Conservation of cofitness between PP_0366 and PP_4984 in Pseudomonas putida KT2440

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0366 dethiobiotin synthetase 1.0 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.92 2
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.90 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.98 1
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.89 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.90 3
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_14155 dethiobiotin synthetase 0.89 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.92 2
Pseudomonas fluorescens SBW25 0.77 PFLU_RS27630 dethiobiotin synthase 0.89 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.90 1
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.89 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.93 2
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS27630 dethiobiotin synthase 0.89 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.90 1
Pseudomonas sp. RS175 0.77 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 0.89 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase — —
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_07505 dethiobiotin synthetase 0.90 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.97 3
Pseudomonas simiae WCS417 0.76 PS417_25985 dethiobiotin synthetase 0.89 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.67 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_4683 dethiobiotin synthase 0.91 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.72 2
Pseudomonas sp. S08-1 0.72 OH686_10335 dethiobiotin synthase 0.84 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.97 1
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_4683 dethiobiotin synthase 0.91 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.82 3
Pseudomonas stutzeri RCH2 0.62 Psest_0415 dethiobiotin synthase 0.85 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.87 2
Shewanella loihica PV-4 0.53 Shew_1722 dethiobiotin synthase (RefSeq) 0.29 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Shewanella sp. ANA-3 0.51 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) 0.28 Shewana3_2520 aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.51 SO2737 bioD dethiobiotin synthase (NCBI ptt file) 0.29 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.49 HP15_2482 dethiobiotin synthetase 0.68 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.45 50
Pantoea sp. MT58 0.47 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD 0.30 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 2
Dickeya dianthicola ME23 0.47 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD 0.31 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.67 2
Dickeya dianthicola 67-19 0.47 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD 0.31 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 71
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS12700 dethiobiotin synthase 0.57 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2213 dethiobiotin synthase 0.32 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.68 29
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_05660 dethiobiotin synthase 0.31 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 62
Dickeya dadantii 3937 0.45 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD 0.32 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 40
Serratia liquefaciens MT49 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD 0.33 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Enterobacter sp. TBS_079 0.45 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 0.32 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.30 4
Escherichia fergusonii Becca 0.44 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 0.31 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS04145 dethiobiotin synthase 0.31 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Klebsiella michiganensis M5al 0.44 BWI76_RS08775 dethiobiotin synthase 0.32 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 7
Escherichia coli ECRC98 0.44 JDDGAC_10020 bioD dethiobiotin synthase 0.31 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 0.31 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 73
Escherichia coli BL21 0.44 ECD_00745 dethiobiotin synthetase 0.31 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent low > 60
Escherichia coli ECRC101 0.44 MCAODC_25600 bioD dethiobiotin synthase 0.31 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC99 0.44 KEDOAH_21525 bioD dethiobiotin synthase 0.31 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli BW25113 0.44 b0778 bioD dethiobiotin synthetase (NCBI) 0.31 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.42 3
Escherichia coli ECOR27 0.44 NOLOHH_22755 bioD dethiobiotin synthase 0.31 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 57
Pectobacterium carotovorum WPP14 0.44 HER17_RS13445 dethiobiotin synthase 0.32 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.64 17
Escherichia coli ECRC102 0.44 NIAGMN_04430 bioD dethiobiotin synthase 0.31 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC101 0.44 OKFHMN_06385 bioD dethiobiotin synthase 0.31 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECOR38 0.43 HEPCGN_01655 bioD dethiobiotin synthase 0.31 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 85
Escherichia coli ECRC62 0.43 BNILDI_21025 bioD dethiobiotin synthase 0.31 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Dechlorosoma suillum PS 0.43 Dsui_2884 dethiobiotin synthase 0.47 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.89 3
Erwinia tracheiphila SCR3 0.43 LU632_RS09145 bioD dethiobiotin synthase 0.32 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Lysobacter sp. OAE881 0.42 ABIE51_RS17990 dethiobiotin synthase 0.47 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) 0.48 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) — —
Shewanella amazonensis SB2B 0.42 Sama_1441 bioD dithiobiotin synthetase (RefSeq) 0.26 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) 0.32 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 78
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_16455 bioD dethiobiotin synthase 0.56 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 52
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS07180 dethiobiotin synthase 0.56 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 59
Rahnella sp. WP5 0.41 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD 0.33 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 6
Rhodanobacter denitrificans MT42 0.41 LRK55_RS06915 dethiobiotin synthase 0.56 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 63
Alteromonas macleodii MIT1002 0.40 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 0.32 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.96 6
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0869 dethiobiotin synthase 0.64 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS12255 dethiobiotin synthetase 0.45 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase 0.37 2
Variovorax sp. OAS795 0.37 ABID97_RS16255 dethiobiotin synthase 0.44 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS02155 dithiobiotin synthetase 0.48 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.50 2
Variovorax sp. SCN45 0.36 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) 0.45 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 127
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) 0.46 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 79
Ralstonia solanacearum UW163 0.35 UW163_RS14160 dethiobiotin synthase 0.45 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS00825 dethiobiotin synthase 0.45 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02096 dethiobiotin synthetase 0.47 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.84 1
Paraburkholderia graminis OAS925 0.34 ABIE53_000578 dethiobiotin synthetase 0.49 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.89 3
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12345 dethiobiotin synthase 0.46 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.54 1
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.49 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.87 1
Ralstonia solanacearum PSI07 0.33 RPSI07_RS16695 dethiobiotin synthase 0.46 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 81
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS01090 dethiobiotin synthase 0.47 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Ralstonia solanacearum GMI1000 0.32 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD 0.45 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS00935 dethiobiotin synthetase 0.41 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS15275 dethiobiotin synthase 0.30 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.95 3
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_1009 dethiobiotin synthase (RefSeq) 0.41 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.28 15
Rhizobium sp. OAE497 0.15 ABIE40_RS21065 dethiobiotin synthase 0.29 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 107
Synechococcus elongatus PCC 7942 0.15 Synpcc7942_0030 bioD dethiobiotin synthase 0.33 Synpcc7942_0031 bioA aminotransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS09760 dethiobiotin synthase 0.38 CA265_RS07530 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 88
Castellaniella sp019104865 MT123 0.14 ABCV34_RS15285 dethiobiotin synthase 0.28 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 48
Agrobacterium fabrum C58 0.14 Atu3999 dithiobiotin synthetase 0.31 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.80 1
Phaeobacter inhibens DSM 17395 0.13 PGA1_c09140 dethiobiotin synthetase BioD 0.29 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.57 2
Methanococcus maripaludis S2 0.13 MMP_RS08095 dethiobiotin synthase 0.30 MMP_RS04500 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.98 1
Methanococcus maripaludis JJ 0.13 MMJJ_RS06270 dethiobiotin synthase 0.30 MMJJ_RS00645 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.97 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_02415 dethiobiotin synthase 0.34 CA264_02410 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74

Not shown: 3 genomes with orthologs for PP_0366 only; 13 genomes with orthologs for PP_4984 only