Conservation of cofitness between Psest_2285 and Psest_3637 in Pseudomonas stutzeri RCH2

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2285 ATP-dependent protease La 1.0 Psest_3637 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.30 11
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I 0.70 PfGW456L13_1235 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 87
Pseudomonas sp. RS175 0.91 PFR28_01230 Lon protease 0.70 PFR28_04031 Anhydro-N-acetylmuramic acid kinase low > 88
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_01740 DNA-binding protein 0.68 AO356_14500 anhydro-N-acetylmuramic acid kinase 0.33 82
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I 0.67 Pf6N2E2_4838 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_20185 DNA-binding protein 0.70 AO353_07145 anhydro-N-acetylmuramic acid kinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I 0.68 Pf1N1B4_2562 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) — —
Pseudomonas simiae WCS417 0.90 PS417_17225 DNA-binding protein 0.68 PS417_25650 anhydro-N-acetylmuramic acid kinase — —
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS19160 endopeptidase La 0.69 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase low > 109
Pseudomonas sp. S08-1 0.90 OH686_03635 endopeptidase La 0.70 OH686_15205 Anhydro-N-acetylmuramic acid kinase low > 80
Pseudomonas fluorescens SBW25 0.90 PFLU_RS19160 endopeptidase La 0.69 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.68 Psyr_4567 Protein of unknown function UPF0075 0.37 52
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.68 Psyr_4567 Protein of unknown function UPF0075 low > 86
Pseudomonas putida KT2440 0.88 PP_2302 DNA-binding, ATP-dependent protease 0.67 PP_0434 Anhydro-N-acetylmuramic acid kinase low > 96
Marinobacter adhaerens HP15 0.71 HP15_2183 DNA-binding ATP-dependent protease La 0.40 HP15_356 anhydro-N-acetylmuramic acid kinase low > 73
Shewanella loihica PV-4 0.70 Shew_2506 ATP-dependent protease La (RefSeq) 0.46 Shew_1020 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) — —
Shewanella sp. ANA-3 0.70 Shewana3_2659 Lon-A peptidase (RefSeq) 0.46 Shewana3_3060 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) — —
Shewanella oneidensis MR-1 0.70 SO1796 lon ATP-dependent protease La (NCBI ptt file) 0.46 SO1313 conserved hypothetical protein (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS05650 endopeptidase La 0.43 DDA3937_RS12585 anhydro-N-acetylmuramic acid kinase low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS05695 endopeptidase La 0.43 HGI48_RS12640 anhydro-N-acetylmuramic acid kinase low > 71
Klebsiella michiganensis M5al 0.69 BWI76_RS06535 endopeptidase La 0.40 BWI76_RS16420 anhydro-N-acetylmuramic acid kinase low > 92
Dickeya dianthicola ME23 0.69 DZA65_RS06020 endopeptidase La 0.43 DZA65_RS13095 anhydro-N-acetylmuramic acid kinase low > 75
Serratia liquefaciens MT49 0.69 IAI46_05020 endopeptidase La 0.42 IAI46_11350 anhydro-N-acetylmuramic acid kinase low > 86
Pectobacterium carotovorum WPP14 0.69 HER17_RS15840 endopeptidase La 0.44 HER17_RS09280 anhydro-N-acetylmuramic acid kinase — —
Rahnella sp. WP5 0.69 EX31_RS22255 endopeptidase La 0.44 EX31_RS13765 anhydro-N-acetylmuramic acid kinase low > 89
Shewanella amazonensis SB2B 0.69 Sama_1226 endopeptidase La (RefSeq) 0.48 Sama_0848 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) low > 62
Enterobacter sp. TBS_079 0.68 MPMX20_01030 Lon protease 0.43 MPMX20_01998 Anhydro-N-acetylmuramic acid kinase low > 85
Erwinia tracheiphila SCR3 0.68 LU632_RS18335 lon endopeptidase La 0.44 LU632_RS11250 anmK anhydro-N-acetylmuramic acid kinase — —
Enterobacter asburiae PDN3 0.68 EX28DRAFT_2531 endopeptidase La 0.44 EX28DRAFT_1636 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.51 43
