| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_001590 | | ATP-dependent protease ATPase subunit HslU | 1.0 | TX73_001410 | | ubiquinone biosynthesis hydroxylase | 0.44 | 14 |
| Bosea sp. OAE506 | 0.78 | ABIE41_RS04445 | | ATP-dependent protease ATPase subunit HslU | 0.53 | ABIE41_RS04770 | | ubiquinone biosynthesis hydroxylase | — | — |
| Rhizobium sp. OAE497 | 0.76 | ABIE40_RS19475 | | ATP-dependent protease ATPase subunit HslU | 0.51 | ABIE40_RS18435 | | ubiquinone biosynthesis hydroxylase | — | — |
| Sinorhizobium meliloti 1021 | 0.75 | SMc02577 | | ATP-dependent protease ATP-binding subunit HslU | 0.49 | SMc03804 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Agrobacterium fabrum C58 | 0.75 | Atu0045 | | heat shock chaperone | 0.51 | Atu2755 | | putative 2-octaprenyl-6-methoxyphenol | — | — |
| Azospirillum sp. SherDot2 | 0.72 | MPMX19_02549 | | ATP-dependent protease ATPase subunit HslU | 0.39 | MPMX19_05522 | | Ubiquinone hydroxylase UbiL | — | — |
| Azospirillum brasilense Sp245 | 0.72 | AZOBR_RS01650 | | ATP-dependent protease | 0.41 | AZOBR_RS02285 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Rhodospirillum rubrum S1H | 0.71 | Rru_A3600 | | Heat shock protein HslU (NCBI) | 0.35 | Rru_A3707 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (NCBI) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.71 | AMB_RS22955 | | ATP-dependent protease ATPase subunit HslU | 0.36 | AMB_RS00070 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.69 | PGA1_c35240 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.40 | PGA1_c33260 | | protein VisC-like protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.67 | Dshi_3441 | | heat shock protein HslVU, ATPase subunit HslU (RefSeq) | 0.39 | Dshi_0062 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family (RefSeq) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.65 | A4249_RS10990 | | ATP-dependent protease ATPase subunit HslU | 0.35 | A4249_RS13315 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.63 | CCNA_03844 | | ATP-dependent endopeptidase hsl ATP-binding subunit HslU | 0.36 | CCNA_00106 | | 2-polyprenyl-6-methoxyphenol hydroxylase | — | — |
| Caulobacter crescentus NA1000 | 0.63 | CCNA_03844 | | ATP-dependent endopeptidase hsl ATP-binding subunit HslU | 0.36 | CCNA_00106 | | 2-polyprenyl-6-methoxyphenol hydroxylase | — | — |
| Pantoea sp. MT58 | 0.61 | IAI47_00845 | | HslU--HslV peptidase ATPase subunit | 0.27 | IAI47_03760 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Erwinia tracheiphila SCR3 | 0.60 | LU632_RS19675 | hslU | HslU--HslV peptidase ATPase subunit | 0.27 | LU632_RS05885 | ubiH | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Shewanella loihica PV-4 | 0.60 | Shew_0374 | hslU | ATP-dependent protease ATP-binding subunit (RefSeq) | 0.24 | Shew_3065 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.60 | CSW01_13510 | | HslU--HslV peptidase ATPase subunit | 0.26 | CSW01_12520 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Dickeya dadantii 3937 | 0.60 | DDA3937_RS00915 | | HslU--HslV peptidase ATPase subunit | 0.25 | DDA3937_RS02390 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.60 | Ga0059261_3339 | | ATP-dependent protease HslVU, ATPase subunit | 0.31 | Ga0059261_2172 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS05120 | | ATP-dependent protease ATPase subunit HslU | 0.21 | ABZR87_RS02195 | | UbiH/UbiF family hydroxylase | — | — |
| Escherichia coli ECRC62 | 0.59 | BNILDI_05645 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | BNILDI_09960 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | low | > 75 |
| Escherichia fergusonii Becca | 0.59 | EFB2_04687 | | ATP-dependent protease ATPase subunit HslU | 0.25 | EFB2_00996 | | 2-octaprenylphenol hydroxylase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF2313 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.24 | GFF3008 | | 2-octaprenyl-6-methoxyphenol hydroxylase (EC 1.14.13.-) | — | — |
| Escherichia coli Nissle 1917 | 0.59 | ECOLIN_RS22635 | | HslU--HslV peptidase ATPase subunit | 0.24 | ECOLIN_RS16180 | | FAD-dependent 2-octaprenylphenol hydroxylase | low | > 55 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04538 | | ATP-dependent protease ATPase subunit HslU | 0.24 | MPMX20_03766 | | 2-octaprenyl-6-methoxyphenol hydroxylase | — | — |
| Escherichia coli ECOR38 | 0.59 | HEPCGN_12385 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | HEPCGN_18805 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_3700 | hslU | ATP-dependent protease ATP-binding subunit HslU (RefSeq) | 0.25 | Shewana3_3502 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (RefSeq) | — | — |
