Homologs of SO4324 from Shewanella oneidensis MR-1

GGDEF domain protein (NCBI ptt file)
SEED: GAF domain/GGDEF domain/EAL domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4324 GGDEF domain protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0375 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) insig. 91 100
o Shewanella loihica PV-4 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) cofit 58 98
o Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 58 96
o Alteromonas macleodii MIT1002 MIT1002_00072 Bacteriophytochrome cph2 strong 37 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18930 EAL domain-containing protein insig. 34 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS04560 EAL domain-containing protein insig. 34 96
o Rhodanobacter sp. FW510-T8 OKGIIK_01360 Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain insig. 34 96
o Rhodanobacter denitrificans MT42 LRK55_RS10715 EAL domain-containing protein insig. 35 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11010 EAL domain-containing protein insig. 35 96
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03860 EAL domain-containing protein insig. 34 96
  Rhodanobacter denitrificans MT42 LRK55_RS05220 EAL domain-containing protein cofit 33 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05445 EAL domain-containing protein insig. 33 96
  Rhodanobacter sp. FW510-T8 OKGIIK_12865 Diguanylate cyclase insig. 33 96
o Lysobacter sp. OAE881 ABIE51_RS13765 EAL domain-containing protein sig. 32 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS13125 EAL domain-containing protein insig. 33 96
o Paraburkholderia graminis OAS925 ABIE53_001117 diguanylate cyclase (GGDEF)-like protein insig. 34 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01564 diguanylate cyclase/phosphodiesterase insig. 32 97
o Pseudomonas syringae pv. syringae B728a Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 31 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 31 95
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 27 73
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 33 50
  Desulfovibrio vulgaris Hildenborough JW710 DVU2432 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 28 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU1190 sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 34 49
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 49
  Synechocystis sp000284455 PCC 6803 SGL_RS06175 EAL domain-containing protein insig. 34 50
  Synechocystis sp000284455 PCC 6803 SGL_RS12855 EAL domain-containing protein insig. 34 49
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 33 50
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 48
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 32 50
  Desulfovibrio vulgaris Miyazaki F DvMF_3083 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 30 49
  Rhodopseudomonas palustris CGA009 TX73_005760 EAL domain-containing protein strong 32 54
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 34 48
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 31 50
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 31 49
  Acidovorax sp. GW101-3H11 Ac3H11_446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 31 53
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 33 49
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 31 50
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 31 50
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 33 49
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 32 50
  Azospirillum brasilense Sp245 AZOBR_RS19995 Diguanylate cyclase/phosphodiesterase with PAS/PAC domain strong 32 49
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 33 50
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 33 50
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 30 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU1414 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 33 49
  Desulfovibrio vulgaris Hildenborough JW710 DVU0717 GGDEF domain/EAL domain protein (TIGR) insig. 33 50
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 33 49
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 33 49
  Synechococcus elongatus PCC 7942 Synpcc7942_2519 diguanylate cyclase/phosphodiesterase insig. 32 53
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 32 50
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 33 49
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 50
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 32 48
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 30 49
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 30 50
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 33 49
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 49
  Cupriavidus basilensis FW507-4G11 RR42_RS37310 diguanylate cyclase insig. 32 49
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 33 49
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 32 50
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 32 49
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 32 48
  Acidovorax sp. GW101-3H11 Ac3H11_4268 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 49
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 32 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 32 49
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 31 48
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 30 49
  Desulfovibrio vulgaris Hildenborough JW710 DVU3064 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 32 49
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 34 51
  Pseudomonas aeruginosa PA14 IKLFDK_08335 Uncharacterized signaling protein PA1727 sig. 33 51
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 32 48
  Pseudomonas sp. DMC3 GFF1254 hypothetical protein insig. 33 46
  Pseudomonas sp. BP01 JOY50_RS16640 PAS domain S-box protein insig. 31 50
  Ralstonia sp. UNC404CL21Col ABZR87_RS23350 EAL domain-containing protein insig. 31 49
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 31 50
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 31 50
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 31 50
  Pseudomonas sp. BP01 JOY50_RS07990 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 48
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 32 47
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 31 52
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 30 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 31 50
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 32 49
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 31 49
  Bosea sp. OAE506 ABIE41_RS24040 EAL domain-containing protein strong 31 48
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 33 49
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 33 49
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 31 50
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 32 49
  Pseudomonas segetis P6 ACVTMO_RS15240 PAS domain S-box protein insig. 31 50
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 32 48
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 49
  Pseudomonas aeruginosa PUPa3 DQ20_RS54400 bifunctional diguanylate cyclase/phosphodiesterase cofit 33 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 32 49
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 31 50
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 31 49
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 31 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 31 50
  Azospirillum sp. SherDot2 MPMX19_01476 hypothetical protein insig. 31 50