Conservation of cofitness between Psest_0697 and Psest_0969 in Pseudomonas stutzeri RCH2

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0697 ribosomal protein L9 1.0 Psest_0969 transcription elongation factor GreA 0.31 14
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_139 LSU ribosomal protein L9p 0.78 PfGW456L13_5098 Transcription elongation factor GreA — —
Pseudomonas sp. S08-1 0.80 OH686_15935 ribosomal protein L9 0.85 OH686_17085 Transcription elongation factor GreA low > 80
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_0584 LSU ribosomal protein L9P 0.81 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_0584 LSU ribosomal protein L9P 0.81 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_08585 50S ribosomal protein L9 0.80 AO356_07475 transcription elongation factor GreA — —
Pseudomonas sp. RS175 0.77 PFR28_05135 50S ribosomal protein L9 0.82 PFR28_00078 Transcription elongation factor GreA — —
Pseudomonas putida KT2440 0.77 PP_4874 50S ribosomal protein L9 0.78 PP_4722 Transcription elongation factor GreA low > 96
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_1398 LSU ribosomal protein L9p 0.78 Pf1N1B4_1171 Transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_3602 LSU ribosomal protein L9p 0.79 Pf6N2E2_3363 Transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_13225 50S ribosomal protein L9 0.80 AO353_05625 transcription elongation factor GreA low > 101
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS02650 50S ribosomal protein L9 0.78 PFLU_RS25875 transcription elongation factor GreA — —
Pseudomonas fluorescens SBW25 0.70 PFLU_RS02650 50S ribosomal protein L9 0.78 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas simiae WCS417 0.70 PS417_02580 50S ribosomal protein L9 0.78 PS417_24035 transcription elongation factor GreA — —
Marinobacter adhaerens HP15 0.67 HP15_628 50S ribosomal protein L9 0.63 HP15_3076 protein containing prokaryotic transcription elongation factor GreA domain — —
Alteromonas macleodii MIT1002 0.66 MIT1002_03816 50S ribosomal protein L9 0.67 MIT1002_01468 Transcript cleavage factor GreA low > 70
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_2004 LSU ribosomal protein L9P 0.65 B158DRAFT_0617 transcription elongation factor GreA low > 40
Acinetobacter radioresistens SK82 0.65 MPMX26_01155 50S ribosomal protein L9 0.64 MPMX26_00765 Transcription elongation factor GreA low > 36
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_01940 50S ribosomal protein L9 0.57 CSW01_03330 transcription elongation factor GreA — —
Dickeya dadantii 3937 0.63 DDA3937_RS17215 50S ribosomal protein L9 0.65 DDA3937_RS03015 transcription elongation factor GreA — —
Serratia liquefaciens MT49 0.63 IAI46_01715 50S ribosomal protein L9 0.62 IAI46_01880 transcription elongation factor GreA — —
Rahnella sp. WP5 0.63 EX31_RS08745 50S ribosomal protein L9 0.62 EX31_RS08595 transcription elongation factor GreA low > 89
Dickeya dianthicola ME23 0.63 DZA65_RS18360 50S ribosomal protein L9 0.64 DZA65_RS03180 transcription elongation factor GreA — —
Escherichia coli ECRC102 0.63 NIAGMN_09950 rplI 50S ribosomal protein L9 0.64 NIAGMN_15805 greA transcription elongation factor GreA — —
Escherichia coli ECRC101 0.63 OKFHMN_12100 rplI 50S ribosomal protein L9 0.64 OKFHMN_18045 greA transcription elongation factor GreA — —
Escherichia coli ECRC98 0.63 JDDGAC_15740 rplI 50S ribosomal protein L9 0.64 JDDGAC_21670 greA transcription elongation factor GreA — —
Escherichia coli ECRC99 0.63 KEDOAH_16055 rplI 50S ribosomal protein L9 0.64 KEDOAH_10105 greA transcription elongation factor GreA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03839 50S ribosomal protein L9 0.64 OHPLBJKB_00519 Transcription elongation factor GreA — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS24390 50S ribosomal protein L9 0.64 ECOLIN_RS18320 transcription elongation factor GreA — —
