Conservation of cofitness between SMc00450 and SMc01215 in Sinorhizobium meliloti 1021

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00450 protoheme IX farnesyltransferase 1.0 SMc01215 carbamoyl phosphate synthase large subunit 0.51 12
Rhizobium sp. OAE497 0.69 ABIE40_RS04070 heme o synthase 0.90 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.65 Atu0769 protoheme IX farnesyltransferase 0.91 Atu2178 carbamoylphosphate synthase large subunit
Bosea sp. OAE506 0.48 ABIE41_RS22955 heme o synthase 0.70 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Azospirillum sp. SherDot2 0.47 MPMX19_00886 Protoheme IX farnesyltransferase 0.62 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Azospirillum brasilense Sp245 0.45 AZOBR_RS10580 protoheme IX farnesyltransferase 0.63 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Rhodopseudomonas palustris CGA009 0.45 TX73_004295 heme o synthase 0.71 TX73_021090 carbamoyl-phosphate synthase large subunit
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_2005 protoheme IX farnesyltransferase 0.61 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS00115 heme o synthase 0.60 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03516 protoheme IX farnesyltransferase coxE 0.62 CCNA_02994 carbamoyl-phosphate synthase large chain low > 67
Caulobacter crescentus NA1000 0.40 CCNA_03516 protoheme IX farnesyltransferase coxE 0.62 CCNA_02994 carbamoyl-phosphate synthase large chain
Phaeobacter inhibens DSM 17395 0.39 PGA1_c06260 protoheme IX farnesyltransferase CtaB 0.60 PGA1_c24560 carbamoyl-phosphate synthase large chain
Dinoroseobacter shibae DFL-12 0.38 Dshi_1141 protoheme IX farnesyltransferase (RefSeq) 0.60 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.29 49
Pseudomonas stutzeri RCH2 0.30 Psest_4334 protoheme IX farnesyltransferase 0.56 Psest_0968 carbamoyl-phosphate synthase, large subunit
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.4836.1 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.56 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS12895 heme o synthase 0.55 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.29 ABIE51_RS19165 heme o synthase 0.55 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0671 protoheme IX farnesyltransferase 0.55 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Alteromonas macleodii MIT1002 0.28 MIT1002_04027 Protoheme IX farnesyltransferase 0.55 MIT1002_01467 Carbamoyl-phosphate synthase large chain low > 70
Variovorax sp. SCN45 0.28 GFF2307 Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB 0.53 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1862 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone 0.55 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Marinobacter adhaerens HP15 0.28 HP15_3780 protoheme IX farnesyltransferase 0.56 HP15_3077 carbamoyl-phosphate synthase, large subunit
Variovorax sp. OAS795 0.27 ABID97_RS23915 heme o synthase 0.53 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF698 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.52 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_606 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone 0.55 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Mycobacterium tuberculosis H37Rv 0.27 Rv1451 Probable cytochrome C oxidase assembly factor CtaB 0.47 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Shewanella oneidensis MR-1 0.27 SO4614 ctaB protoheme IX farnesyltransferase (NCBI ptt file) 0.55 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS02690 protoheme IX farnesyltransferase 0.55 BPHYT_RS14190 carbamoyl phosphate synthase large subunit low > 109
Pseudomonas sp. RS175 0.27 PFR28_04683 Protoheme IX farnesyltransferase 0.55 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_11200 protoheme IX farnesyltransferase 0.55 AO356_07480 carbamoyl phosphate synthase large subunit low > 104
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_16555 cyoE heme o synthase 0.56 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 52
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4106 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone 0.55 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodanobacter denitrificans MT42 0.26 LRK55_RS06825 heme o synthase 0.56 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS07085 heme o synthase 0.56 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS01545 heme o synthase 0.55 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.26 Ac3H11_3883 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.53 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Shewanella sp. ANA-3 0.26 Shewana3_3998 protoheme IX farnesyltransferase (RefSeq) 0.54 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 73
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS10990 protoheme IX farnesyltransferase 0.56 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum PSI07 0.26 RPSI07_RS22315 protoheme IX farnesyltransferase 0.56 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.26 UW163_RS02590 protoheme IX farnesyltransferase 0.56 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_01985 protoheme IX farnesyltransferase 0.55 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS06845 heme o synthase 0.56 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.25 RS_RS01830 protoheme IX farnesyltransferase 0.56 RS_RS07630 carbamoyl-phosphate synthase large chain
