas fluorescens FW300-N2C3 AO356_14335 rRNA methyltransferase strong 38 97
o Escherichia fergusonii Becca EFB2_03992 Ribosomal RNA small subunit methyltransferase A sig. 37 98
o Escherichia coli Nissle 1917 ECOLIN_RS00285 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 37 98
o Enterobacter asburiae PDN3 EX28DRAFT_3645 ribosomal RNA small subunit methyltransferase A strong 37 98
o Escherichia coli ECOR27 NOLOHH_03180 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA no data 37 98
o Azospirillum sp. SherDot2 MPMX19_01514 Ribosomal RNA small subunit methyltransferase A no data 41 92
o Azospirillum brasilense Sp245 AZOBR_RS16340 16S rRNA methyltransferase sig. 40 96
o Kangiella aquimarina DSM 16071 B158DRAFT_0788 dimethyladenosine transferase sig. 36 98
o Pseudomonas sp. S08-1 OH686_15040 ribosomal RNA small subunit methyltransferase A strong 38 97
o Pseudomonas orientalis W4I3 QF045_RS00210 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 37 98
o Escherichia coli BL21 ECD_00055 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent no data 37 98
o Escherichia coli ECOR38 HEPCGN_08825 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA strong 37 98
o Escherichia coli ECRC100 OKFHMN_10835 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA no data 37 98
o Escherichia coli ECRC101 MCAODC_01350 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA sig. 37 98
o Escherichia coli ECRC102 NIAGMN_08685 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA no data 37 98
o Escherichia coli ECRC98 JDDGAC_14430 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA strong 37 98
o Escherichia coli ECRC99 KEDOAH_17320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA no data 37 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03605 Ribosomal RNA small subunit methyltransferase A sig. 37 98
o Escherichia coli BW25113 b0051 ksgA dimethyladenosine transferase (NCBI) strong 37 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) no data 39 97
o Escherichia coli ECRC62 BNILDI_08425 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA insig. 36 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF190 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) sig. 36 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2528 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) no data 37 97
o Shewanella loihica PV-4 Shew_0879 ksgA dimethyladenosine transferase (RefSeq) no data 36 95
o Enterobacter sp. TBS_079 MPMX20_00747 Ribosomal RNA small subunit methyltransferase A strong 37 98
o Shewanella sp. ANA-3 Shewana3_3209 ksgA dimethyladenosine transferase (RefSeq) no data 37 97
o Agrobacterium fabrum C58 Atu1103 rRNA-adenine N6,N6-dimethyltransferase sig. 41 96
o Herbaspirillum seropedicae SmR1 HSERO_RS03540 dimethyladenosine transferase insig. 40 96
o Alteromonas macleodii MIT1002 MIT1002_00781 Ribosomal RNA small subunit methyltransferase A cofit 38 97
o Pseudomonas sp. SVBP6 COO64_RS22510 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 37 97
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06165 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA no data 36 95
o Erwinia tracheiphila SCR3 LU632_RS02730 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 36 95
o Serratia liquefaciens MT49 IAI46_03245 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 38 95
o Shewanella oneidensis MR-1 SO3639 ksgA dimethyladenosine transferase (NCBI ptt file) strong 36 97
o Klebsiella michiganensis M5al BWI76_RS04520 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase no data 36 98
o Pseudomonas aeruginosa MRSN321 DY961_RS22990 rsmA;go_function=rRNA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA sig. 38 97
o Pseudomonas aeruginosa PA14 IKLFDK_22450 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA strong 38 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1200 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) no data 36 97
o Shewanella amazonensis SB2B Sama_2819 ksgA dimethyladenosine transferase (RefSeq) no data 37 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS36360 rsmA;go_function=rRNA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA strong 38 97
o Klebsiella pneumoniae MKP103 KDGMDA_12745 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA sig. 36 95
o Bacteroides thetaiotaomicron VPI-5482 BT4043 dimethyladenosine transferase (NCBI ptt file) strong 36 97
o Pseudomonas segetis P6 ACVTMO_RS04355 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 37 97
o Pseudomonas syringae pv. syringae B728a Psyr_4627 dimethyladenosine transferase insig. 35 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4627 dimethyladenosine transferase insig. 35 99
o Erwinia amylovora T8 OLJFJH_01370 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA sig. 37 95
o Pectobacterium carotovorum WPP14 HER17_RS02960 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 36 95
o Rhodospirillum rubrum S1H Rru_A0431 16S rRNA dimethylase (NCBI) no data 41 94
o Dechlorosoma suillum PS Dsui_0039 dimethyladenosine transferase sig. 39 97
o Pseudomonas sp. BP01 JOY50_RS18140 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 39 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_02325 ribosomal RNA small subunit methyltransferase A no data 36 96
o Dickeya dadantii 3937 DDA3937_RS18265 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 36 95
o Dinoroseobacter shibae DFL-12 Dshi_1185 dimethyladenosine transferase (RefSeq) strong 40 97
o Pseudomonas putida KT2440 PP_0401 Ribosomal RNA small subunit methyltransferase A strong 38 97
o Dickeya dianthicola 67-19 HGI48_RS18200 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 36 95
o Dickeya dianthicola ME23 DZA65_RS19340 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 36 95
o Cellulophaga baltica 18 M666_RS06845 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 35 99
o Methylophilus sp. DMC18 GFF260 Ribosomal RNA small subunit methyltransferase A insig. 35 97
o Rhizobium sp. OAE497 ABIE40_RS06390 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 39 96
o Bacteroides ovatus ATCC 8483 BACOVA_04832 dimethyladenosine transferase sig. 36 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4271.1 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) sig. 38 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11270 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 40 97
o Rhodanobacter sp. FW510-T8 OKGIIK_11625 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA sig. 39 97
o Rhodanobacter denitrificans MT42 LRK55_RS12040 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 38 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12305 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 38 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14130 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 35 97
o Bacteroides stercoris CC31F HMPREF1181_RS09125 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 35 97
o Xanthobacter sp. DMC5 GFF4145 Ribosomal RNA small subunit methyltransferase A insig. 39 97
o Phocaeicola dorei CL03T12C01 ABI39_RS09780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA sig. 36 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16190 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 40 97
o Caulobacter crescentus NA1000 CCNA_01757 dimethyladenosine transferase cofit 38 96
o Caulobacter crescentus NA1000 Δfur CCNA_01757 dimethyladenosine transferase cofit 38 96
o Pseudomonas stutzeri RCH2 Psest_3668 dimethyladenosine transferase no data 37 97
o Sinorhizobium meliloti 1021 SMc00579 dimethyladenosine transferase sig. 40 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS07710 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 38 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04880 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA strong 38 95
o Rahnella sp. WP5 EX31_RS03780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 35 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11755 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 39 99
o Ralstonia solanacearum UW163 UW163_RS01830 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 39 99
o Lysobacter sp. OAE881 ABIE51_RS05385 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA sig. 36 97
o Variovorax sp. OAS795 ABID97_RS02525 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA sig. 36 96
o Ralstonia solanacearum GMI1000 RS_RS02580 ribosomal RNA small subunit methyltransferase A insig. 39 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06760 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no data 38 96
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00050 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 32 97
o Ralstonia solanacearum PSI07 RPSI07_RS21460 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA insig. 38 99
o Magnetospirillum magneticum AMB-1 AMB_RS18820 dimethyladenosine transferase no data 38 96