Escherichia coli ECOR38 0.63 HEPCGN_10330 rplI 50S ribosomal protein L9 0.64 HEPCGN_16920 greA transcription elongation factor GreA — —
Escherichia coli BW25113 0.63 b4203 rplI 50S ribosomal protein L9 (NCBI) 0.64 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.50 2
Escherichia coli ECOR27 0.63 NOLOHH_04360 rplI 50S ribosomal protein L9 0.64 NOLOHH_09845 greA transcription elongation factor GreA — —
Escherichia coli BL21 0.63 ECD_04070 50S ribosomal subunit protein L9 0.64 ECD_03046 transcript cleavage factor low > 60
Pantoea sp. MT58 0.63 IAI47_02675 50S ribosomal protein L9 0.63 IAI47_17080 transcription elongation factor GreA — —
Escherichia fergusonii Becca 0.63 EFB2_04332 50S ribosomal protein L9 0.64 EFB2_00642 Transcription elongation factor GreA low > 86
Escherichia coli ECRC101 0.63 MCAODC_02615 rplI 50S ribosomal protein L9 0.64 MCAODC_08565 greA transcription elongation factor GreA — —
Dickeya dianthicola 67-19 0.63 HGI48_RS17270 50S ribosomal protein L9 0.64 HGI48_RS03185 transcription elongation factor GreA — —
Escherichia coli ECRC62 0.63 BNILDI_07125 rplI 50S ribosomal protein L9 0.64 BNILDI_01690 greA transcription elongation factor GreA — —
Shewanella loihica PV-4 0.62 Shew_3281 rplI 50S ribosomal protein L9 (RefSeq) 0.64 Shew_2837 transcription elongation factor GreA (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF857 LSU ribosomal protein L9p 0.64 GFF2922 Transcription elongation factor GreA — —
Pectobacterium carotovorum WPP14 0.60 HER17_RS03905 50S ribosomal protein L9 0.67 HER17_RS18330 transcription elongation factor GreA — —
Enterobacter sp. TBS_079 0.60 MPMX20_00480 50S ribosomal protein L9 0.64 MPMX20_04085 Transcription elongation factor GreA low > 85
Erwinia tracheiphila SCR3 0.59 LU632_RS21710 rplI 50S ribosomal protein L9 0.58 LU632_RS21165 greA transcription elongation factor GreA low > 74
Shewanella oneidensis MR-1 0.58 SO3927 rplI ribosomal protein L9 (NCBI ptt file) 0.66 SO1191 greA transcription elongation factor GreA (NCBI ptt file) — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.3313.1 LSU ribosomal protein L9p 0.57 Xcc-8004.2911.1 Transcription elongation factor GreA low > 74
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS08860 50S ribosomal protein L9 0.47 ABZR86_RS05595 transcription elongation factor GreA low > 74
Dechlorosoma suillum PS 0.57 Dsui_1992 ribosomal protein L9 0.57 Dsui_3063 transcription elongation factor GreA low > 51
Shewanella amazonensis SB2B 0.55 Sama_3061 rplI 50S ribosomal protein L9 (RefSeq) 0.64 Sama_0951 GreA/GreB family elongation factor (RefSeq) — —
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3388 ribosomal protein L9 0.64 EX28DRAFT_3232 transcription elongation factor GreA — —
Shewanella sp. ANA-3 0.54 Shewana3_0704 rplI 50S ribosomal protein L9 (RefSeq) 0.67 Shewana3_1017 transcription elongation factor GreA (RefSeq) — —
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS02535 50S ribosomal protein L9 0.49 LRK54_RS18005 transcription elongation factor GreA low > 59
Rhodanobacter denitrificans MT42 0.54 LRK55_RS02290 50S ribosomal protein L9 0.49 LRK55_RS17860 transcription elongation factor GreA low > 63
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_09590 rplI 50S ribosomal protein L9 0.49 OKGIIK_07290 greA transcription elongation factor GreA low > 52
Lysobacter sp. OAE881 0.53 ABIE51_RS09230 50S ribosomal protein L9 0.59 ABIE51_RS11610 transcription elongation factor GreA low > 62
Klebsiella michiganensis M5al 0.52 BWI76_RS02675 50S ribosomal protein L9 0.64 BWI76_RS25160 transcription elongation factor GreA — —
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS22490 50S ribosomal protein L9 0.58 QEN71_RS04785 transcription elongation factor GreA 0.71 152
Ralstonia solanacearum GMI1000 0.50 RS_RS06570 50S ribosomal protein L9 0.56 RS_RS07635 transcription elongation factor GreA — —
