Conservation of cofitness between GFF4099 and GFF4290 in Hydrogenophaga sp. GW460-11-11-14-LB1

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4099 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 1.0 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.65 7
Acidovorax sp. GW101-3H11 0.92 Ac3H11_941 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.90 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Variovorax sp. OAS795 0.91 ABID97_RS17550 fumarate hydratase 0.88 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.31 21
Variovorax sp. SCN45 0.91 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.87 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) low > 127
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS07760 fumarate hydratase 0.69 HSERO_RS15565 sulfate adenylyltransferase subunit 2
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS13905 fumarate hydratase 0.64 RR42_RS16255 sulfate adenylyltransferase low > 128
Ralstonia solanacearum PSI07 0.78 RPSI07_RS14865 fumarate hydratase 0.64 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD low > 81
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_04956 fumarase, class I, homodimeric 0.64 H281DRAFT_00117 sulfate adenylyltransferase subunit 2
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS06985 fumarate hydratase 0.64 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 low > 109
Paraburkholderia graminis OAS925 0.77 ABIE53_001662 fumarate hydratase class I 0.63 ABIE53_001229 sulfate adenylyltransferase subunit 2 low > 113
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS14375 fumarate hydratase 0.64 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD low > 80
Ralstonia solanacearum GMI1000 0.77 RS_RS09830 fumarate hydratase 0.64 RS_RS12155 sulfate adenylyltransferase subunit CysD low > 80
Ralstonia solanacearum UW163 0.76 UW163_RS11265 fumarate hydratase 0.64 UW163_RS09085 sulfate adenylyltransferase subunit CysD
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS02460 fumarate hydratase 0.64 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS23780 fumarate hydratase 0.64 QEN71_RS25240 sulfate adenylyltransferase subunit CysD low > 153
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS19555 fumarate hydratase 0.39 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD low > 74
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_02115 ttdA fumarate hydratase 0.39 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD low > 52
Rhodanobacter denitrificans MT42 0.73 LRK55_RS12360 fumarate hydratase 0.38 LRK55_RS05290 sulfate adenylyltransferase subunit CysD
Lysobacter sp. OAE881 0.73 ABIE51_RS12620 fumarate hydratase 0.43 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD low > 62
Castellaniella sp019104865 MT123 0.73 ABCV34_RS09450 fumarate hydratase 0.65 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD low > 48
Rhodanobacter denitrificans FW104-10B01 0.73 LRK54_RS12620 fumarate hydratase 0.38 LRK54_RS05520 sulfate adenylyltransferase subunit CysD low > 59
Dechlorosoma suillum PS 0.72 Dsui_2001 hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily 0.61 Dsui_1983 sulfate adenylyltransferase, small subunit
Xanthomonas campestris pv. campestris strain 8004 0.72 Xcc-8004.3506.1 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.38 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Pseudomonas simiae WCS417 0.72 PS417_22635 fumarate hydratase 0.39 PS417_03715 sulfate adenylyltransferase subunit 2
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS24270 fumarate hydratase 0.39 PFLU_RS03765 sulfate adenylyltransferase subunit CysD
Pseudomonas fluorescens SBW25 0.71 PFLU_RS24270 fumarate hydratase 0.39 PFLU_RS03765 sulfate adenylyltransferase subunit CysD
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_4031 fumarase 0.38 Psyr_4128 sulfate adenylyltransferase subunit 2
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_4031 fumarase 0.38 Psyr_4128 sulfate adenylyltransferase subunit 2