| Escherichia coli ECRC101 | 0.59 | MCAODC_04240 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | MCAODC_10035 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli BW25113 | 0.59 | b3931 | hslU | ATP-dependent protease ATP-binding subunit (NCBI) | 0.25 | b2906 | visC | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.59 | KEDOAH_14420 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | KEDOAH_08625 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Marinobacter adhaerens HP15 | 0.59 | HP15_465 | | heat shock protein HslVU, ATPase subunit HslU | 0.27 | HP15_3201 | | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | low | > 73 |
| Escherichia coli ECRC100 | 0.59 | OKFHMN_13740 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | OKFHMN_19515 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | low | > 80 |
| Escherichia coli ECOR27 | 0.59 | NOLOHH_05885 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | NOLOHH_11425 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | low | > 75 |
| Escherichia coli ECRC102 | 0.59 | NIAGMN_11495 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | NIAGMN_17280 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli ECRC98 | 0.59 | JDDGAC_17365 | hslU | HslU--HslV peptidase ATPase subunit | 0.25 | JDDGAC_23155 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.59 | OHPLBJKB_04120 | | ATP-dependent protease ATPase subunit HslU | 0.24 | OHPLBJKB_00809 | | 2-octaprenylphenol hydroxylase | low | > 73 |
| Escherichia coli BL21 | 0.59 | ECD_03816 | | molecular chaperone and ATPase component of HslUV protease | 0.25 | ECD_02738 | | 2-octaprenylphenol hydroxylase, FAD-dependent | low | > 61 |
| Rahnella sp. WP5 | 0.59 | EX31_RS14245 | | HslU--HslV peptidase ATPase subunit | 0.27 | EX31_RS21505 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_03659 | | Unfoldase HslU | 0.24 | MIT1002_02982 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS20460 | | HslU--HslV peptidase ATPase subunit | 0.26 | HGI48_RS02345 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Dickeya dianthicola ME23 | 0.59 | DZA65_RS21505 | | HslU--HslV peptidase ATPase subunit | 0.26 | DZA65_RS02450 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Shewanella oneidensis MR-1 | 0.59 | SO4163 | hslU | heat shock protein HslVU, ATPase subunit HslU (NCBI ptt file) | 0.25 | SO0778 | | oxidoreductase, FAD-binding, UbiH/Coq6 family (NCBI ptt file) | — | — |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS00210 | | HslU--HslV peptidase ATPase subunit | 0.20 | RS_RS14495 | | ubiquinone biosynthesis hydroxylase UbiH | — | — |
| Serratia liquefaciens MT49 | 0.59 | IAI46_24575 | | HslU--HslV peptidase ATPase subunit | 0.24 | IAI46_20865 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Shewanella amazonensis SB2B | 0.59 | Sama_0440 | hslU | ATP-dependent protease ATP-binding subunit HslU (RefSeq) | 0.24 | Sama_2722 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) | — | — |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS23740 | | ATP-dependent protease ATPase subunit HslU | 0.21 | RPSI07_RS10685 | | ubiquinone biosynthesis hydroxylase UbiH | — | — |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_4404 | | ATP-dependent protease HslVU, ATPase subunit | 0.24 | EX28DRAFT_2959 | | 2-polyprenyl-6-methoxyphenol 4-hydroxylase | — | — |
| Acidovorax sp. GW101-3H11 | 0.59 | Ac3H11_2005 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.13 | Ac3H11_4879 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | low | > 79 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_12425 | | ATP-dependent protease ATP-binding subunit HslU | 0.29 | AO353_08750 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS00850 | | HslU--HslV peptidase ATPase subunit | 0.27 | HER17_RS19120 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS01065 | | ATP-dependent protease ATP-binding subunit HslU | 0.18 | RR42_RS18360 | | ubiquinone biosynthesis protein | — | — |