Ralstonia solanacearum UW163 0.49 UW163_RS13235 50S ribosomal protein L9 0.55 UW163_RS15495 transcription elongation factor GreA — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS15790 50S ribosomal protein L9 0.55 RALBFv3_RS02185 transcription elongation factor GreA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3928 LSU ribosomal protein L9p 0.55 GFF4897 Transcription elongation factor GreA low > 90
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS11360 50S ribosomal protein L9 0.57 ABZR87_RS14135 transcription elongation factor GreA — —
Castellaniella sp019104865 MT123 0.48 ABCV34_RS02260 50S ribosomal protein L9 0.57 ABCV34_RS15540 transcription elongation factor GreA — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS12590 50S ribosomal protein L9 0.54 RR42_RS13505 transcription elongation factor GreA — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS17575 50S ribosomal protein L9 0.56 RPSI07_RS15260 transcription elongation factor GreA — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS10385 50S ribosomal protein L9 0.60 HSERO_RS06930 transcription elongation factor GreA — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS08870 50S ribosomal protein L9 0.57 BPHYT_RS14185 transcription elongation factor GreA — —
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_00792 LSU ribosomal protein L9P 0.56 H281DRAFT_04404 GreA/GreB family elongation factor — —
Paraburkholderia graminis OAS925 0.44 ABIE53_002008 large subunit ribosomal protein L9 0.56 ABIE53_003003 transcription elongation factor GreA — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1514 LSU ribosomal protein L9p 0.55 Ac3H11_437 Transcription elongation factor GreA low > 79
Variovorax sp. OAS795 0.43 ABID97_RS10840 50S ribosomal protein L9 0.54 ABID97_RS17070 transcription elongation factor GreA low > 91
Variovorax sp. SCN45 0.42 GFF2813 LSU ribosomal protein L9p 0.53 GFF374 Transcription elongation factor GreA low > 127
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU0958 rplI ribosomal protein L9 (TIGR) 0.49 DVU3245 greA transcription elongation factor GreA (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_1352 rplI 50S ribosomal protein L9 (RefSeq) 0.47 DvMF_0383 greA transcription elongation factor GreA (RefSeq) — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03185 ribosomal protein L9 0.40 BACOVA_01643 prokaryotic transcription elongation factor, GreA/GreB domain protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_2386 ribosomal protein L9 0.40 Echvi_0180 transcription elongation factor GreA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS05035 50S ribosomal protein L9 0.41 ABZR88_RS00130 transcription elongation factor GreA — —
Bacteroides thetaiotaomicron VPI-5482 0.31 BT2161 50S ribosomal protein L9 (NCBI ptt file) 0.40 BT2565 transcription elongation factor greA (NCBI ptt file) — —
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS02395 50S ribosomal protein L9 0.39 CA265_RS23190 transcription elongation factor GreA — —
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS07635 50S ribosomal protein L9 0.39 HMPREF1058_RS12565 transcription elongation factor GreA — —
Phocaeicola dorei CL03T12C01 0.29 ABI39_RS00060 50S ribosomal protein L9 0.40 ABI39_RS04145 transcription elongation factor GreA — —
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS10755 50S ribosomal protein L9 0.42 HMPREF1078_RS17725 transcription elongation factor GreA low > 61
Bifidobacterium breve UCC2003 0.28 BBR_RS11595 50S ribosomal protein L9 0.21 BBR_RS14165 transcription elongation factor GreA — —
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS08725 50S ribosomal protein L9 0.40 HMPREF1181_RS00805 transcription elongation factor GreA — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_01265 50S ribosomal protein L9 0.38 CA264_03870 transcription elongation factor GreA low > 74

Not shown: 3 genomes with orthologs for Psest_0697 only; 14 genomes with orthologs for Psest_0969 only