Conservation of cofitness between RR42_RS00615 and RR42_RS06485 in Cupriavidus basilensis FW507-4G11

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS00615 recombinase XerC 1.0 RR42_RS06485 chorismate synthase 0.42 7
Ralstonia solanacearum PSI07 0.55 RPSI07_RS23690 tyrosine recombinase XerC 0.84 RPSI07_RS15640 chorismate synthase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS00260 Tyrosine recombinase XerC 1 0.83 RS_RS07885 chorismate synthase low > 80
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS05065 tyrosine recombinase XerC 0.86 ABZR87_RS13790 chorismate synthase low > 80
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS09675 tyrosine recombinase XerC 0.84 RALBFv3_RS01850 chorismate synthase — —
Ralstonia solanacearum UW163 0.52 UW163_RS03905 tyrosine recombinase XerC 0.84 UW163_RS15160 chorismate synthase — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS00355 tyrosine recombinase XerC 0.86 QEN71_RS05215 chorismate synthase — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS01655 tyrosine recombinase XerC 0.86 BPHYT_RS13705 chorismate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_02202 integrase/recombinase XerC 0.87 H281DRAFT_04489 chorismate synthase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_000426 integrase/recombinase XerC 0.87 ABIE53_002916 chorismate synthase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS21475 recombinase XerC 0.79 HSERO_RS16525 chorismate synthase — —
Dechlorosoma suillum PS 0.40 Dsui_0651 tyrosine recombinase XerC 0.74 Dsui_3204 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1995 Tyrosine recombinase XerC 0.74 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF547 Tyrosine recombinase XerC 0.76 GFF5239 Chorismate synthase (EC 4.2.3.5) low > 90
Castellaniella sp019104865 MT123 0.37 ABCV34_RS13455 tyrosine recombinase XerC 0.72 ABCV34_RS04300 chorismate synthase — —
Variovorax sp. SCN45 0.36 GFF4490 Site-specific tyrosine recombinase XerC 0.69 GFF2627 Chorismate synthase (EC 4.2.3.5) low > 127
Variovorax sp. OAS795 0.36 ABID97_RS06150 tyrosine recombinase XerC 0.70 ABID97_RS19805 chorismate synthase — —
Pseudomonas sp. S08-1 0.34 OH686_13785 tyrosine recombinase XerC 0.64 OH686_00675 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09050 recombinase XerC 0.63 AO353_02250 chorismate synthase low > 101
Pseudomonas stutzeri RCH2 0.33 Psest_3767 tyrosine recombinase XerC 0.63 Psest_1903 chorismate synthase — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_842 Tyrosine recombinase XerC 0.63 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) low > 87
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_12725 recombinase XerC 0.63 AO356_19540 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0185 tyrosine recombinase XerC subunit 0.63 Psyr_1853 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4416 Tyrosine recombinase XerC 0.63 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0185 tyrosine recombinase XerC subunit 0.63 Psyr_1853 chorismate synthase — —
Pseudomonas sp. RS175 0.32 PFR28_04378 Tyrosine recombinase XerC 0.62 PFR28_03126 Chorismate synthase — —
Pseudomonas putida KT2440 0.32 PP_5230 Tyrosine recombinase XerC 0.64 PP_1830 Chorismate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2171 Tyrosine recombinase XerC 0.63 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS15025 tyrosine recombinase XerC 0.67 ABZR86_RS08040 chorismate synthase low > 74
Pantoea sp. MT58 0.32 IAI47_18400 tyrosine recombinase XerC 0.60 IAI47_06150 chorismate synthase — —
Serratia liquefaciens MT49 0.32 IAI46_00725 tyrosine recombinase XerC 0.61 IAI46_18025 chorismate synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF239 Tyrosine recombinase XerC 0.61 GFF1950 Chorismate synthase (EC 4.2.3.5) — —
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_15325 xerC tyrosine recombinase XerC 0.65 OKGIIK_04805 aroC chorismate synthase — —
Klebsiella michiganensis M5al 0.31 BWI76_RS01210 tyrosine recombinase XerC 0.59 BWI76_RS20435 chorismate synthase 0.24 79
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.65 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) — —
Rahnella sp. WP5 0.31 EX31_RS15165 tyrosine recombinase XerC 0.60 EX31_RS19685 chorismate synthase — —
Lysobacter sp. OAE881 0.31 ABIE51_RS03035 tyrosine recombinase XerC 0.63 ABIE51_RS08220 chorismate synthase — —
Escherichia coli ECRC102 0.31 NIAGMN_12175 xerC tyrosine recombinase XerC 0.61 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli ECRC100 0.31 OKFHMN_14420 xerC tyrosine recombinase XerC 0.61 OKFHMN_22615 aroC chorismate synthase low > 80
Dickeya dadantii 3937 0.31 DDA3937_RS19890 tyrosine recombinase XerC 0.60 DDA3937_RS14580 chorismate synthase — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS08300 tyrosine recombinase XerC 0.64 LRK55_RS01505 chorismate synthase low > 63
Escherichia coli ECRC98 0.31 JDDGAC_18045 xerC tyrosine recombinase XerC 0.61 JDDGAC_26575 aroC chorismate synthase — —
Escherichia coli ECRC101 0.31 MCAODC_04925 xerC tyrosine recombinase XerC 0.61 MCAODC_13655 aroC chorismate synthase — —