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1808 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.39 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_683 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.39 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_03795 fumarate hydratase 0.39 AO353_05080 sulfate adenylyltransferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5489 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.39 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Pseudomonas sp. RS175 0.71 PFR28_03458 Fumarate hydratase class I, aerobic 0.39 PFR28_00193 Sulfate adenylyltransferase subunit 2
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_17810 fumarate hydratase 0.39 AO356_16665 sulfate adenylyltransferase
Pseudomonas stutzeri RCH2 0.71 Psest_3193 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 0.38 Psest_3294 sulfate adenylyltransferase, small subunit
Pseudomonas putida KT2440 0.71 PP_0897 Fumarate hydratase, class I 0.39 PP_1303 Sulfate adenylyltransferase subunit 2
Pseudomonas sp. S08-1 0.70 OH686_18780 Fumarate hydratase class I, aerobic 0.39 OH686_08450 Sulfate adenylyltransferase subunit 2
Acinetobacter radioresistens SK82 0.68 MPMX26_00411 Fumarate hydratase class I, aerobic 0.41 MPMX26_02326 Sulfate adenylyltransferase subunit 2 low > 36
Shewanella loihica PV-4 0.67 Shew_1904 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq) 0.41 Shew_1422 sulfate adenylyltransferase subunit 2 (RefSeq)
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_1342 fumarase, class I, homodimeric (EC 4.2.1.2) 0.41 B158DRAFT_2360 sulfate adenylyltransferase, small subunit
Marinobacter adhaerens HP15 0.67 HP15_1143 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit 0.42 HP15_2462 sulfate adenylyltransferase, small subunit
Sphingomonas koreensis DSMZ 15582 0.67 Ga0059261_3334 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 0.37 Ga0059261_4042 sulfate adenylyltransferase, small subunit low > 68
Shewanella amazonensis SB2B 0.66 Sama_1688 fumarate hydratase, class I, anaerobic, putative (RefSeq) 0.40 Sama_2891 sulfate adenylyltransferase subunit 2 (RefSeq)
Shewanella oneidensis MR-1 0.66 SO2222 fumarate hydratase, class I, anaerobic, putative (NCBI ptt file) 0.40 SO3727 cysD sulfate adenylyltransferase, subunit 2 (NCBI ptt file)
Alteromonas macleodii MIT1002 0.65 MIT1002_02009 Fumarate hydratase class I, anaerobic 0.43 MIT1002_01274 Sulfate adenylyltransferase subunit 2
Shewanella sp. ANA-3 0.65 Shewana3_2302 fumarase (RefSeq) 0.40 Shewana3_0863 sulfate adenylyltransferase subunit 2 (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06585 fumarate hydratase 0.40 CSW01_12960 sulfate adenylyltransferase subunit CysD low > 62
Rhodopseudomonas palustris CGA009 0.21 TX73_020085 fumarate hydratase 0.28 TX73_003885 sulfate adenylyltransferase subunit 2 low > 86
Enterobacter asburiae PDN3 0.20 EX28DRAFT_1609 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 0.40 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit low > 76
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09000 class I fumarate hydratase 0.39 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD low > 52
Escherichia coli ECOR38 0.20 HEPCGN_06020 fumB class I fumarate hydratase 0.39 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD low > 85
Escherichia coli ECOR27 0.20 NOLOHH_18150 fumB class I fumarate hydratase 0.40 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD low > 57
Magnetospirillum magneticum AMB-1 0.20 AMB_RS06760 fumarate hydratase 0.28 AMB_RS11195 sulfate adenylyltransferase subunit 2
Escherichia coli BL21 0.20 ECD_01581 fumarate hydratase (fumarase A), aerobic Class I 0.39 ECD_02602 sulfate adenylyltransferase, subunit 2 low > 60
Escherichia fergusonii Becca 0.20 EFB2_02380 Fumarate hydratase class I, aerobic 0.40 EFB2_01158 Sulfate adenylyltransferase subunit 2 low > 86
Escherichia coli ECRC101 0.20 OKFHMN_12525 fumB class I fumarate hydratase 0.40 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD