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4355 ATP-dependent protease La (EC 3.4.21.53) Type I 0.42 GFF3634 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 78
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_09605 endopeptidase La 0.41 CSW01_03615 anhydro-N-acetylmuramic acid kinase low > 62
Escherichia coli BL21 0.68 ECD_00391 DNA-binding ATP-dependent protease La 0.41 ECD_01610 anhydro-N-acetylmuramic acid kinase low > 60
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02635 endopeptidase La 0.41 ECOLIN_RS09150 anhydro-N-acetylmuramic acid kinase — —
Escherichia coli BW25113 0.68 b0439 lon DNA-binding ATP-dependent protease La (NCBI) 0.41 b1640 ydhH anhydro-N-acetylmuramic acid kinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03234 Lon protease 0.41 OHPLBJKB_02085 Anhydro-N-acetylmuramic acid kinase low > 73
Escherichia coli ECRC62 0.68 BNILDI_22670 lon_P403L Lon protease 0.41 BNILDI_16795 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia coli ECOR38 0.68 HEPCGN_06935 lon_P403L Lon protease 0.41 HEPCGN_05870 anmK anhydro-N-acetylmuramic acid kinase low > 85
Escherichia coli ECOR27 0.68 NOLOHH_01255 lon_P403L Lon protease 0.41 NOLOHH_18005 anmK anhydro-N-acetylmuramic acid kinase — —
Alteromonas macleodii MIT1002 0.68 MIT1002_02757 Lon protease 0.42 MIT1002_03153 Anhydro-N-acetylmuramic acid kinase low > 70
Pantoea sp. MT58 0.68 IAI47_14645 endopeptidase La 0.44 IAI47_10710 anhydro-N-acetylmuramic acid kinase — —
Escherichia coli ECRC99 0.68 KEDOAH_19645 Lon protease 0.41 KEDOAH_00620 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia coli ECRC101 0.68 OKFHMN_08320 Lon protease 0.41 OKFHMN_27485 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia fergusonii Becca 0.68 EFB2_03618 Lon protease 0.41 EFB2_02352 Anhydro-N-acetylmuramic acid kinase low > 86
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS12785 endopeptidase La 0.43 ABZR87_RS07595 anhydro-N-acetylmuramic acid kinase low > 80
Escherichia coli ECRC102 0.68 NIAGMN_06375 Lon protease 0.41 NIAGMN_00580 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia coli ECRC98 0.68 JDDGAC_11975 Lon protease 0.41 JDDGAC_02075 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia coli ECRC101 0.68 MCAODC_27545 Lon protease 0.41 MCAODC_17925 anmK anhydro-N-acetylmuramic acid kinase — —
Ralstonia solanacearum UW163 0.67 UW163_RS14650 endopeptidase La 0.43 UW163_RS01950 anhydro-N-acetylmuramic acid kinase — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01340 endopeptidase La 0.43 RALBFv3_RS11635 anhydro-N-acetylmuramic acid kinase — —
Ralstonia solanacearum GMI1000 0.67 RS_RS08655 endopeptidase La 0.44 RS_RS02460 anhydro-N-acetylmuramic acid kinase — —
Ralstonia solanacearum PSI07 0.67 RPSI07_RS16135 endopeptidase La 0.43 RPSI07_RS21585 anhydro-N-acetylmuramic acid kinase — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS21975 endopeptidase La 0.43 QEN71_RS26820 anhydro-N-acetylmuramic acid kinase low > 153
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_1038 ATP-dependent protease La 0.44 B158DRAFT_0004 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases low > 40
Lysobacter sp. OAE881 0.66 ABIE51_RS14145 endopeptidase La 0.38 ABIE51_RS00040 anhydro-N-acetylmuramic acid kinase low > 62
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_08030 lon endopeptidase La 0.41 OKGIIK_15705 anhydro-N-acetylmuramic acid kinase low > 52
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS07320 endopeptidase La 0.44 ABZR86_RS15665 anhydro-N-acetylmuramic acid kinase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 0.47 H281DRAFT_04259 anhydro-N-acetylmuramic acid kinase — —
Rhodanobacter denitrificans MT42 0.66 LRK55_RS16460 endopeptidase La 0.41 LRK55_RS08740 anhydro-N-acetylmuramic acid kinase low > 63