Escherichia coli ECRC99 0.31 KEDOAH_13730 xerC tyrosine recombinase XerC 0.61 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli BW25113 0.31 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.61 b2329 aroC chorismate synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.31 EFB2_04826 Tyrosine recombinase XerC 0.61 EFB2_01529 Chorismate synthase low > 86
Escherichia coli ECOR27 0.31 NOLOHH_06550 xerC tyrosine recombinase XerC 0.61 NOLOHH_14250 aroC chorismate synthase low > 75
Escherichia coli ECOR38 0.31 HEPCGN_13125 xerC tyrosine recombinase XerC 0.61 HEPCGN_21820 aroC chorismate synthase low > 87
Enterobacter asburiae PDN3 0.31 EX28DRAFT_4480 tyrosine recombinase XerC 0.59 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_04239 Tyrosine recombinase XerC 0.61 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli BL21 0.31 ECD_03687 site-specific tyrosine recombinase 0.61 ECD_02254 chorismate synthase 0.39 33
Escherichia coli Nissle 1917 0.31 ECOLIN_RS21875 tyrosine recombinase XerC 0.61 ECOLIN_RS13490 chorismate synthase — —
Shewanella loihica PV-4 0.31 Shew_0325 tyrosine recombinase XerC (RefSeq) 0.61 Shew_2416 chorismate synthase (RefSeq) low > 60
Escherichia coli ECRC62 0.31 BNILDI_04985 xerC tyrosine recombinase XerC 0.61 BNILDI_13170 aroC chorismate synthase low > 75
Dickeya dianthicola 67-19 0.31 HGI48_RS20045 tyrosine recombinase XerC 0.61 HGI48_RS14530 chorismate synthase — —
Marinobacter adhaerens HP15 0.31 HP15_250 site-specific tyrosine recombinase XerC 0.69 HP15_1838 chorismate synthase — —
Dickeya dianthicola ME23 0.30 DZA65_RS21090 tyrosine recombinase XerC 0.61 DZA65_RS15465 chorismate synthase — —
Shewanella sp. ANA-3 0.30 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.61 Shewana3_1469 chorismate synthase (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.30 HER17_RS01350 tyrosine recombinase XerC 0.62 HER17_RS06935 chorismate synthase low > 75
Shewanella amazonensis SB2B 0.30 Sama_3247 integrase/recombinase XerC (RefSeq) 0.64 Sama_2159 chorismate synthase (RefSeq) — —
Enterobacter sp. TBS_079 0.30 MPMX20_04465 Tyrosine recombinase XerC 0.59 MPMX20_03264 Chorismate synthase low > 85
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08535 tyrosine recombinase XerC 0.64 LRK54_RS01725 chorismate synthase — —
Erwinia tracheiphila SCR3 0.29 LU632_RS24135 xerC tyrosine recombinase XerC 0.63 LU632_RS07775 aroC chorismate synthase — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29280 tyrosine recombinase XerC 0.63 PFLU_RS21280 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29280 tyrosine recombinase XerC 0.63 PFLU_RS21280 chorismate synthase — —
Pseudomonas simiae WCS417 0.29 PS417_27595 recombinase XerC 0.63 PS417_19315 chorismate synthase — —
Alteromonas macleodii MIT1002 0.28 MIT1002_00157 Tyrosine recombinase XerC 0.65 MIT1002_01229 Chorismate synthase — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.47 B158DRAFT_2433 chorismate synthase (EC 4.2.3.5) low > 40
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_00650 tyrosine recombinase XerC 0.63 CSW01_10560 chorismate synthase low > 62
Bacteroides ovatus ATCC 8483 0.23 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein 0.38 BACOVA_03296 chorismate synthase low > 94
Rhodospirillum rubrum S1H 0.22 Rru_A1220 Phage integrase (NCBI) 0.55 Rru_A2623 Chorismate synthase (NCBI) — —
Bifidobacterium breve UCC2003 0.22 BBR_RS16655 tyrosine recombinase XerC 0.20 BBR_RS15080 chorismate synthase low > 34
Dinoroseobacter shibae DFL-12 0.22 Dshi_5002 xerC hypothetical protein (NCBI) 0.53 Dshi_3275 Chorismate synthase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.22 TX73_000945 tyrosine recombinase XerC 0.53 TX73_006170 chorismate synthase — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS03965 tyrosine recombinase XerC 0.59 AZOBR_RS10730 chorismate synthase — —
Rhizobium sp. OAE497 0.21 ABIE40_RS17950 tyrosine recombinase XerC 0.49 ABIE40_RS03980 chorismate synthase — —
Magnetospirillum magneticum AMB-1 0.21 AMB_RS21485 tyrosine recombinase XerC 0.55 AMB_RS08025 chorismate synthase — —
Azospirillum sp. SherDot2 0.21 MPMX19_02110 Tyrosine recombinase XerC 0.56 MPMX19_01810 Chorismate synthase — —
Bosea sp. OAE506 0.21 ABIE41_RS07870 tyrosine recombinase XerC 0.52 ABIE41_RS10190 chorismate synthase — —
Phaeobacter inhibens DSM 17395 0.21 PGA1_c05760 putative tyrosine recombinase XerC 0.53 PGA1_c34060 chorismate synthase AroC — —
Sinorhizobium meliloti 1021 0.20 SMc02489 site-specific tyrosine recombinase XerC 0.49 SMc00007 chorismate synthase — —
Agrobacterium fabrum C58 0.20 Atu2628 site-specific recombinase 0.47 Atu0754 chorismate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS12210 tyrosine recombinase XerC 0.50 A4249_RS08790 chorismate synthase — —
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_2764 Site-specific recombinase XerD 0.47 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) — —

Not shown: 1 genomes with orthologs for RR42_RS00615 only; 19 genomes with orthologs for RR42_RS06485 only