Conservation of cofitness between TX73_013920 and TX73_010150 in Rhodopseudomonas palustris CGA009

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_013920 4-hydroxy-tetrahydrodipicolinate synthase 1.0 TX73_010150 tRNA dihydrouridine(20/20a) synthase DusA 0.57 11
Bosea sp. OAE506 0.76 ABIE41_RS19960 4-hydroxy-tetrahydrodipicolinate synthase 0.62 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA — —
Dinoroseobacter shibae DFL-12 0.60 Dshi_0149 dihydrodipicolinate synthase (RefSeq) 0.49 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) — —
Sinorhizobium meliloti 1021 0.60 SMc02404 dihydrodipicolinate synthase 0.46 SMc04235 tRNA-dihydrouridine synthase A — —
Agrobacterium fabrum C58 0.60 Atu1024 dihydrodipicolinate synthase 0.54 Atu1515 hypothetical protein — —
Rhizobium sp. OAE497 0.60 ABIE40_RS06030 4-hydroxy-tetrahydrodipicolinate synthase 0.55 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA — —
Azospirillum sp. SherDot2 0.60 MPMX19_01219 4-hydroxy-tetrahydrodipicolinate synthase 0.58 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase — —
Rhodospirillum rubrum S1H 0.58 Rru_A1865 Dihydrodipicolinate synthase subfamily (NCBI) 0.50 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) low > 58
Azospirillum brasilense Sp245 0.58 AZOBR_RS08420 dihydrodipicolinate synthase 0.58 AZOBR_RS15935 tRNA-dihydrouridine synthase A — —
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01253 dihydrodipicolinate synthase 0.58 CCNA_01364 NIFR3-like protein — —
Caulobacter crescentus NA1000 0.56 CCNA_01253 dihydrodipicolinate synthase 0.58 CCNA_01364 NIFR3-like protein — —
Phaeobacter inhibens DSM 17395 0.55 PGA1_c28930 dihydrodipicolinate synthase DapA 0.49 PGA1_c19230 tRNA-dihydrouridine synthase A — —
Pseudomonas sp. RS175 0.43 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase 0.47 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase — —
Pseudomonas fluorescens SBW25 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.49 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.49 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.29 19
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_04530 4-hydroxy-tetrahydrodipicolinate synthase 0.47 AO356_02170 tRNA-dihydrouridine synthase A — —
Variovorax sp. OAS795 0.43 ABID97_RS20125 4-hydroxy-tetrahydrodipicolinate synthase 0.49 ABID97_RS13915 tRNA dihydrouridine(20/20a) synthase DusA low > 91
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.48 Pf6N2E2_2257 tRNA dihydrouridine synthase A — —
Ralstonia solanacearum GMI1000 0.43 RS_RS05700 4-hydroxy-tetrahydrodipicolinate synthase 0.51 RS_RS06510 tRNA dihydrouridine(20/20a) synthase DusA low > 80
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS14890 4-hydroxy-tetrahydrodipicolinate synthase 0.49 RALBFv3_RS15730 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4507 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.44 PfGW456L13_3987 tRNA dihydrouridine synthase A low > 87
Ralstonia solanacearum UW163 0.43 UW163_RS12360 4-hydroxy-tetrahydrodipicolinate synthase 0.49 UW163_RS13175 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1548 dihydrodipicolinate synthase 0.50 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase — —
Pseudomonas simiae WCS417 0.43 PS417_07165 dihydrodipicolinate synthase 0.49 PS417_07740 tRNA-dihydrouridine synthase A low > 88
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1548 dihydrodipicolinate synthase 0.50 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3332 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.48 Pf1N1B4_57 tRNA dihydrouridine synthase A — —
Variovorax sp. SCN45 0.43 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.47 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) low > 127
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS05475 4-hydroxy-tetrahydrodipicolinate synthase 0.57 A4249_RS10515 tRNA dihydrouridine(20/20a) synthase DusA — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS18470 4-hydroxy-tetrahydrodipicolinate synthase 0.49 RPSI07_RS17630 tRNA dihydrouridine(20/20a) synthase DusA low > 81
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10545 4-hydroxy-tetrahydrodipicolinate synthase 0.50 ABZR87_RS11300 tRNA dihydrouridine(20/20a) synthase DusA — —
Klebsiella michiganensis M5al 0.42 BWI76_RS20905 4-hydroxy-tetrahydrodipicolinate synthase 0.54 BWI76_RS01900 tRNA-dihydrouridine synthase A — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS05940 4-hydroxy-tetrahydrodipicolinate synthase 0.53 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_17670 4-hydroxy-tetrahydrodipicolinate synthase 0.47 AO353_00295 tRNA-dihydrouridine synthase A — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS06250 dihydrodipicolinate synthase 0.49 RR42_RS12665 tRNA-dihydrouridine synthase A low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16395 dihydrodipicolinate synthase 0.52 HSERO_RS17905 tRNA-dihydrouridine synthase A — —
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0182 4-hydroxy-tetrahydrodipicolinate synthase 0.54 EX28DRAFT_4263 tRNA dihydrouridine synthase A — —
Acinetobacter radioresistens SK82 0.41 MPMX26_02982 4-hydroxy-tetrahydrodipicolinate synthase 0.50 MPMX26_00482 tRNA-dihydrouridine(20/20a) synthase — —
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2444 dihydrodipicolinate synthase 0.52 B158DRAFT_2018 tRNA dihydrouridine synthase A — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2180 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.54 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS12615 dihydrodipicolinate synthase 0.51 BPHYT_RS08700 tRNA-dihydrouridine synthase A low > 109
Enterobacter sp. TBS_079 0.41 MPMX20_03340 4-hydroxy-tetrahydrodipicolinate synthase 0.54 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase — —