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS01920 protoheme IX farnesyltransferase 0.55 RR42_RS13510 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_10870 protoheme IX farnesyltransferase 0.55 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas sp. S08-1 0.25 OH686_12285 protoheme IX farnesyltransferase 0.55 OH686_17080 Carbamoyl-phosphate synthase large chain
Paraburkholderia graminis OAS925 0.25 ABIE53_000683 protoheme IX farnesyltransferase 0.55 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS20745 protoheme IX farnesyltransferase 0.54 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.24 PFLU_RS00330 protoheme IX farnesyltransferase 0.55 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS00330 protoheme IX farnesyltransferase 0.55 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Shewanella loihica PV-4 0.24 Shew_0117 protoheme IX farnesyltransferase (RefSeq) 0.55 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 60
Pseudomonas simiae WCS417 0.24 PS417_00340 protoheme IX farnesyltransferase 0.55 PS417_24040 carbamoyl phosphate synthase large subunit
Castellaniella sp019104865 MT123 0.23 ABCV34_RS13230 heme o synthase 0.56 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Shewanella amazonensis SB2B 0.23 Sama_3491 protoheme IX farnesyltransferase (RefSeq) 0.55 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 62
Pseudomonas putida KT2440 0.23 PP_0110 CyoE like protoheme IX farnesyltransferase 0.55 PP_4723 Carbamoyl-phosphate synthase large chain low > 96
Magnetospirillum magneticum AMB-1 0.21 AMB_RS03800 protoheme IX farnesyltransferase 1 0.65 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_2105 protoheme IX farnesyltransferase 0.38 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Rahnella sp. WP5 0.18 EX31_RS22200 protoheme IX farnesyltransferase 0.54 EX31_RS03830 carbamoyl-phosphate synthase large subunit low > 89
Klebsiella michiganensis M5al 0.17 BWI76_RS06475 protoheme IX farnesyltransferase 0.55 BWI76_RS04470 carbamoyl phosphate synthase large subunit low > 92
Erwinia tracheiphila SCR3 0.17 LU632_RS18395 cyoE heme o synthase 0.54 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit
Enterobacter sp. TBS_079 0.17 MPMX20_01019 Protoheme IX farnesyltransferase 0.55 MPMX20_00740 Carbamoyl-phosphate synthase large chain low > 85
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2543 protoheme IX farnesyltransferase 0.55 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.55 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Serratia liquefaciens MT49 0.17 IAI46_04965 protoheme IX farnesyltransferase 0.54 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 86
Dickeya dianthicola 67-19 0.16 HGI48_RS05640 protoheme IX farnesyltransferase 0.54 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Escherichia coli ECRC98 0.16 JDDGAC_12035 cyoE heme o synthase 0.55 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit
Escherichia fergusonii Becca 0.16 EFB2_03629 Protoheme IX farnesyltransferase 0.55 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECRC101 0.16 OKFHMN_08380 cyoE heme o synthase 0.55 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit
Dickeya dianthicola ME23 0.16 DZA65_RS05965 protoheme IX farnesyltransferase 0.54 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECOR38 0.16 HEPCGN_06995 cyoE heme o synthase 0.55 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit low > 85
Escherichia coli ECRC99 0.16 KEDOAH_19585 cyoE heme o synthase 0.55 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC62 0.16 BNILDI_22730 cyoE heme o synthase 0.55 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.55 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 73
Escherichia coli ECRC102 0.16 NIAGMN_06435 cyoE heme o synthase 0.55 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli Nissle 1917 0.16 ECOLIN_RS02575 heme o synthase 0.55 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit low > 52
Escherichia coli BW25113 0.16 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.55 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) low > 76
Escherichia coli ECRC101 0.16 MCAODC_27605 cyoE heme o synthase 0.55 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit
Escherichia coli BL21 0.16 ECD_00379 protoheme IX farnesyltransferase 0.55 ECD_00037 carbamoyl-phosphate synthase large subunit low > 60
Escherichia coli ECOR27 0.16 NOLOHH_01315 cyoE heme o synthase 0.55 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 57
Dickeya dadantii 3937 0.16 DDA3937_RS05595 protoheme IX farnesyltransferase 0.55 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_1145 Protoheme IX farnesyltransferase 0.55 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_1145 Protoheme IX farnesyltransferase 0.55 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pectobacterium carotovorum WPP14 0.16 HER17_RS15895 heme o synthase 0.54 HER17_RS02900 carbamoyl-phosphate synthase large subunit low > 75
Pantoea sp. MT58 0.15 IAI47_14700 protoheme IX farnesyltransferase 0.55 IAI47_16115 carbamoyl-phosphate synthase large subunit low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.15 CA265_RS17805 protoheme IX farnesyltransferase 0.37 CA265_RS20080 carbamoyl phosphate synthase large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS03670 heme o synthase 0.39 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit

Not shown: 0 genomes with orthologs for SMc00450 only; 18 genomes with orthologs for SMc01215 only