| Dechlorosoma suillum PS | 0.58 | Dsui_0580 | | ATP-dependent protease HslVU, ATPase subunit | 0.20 | Dsui_1092 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF553 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.15 | GFF625 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS09625 | | ATP-dependent protease ATPase subunit HslU | 0.20 | RALBFv3_RS06545 | | ubiquinone biosynthesis protein | — | — |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS03955 | | ATP-dependent protease ATPase subunit HslU | 0.20 | UW163_RS07080 | | ubiquinone biosynthesis protein | — | — |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS00750 | | ATP-dependent protease ATP-binding subunit HslU | 0.26 | BWI76_RS23890 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Pseudomonas sp. RS175 | 0.58 | PFR28_04998 | | ATP-dependent protease ATPase subunit HslU | 0.28 | PFR28_04319 | | 2-octaprenylphenol hydroxylase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS15040 | | ATP-dependent protease ATPase subunit HslU | 0.22 | ABZR86_RS11225 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS03045 | | ATP-dependent protease ATPase subunit HslU | 0.22 | ABIE51_RS05430 | | FAD-dependent oxidoreductase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.58 | Xcc-8004.852.1 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.22 | Xcc-8004.4261.1 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Variovorax sp. SCN45 | 0.58 | GFF4483 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.15 | GFF2133 | | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_1553 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.28 | Pf1N1B4_2231 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.57 | LRK54_RS08520 | | ATP-dependent protease ATPase subunit HslU | 0.23 | LRK54_RS12345 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.57 | OKGIIK_15315 | hslU | ATP-dependent protease ATPase subunit HslU | 0.21 | OKGIIK_11585 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0394 | | Heat shock protein HslU | 0.27 | Psyr_0323 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase | — | — |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS06185 | | ATP-dependent protease ATPase subunit HslU | 0.14 | ABID97_RS24790 | | FAD-dependent monooxygenase | — | — |
| Pseudomonas putida KT2440 | 0.57 | PP_5001 | | protease HslVU, ATPase component | 0.27 | PP_5197 | | putative oxidoreductase involved in anerobic synthesis of ubiquinone, FAD/NAD(P)-binding domain | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0394 | | Heat shock protein HslU | 0.27 | Psyr_0323 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase | — | — |
| Pseudomonas fluorescens SBW25 | 0.57 | PFLU_RS01960 | | ATP-dependent protease ATPase subunit HslU | 0.29 | PFLU_RS28930 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.57 | PFLU_RS01960 | | ATP-dependent protease ATPase subunit HslU | 0.29 | PFLU_RS28930 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3937 | | ATP-dependent protease HslVU, ATPase subunit | 0.26 | Psest_0178 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Paraburkholderia graminis OAS925 | 0.56 | ABIE53_000421 | | ATP-dependent HslUV protease ATP-binding subunit HslU | 0.23 | ABIE53_003649 | | 2-octaprenylphenol hydroxylase | — | — |
| Pseudomonas simiae WCS417 | 0.56 | PS417_01915 | | ATP-dependent protease ATP-binding subunit HslU | 0.29 | PS417_27270 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_02207 | | ATP-dependent HslUV protease ATP-binding subunit HslU | 0.23 | H281DRAFT_05706 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS01630 | | ATP-dependent protease ATPase subunit HslU | 0.23 | BPHYT_RS17435 | | ubiquinone biosynthesis hydroxylase UbiH | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_09460 | | ATP-dependent protease ATP-binding subunit HslU | 0.28 | AO356_13020 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_3770 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.29 | Pf6N2E2_4482 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS00915 | | ATP-dependent protease | 0.21 | HSERO_RS20960 | | oxygenase | — | — |
| Kangiella aquimarina DSM 16071 | 0.56 | B158DRAFT_0747 | | ATP-dependent protease HslVU, ATPase subunit | 0.25 | B158DRAFT_0537 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Pseudomonas sp. S08-1 | 0.56 | OH686_10100 | | ATP-dependent protease HslVU, ATPase subunit | 0.28 | OH686_11190 | | 2-polyprenylphenol hydroxylase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_290 | | ATP-dependent hsl protease ATP-binding subunit HslU | 0.28 | PfGW456L13_899 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS00330 | | ATP-dependent protease ATPase subunit HslU | 0.21 | QEN71_RS27595 | | UbiH/UbiF family hydroxylase | — | — |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS13410 | | ATP-dependent protease ATPase subunit HslU | 0.17 | ABCV34_RS10260 | | FAD-dependent monooxygenase | — | — |
Not shown: 4 genomes with orthologs for TX73_001590 only; 4 genomes with orthologs for TX73_001410 only