Pseudomonas stutzeri RCH2 0.41 Psest_1515 dihydrodipicolinate synthase 0.49 Psest_2706 tRNA dihydrouridine synthase A — —
Pseudomonas sp. S08-1 0.41 OH686_19215 4-hydroxy-tetrahydrodipicolinate synthase 0.48 OH686_22745 tRNA-dihydrouridine(20/20a) synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00509 dihydrodipicolinate synthase 0.50 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase — —
Paraburkholderia graminis OAS925 0.40 ABIE53_002749 4-hydroxy-tetrahydrodipicolinate synthase 0.49 ABIE53_001975 tRNA-dihydrouridine synthase A — —
Erwinia tracheiphila SCR3 0.40 LU632_RS08325 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.53 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC98 0.40 JDDGAC_25860 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF5565 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.48 GFF4791 tRNA dihydrouridine synthase A — —
Pantoea sp. MT58 0.40 IAI47_05265 4-hydroxy-tetrahydrodipicolinate synthase 0.55 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECOR38 0.40 HEPCGN_21085 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC101 0.40 MCAODC_12445 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.54 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01251 4-hydroxy-tetrahydrodipicolinate synthase 0.55 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase — —
Escherichia coli ECRC102 0.40 NIAGMN_19685 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia fergusonii Becca 0.40 EFB2_01408 4-hydroxy-tetrahydrodipicolinate synthase 0.54 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase — —
Escherichia coli ECRC62 0.40 BNILDI_12385 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli BL21 0.40 ECD_02370 dihydrodipicolinate synthase 0.54 ECD_03921 tRNA-dihydrouridine synthase A — —
Escherichia coli ECOR27 0.40 NOLOHH_13575 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC99 0.40 KEDOAH_06305 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC100 0.40 OKFHMN_21915 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli BW25113 0.40 b2478 dapA dihydrodipicolinate synthase (NCBI) 0.54 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14145 4-hydroxy-tetrahydrodipicolinate synthase 0.55 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA — —
Pseudomonas putida KT2440 0.40 PP_1237 4-hydroxy-tetrahydrodipicolinate synthase 0.51 PP_2169 tRNA-dihydrouridine synthase A low > 96
Dickeya dadantii 3937 0.40 DDA3937_RS06065 4-hydroxy-tetrahydrodipicolinate synthase 0.57 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS15415 4-hydroxy-tetrahydrodipicolinate synthase 0.56 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA — —
Rahnella sp. WP5 0.40 EX31_RS22740 4-hydroxy-tetrahydrodipicolinate synthase 0.57 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA low > 89
Dickeya dianthicola 67-19 0.40 HGI48_RS06110 4-hydroxy-tetrahydrodipicolinate synthase 0.57 HGI48_RS17540 tRNA dihydrouridine(20/20a) synthase DusA — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_277 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.48 Ac3H11_2288 tRNA dihydrouridine synthase A low > 79
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15825 4-hydroxy-tetrahydrodipicolinate synthase 0.45 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA — —
Serratia liquefaciens MT49 0.39 IAI46_18780 4-hydroxy-tetrahydrodipicolinate synthase 0.55 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS06460 4-hydroxy-tetrahydrodipicolinate synthase 0.57 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA — —
Marinobacter adhaerens HP15 0.39 HP15_2027 dihydrodipicolinate synthase 0.51 HP15_2240 tRNA-dihydrouridine synthase, TIM-barrel, YjbN — —
Alteromonas macleodii MIT1002 0.38 MIT1002_02207 4-hydroxy-tetrahydrodipicolinate synthase 0.51 MIT1002_03387 putative tRNA-dihydrouridine synthase — —
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_10755 4-hydroxy-tetrahydrodipicolinate synthase 0.57 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA — —
Shewanella loihica PV-4 0.36 Shew_1848 dihydrodipicolinate synthase (RefSeq) 0.56 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) — —
Shewanella amazonensis SB2B 0.36 Sama_1908 dihydrodipicolinate synthase (RefSeq) 0.57 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) — —
Shewanella oneidensis MR-1 0.35 SO1879 dapA dihydrodipicolinate synthase (NCBI ptt file) 0.56 SO3912 TIM-barrel protein, yjbN family (NCBI ptt file) — —
Shewanella sp. ANA-3 0.35 Shewana3_1656 dihydrodipicolinate synthase (RefSeq) 0.56 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS00785 4-hydroxy-tetrahydrodipicolinate synthase 0.55 ABZR86_RS18350 tRNA dihydrouridine(20/20a) synthase DusA — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14800 4-hydroxy-tetrahydrodipicolinate synthase 0.55 LRK55_RS05750 tRNA dihydrouridine(20/20a) synthase DusA — —
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15085 4-hydroxy-tetrahydrodipicolinate synthase 0.55 LRK54_RS05995 tRNA dihydrouridine(20/20a) synthase DusA — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1847 dapA dihydrodipicolinate synthase 0.55 Synpcc7942_2066 tRNA-dihydrouridine synthase A — —
Lysobacter sp. OAE881 0.28 ABIE51_RS07995 4-hydroxy-tetrahydrodipicolinate synthase 0.53 ABIE51_RS03925 tRNA dihydrouridine(20/20a) synthase DusA — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03855 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.55 OKGIIK_00625 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3085.1 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.53 Xcc-8004.5010.1 tRNA dihydrouridine synthase A — —

Not shown: 18 genomes with orthologs for TX73_013920 only; 0 genomes with orthologs for TX73_010150 only