Enterobacter sp. TBS_079 0.20 MPMX20_02021 Fumarate hydratase class I, aerobic 0.40 MPMX20_03638 Sulfate adenylyltransferase subunit 2 low > 85
Escherichia coli ECRC62 0.20 BNILDI_16940 fumB class I fumarate hydratase 0.40 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD
Escherichia coli BW25113 0.20 b1612 fumA fumarate hydratase (fumarase A), aerobic Class I (NCBI) 0.39 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) low > 76
Escherichia coli ECRC102 0.20 NIAGMN_10370 fumB class I fumarate hydratase 0.40 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD
Rhizobium sp. OAE497 0.20 ABIE40_RS10550 fumarate hydratase 0.37 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD low > 107
Escherichia coli ECRC99 0.20 KEDOAH_15640 fumB class I fumarate hydratase 0.40 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03922 Fumarate hydratase class I, anaerobic 0.40 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 low > 73
Escherichia coli ECRC98 0.20 JDDGAC_16160 fumB class I fumarate hydratase 0.40 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD
Escherichia coli ECRC101 0.20 MCAODC_03035 fumB class I fumarate hydratase 0.40 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD
Rhodospirillum rubrum S1H 0.19 Rru_A2206 tartrate dehydrogenase (NCBI) 0.40 Rru_A2289 Sulfate adenylyltransferase, small subunit (NCBI)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF1477 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) 0.39 GFF4800 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) low > 78
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2256 fumarate hydratase class I, anaerobic (NCBI ptt file) 0.42 BT0414 sulfate adenylyltransferase subunit 2 (NCBI ptt file)
Serratia liquefaciens MT49 0.19 IAI46_21370 fumarate hydratase 0.40 IAI46_03715 sulfate adenylyltransferase subunit CysD low > 86
Klebsiella michiganensis M5al 0.19 BWI76_RS08450 fumarate hydratase 0.40 BWI76_RS22700 sulfate adenylyltransferase subunit 2 low > 92
Azospirillum brasilense Sp245 0.19 AZOBR_RS10315 fumarate hydratase 0.39 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 low > 97
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS17710 fumarate hydratase 0.42 HMPREF1078_RS01705 sulfate adenylyltransferase subunit CysD
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS09470 fumarate hydratase 0.42 HMPREF1181_RS04305 sulfate adenylyltransferase subunit CysD
Rahnella sp. WP5 0.19 EX31_RS01160 fumarate hydratase 0.40 EX31_RS07880 sulfate adenylyltransferase subunit CysD low > 89
Erwinia tracheiphila SCR3 0.19 LU632_RS01205 class I fumarate hydratase FumA 0.39 LU632_RS06425 cysD sulfate adenylyltransferase subunit CysD low > 74
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03087 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 0.43 BACOVA_01768 putative sulfate adenylyltransferase subunit 2
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS13805 fumarate hydratase 0.42 HMPREF1058_RS02945 sulfate adenylyltransferase subunit CysD
Azospirillum sp. SherDot2 0.19 MPMX19_03166 Fumarate hydratase class I, aerobic 0.39 MPMX19_06719 Sulfate adenylyltransferase subunit 2
Dickeya dadantii 3937 0.19 DDA3937_RS04540 fumarate hydratase 0.40 DDA3937_RS16925 sulfate adenylyltransferase subunit CysD low > 74
Dickeya dianthicola ME23 0.19 DZA65_RS04420 fumarate hydratase 0.40 DZA65_RS18070 sulfate adenylyltransferase subunit CysD low > 75
Pectobacterium carotovorum WPP14 0.18 HER17_RS17120 fumarate hydratase 0.39 HER17_RS04285 sulfate adenylyltransferase subunit CysD low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS04500 fumarate hydratase 0.40 HGI48_RS16995 sulfate adenylyltransferase subunit CysD low > 71
Pantoea sp. MT58 0.18 IAI47_20435 fumarate hydratase 0.40 IAI47_04180 sulfate adenylyltransferase subunit CysD low > 76
Bosea sp. OAE506 0.18 ABIE41_RS00110 fumarate hydratase 0.38 ABIE41_RS15370 sulfate adenylyltransferase subunit CysD low > 77

Not shown: 1 genomes with orthologs for GFF4099 only; 11 genomes with orthologs for GFF4290 only