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS16735 endopeptidase La 0.41 LRK54_RS09210 anhydro-N-acetylmuramic acid kinase low > 59
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS09460 peptidase 0.47 BPHYT_RS16645 anhydro-N-acetylmuramic acid kinase — —
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS09030 DNA-binding protein 0.46 RR42_RS02660 anhydro-N-acetylmuramic acid kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I 0.42 Xcc-8004.4878.1 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 74
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS12905 peptidase 0.47 HSERO_RS02010 anhydro-N-acetylmuramic acid kinase — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I 0.47 Ac3H11_3055 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 79
Castellaniella sp019104865 MT123 0.65 ABCV34_RS05125 endopeptidase La 0.40 ABCV34_RS10575 anhydro-N-acetylmuramic acid kinase — —
Paraburkholderia graminis OAS925 0.64 ABIE53_002117 ATP-dependent Lon protease 0.47 ABIE53_003499 anhydro-N-acetylmuramic acid kinase low > 113
Variovorax sp. OAS795 0.64 ABID97_RS17590 endopeptidase La 0.45 ABID97_RS24970 anhydro-N-acetylmuramic acid kinase low > 91
Azospirillum brasilense Sp245 0.63 AZOBR_RS07145 peptidase 0.25 AZOBR_RS05815 anhydro-N-acetylmuramic acid kinase low > 97
Azospirillum sp. SherDot2 0.63 MPMX19_01545 Lon protease 0.22 MPMX19_01987 Anhydro-N-acetylmuramic acid kinase low > 112
Variovorax sp. SCN45 0.63 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.43 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) low > 127
Magnetospirillum magneticum AMB-1 0.63 AMB_RS14035 endopeptidase La 0.22 AMB_RS15285 anhydro-N-acetylmuramic acid kinase low > 64
Rhodospirillum rubrum S1H 0.62 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) 0.26 Rru_A2031 Protein of unknown function UPF0075 (NCBI) low > 58
Caulobacter crescentus NA1000 0.61 CCNA_02037 ATP-dependent endopeptidase Lon 0.23 CCNA_01945 anhydro-N-acetylmuramic acid kinase low > 66
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02037 ATP-dependent endopeptidase Lon 0.23 CCNA_01945 anhydro-N-acetylmuramic acid kinase — —
Rhodopseudomonas palustris CGA009 0.61 TX73_015345 endopeptidase La 0.26 TX73_012725 anhydro-N-acetylmuramic acid kinase — —
Rhizobium sp. OAE497 0.61 ABIE40_RS07100 endopeptidase La 0.22 ABIE40_RS10025 anhydro-N-acetylmuramic acid kinase — —
Sinorhizobium meliloti 1021 0.61 SMc01905 ATP-dependent protease LA protein 0.23 SMc00527 anhydro-N-acetylmuramic acid kinase — —
Agrobacterium fabrum C58 0.60 Atu1261 ATP-dependent protease LA 0.23 Atu1827 hypothetical protein — —
Phaeobacter inhibens DSM 17395 0.59 PGA1_c20540 ATP-dependent protease La 0.19 PGA1_c11350 anhydro-N-acetylmuramic acid kinase AnmK — —
Bosea sp. OAE506 0.59 ABIE41_RS18050 endopeptidase La 0.21 ABIE41_RS00035 anhydro-N-acetylmuramic acid kinase — —
Dinoroseobacter shibae DFL-12 0.59 Dshi_1777 ATP-dependent protease La (RefSeq) 0.19 Dshi_2150 protein of unknown function UPF0075 (RefSeq) low > 64
Acinetobacter radioresistens SK82 0.55 MPMX26_02299 Lon protease 0.44 MPMX26_00013 Anhydro-N-acetylmuramic acid kinase low > 36
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS15670 endopeptidase La 0.26 ABZR88_RS18185 anhydro-N-acetylmuramic acid kinase low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS14555 endopeptidase La 0.27 CA265_RS21930 anhydro-N-acetylmuramic acid kinase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_00045 endopeptidase La 0.28 CA264_03445 anhydro-N-acetylmuramic acid kinase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_4670 ATP-dependent protease La 0.21 Echvi_0859 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases low > 79

Not shown: 12 genomes with orthologs for Psest_2285 only; 1 genomes with orthologs for Psest_3637 only