Conservation of cofitness between Psest_3936 and Psest_0296 in Pseudomonas stutzeri RCH2

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3936 ATP-dependent protease HslVU, peptidase subunit 1.0 Psest_0296 glutathione synthetase, prokaryotic 0.30 6
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS01965 ATP-dependent protease subunit HslV 0.79 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas simiae WCS417 0.87 PS417_01920 ATP-dependent protease subunit HslV 0.79 PS417_26675 glutathione synthetase
Pseudomonas fluorescens SBW25 0.87 PFLU_RS01965 ATP-dependent protease subunit HslV 0.79 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_12430 ATP-dependent protease subunit HslV 0.79 AO353_08110 glutathione synthetase
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1552 ATP-dependent protease HslV (EC 3.4.25.-) 0.76 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3)
Pseudomonas sp. S08-1 0.86 OH686_10095 ATP-dependent protease HslVU, peptidase subunit 0.81 OH686_10915 glutathione synthase low > 80
Pseudomonas putida KT2440 0.85 PP_5000 peptidase component of the ATP-dependent HslVU protease 0.77 PP_4993 Glutathione synthetase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0395 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B 0.80 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0395 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B 0.80 Psyr_0487 glutathione synthase low > 86
Pseudomonas sp. RS175 0.79 PFR28_04999 ATP-dependent protease subunit HslV 0.77 PFR28_04232 Glutathione synthetase
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_289 ATP-dependent protease HslV (EC 3.4.25.-) 0.76 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3)
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_09455 ATP-dependent protease subunit HslV 0.77 AO356_13475 glutathione synthetase low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3769 ATP-dependent protease HslV (EC 3.4.25.-) 0.77 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3)
Shewanella loihica PV-4 0.77 Shew_0375 ATP-dependent protease peptidase subunit (RefSeq) 0.62 Shew_3225 glutathione synthetase (RefSeq)
Shewanella amazonensis SB2B 0.77 Sama_0441 ATP-dependent protease peptidase subunit (RefSeq) 0.64 Sama_0574 glutathione synthetase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_0748 ATP-dependent protease HslVU, peptidase subunit 0.57 B158DRAFT_0189 glutathione synthase (EC 6.3.2.3)
Erwinia tracheiphila SCR3 0.75 LU632_RS19670 hslV ATP-dependent protease subunit HslV 0.62 LU632_RS05480 gshB glutathione synthase
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_13515 HslU--HslV peptidase proteolytic subunit 0.62 CSW01_02490 glutathione synthetase low > 62
Marinobacter adhaerens HP15 0.74 HP15_466 ATP-dependent protease peptidase subunit 0.61 HP15_3512 glutathione synthetase low > 73
Rahnella sp. WP5 0.74 EX31_RS14240 ATP-dependent protease subunit HslV 0.63 EX31_RS02665 glutathione synthase low > 89
Pantoea sp. MT58 0.74 IAI47_00850 ATP-dependent protease subunit HslV 0.61 IAI47_03615 glutathione synthase low > 76
Dickeya dianthicola 67-19 0.74 HGI48_RS20455 ATP-dependent protease subunit HslV 0.62 HGI48_RS18495 glutathione synthase low > 71
Enterobacter sp. TBS_079 0.74 MPMX20_04537 ATP-dependent protease subunit HslV 0.62 MPMX20_03805 Glutathione synthetase low > 85
Dickeya dianthicola ME23 0.74 DZA65_RS21500 ATP-dependent protease subunit HslV 0.62 DZA65_RS19630 glutathione synthase low > 75
Enterobacter asburiae PDN3 0.74 EX28DRAFT_4405 ATP-dependent protease HslVU, peptidase subunit 0.62 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) low > 76
Serratia liquefaciens MT49 0.73 IAI46_24570 ATP-dependent protease subunit HslV 0.64 IAI46_21390 glutathione synthase low > 86
Klebsiella michiganensis M5al 0.73 BWI76_RS00755 ATP-dependent protease subunit HslV 0.62 BWI76_RS24075 glutathione synthase low > 92
Dickeya dadantii 3937 0.73 DDA3937_RS00920 ATP-dependent protease subunit HslV 0.62 DDA3937_RS18560 glutathione synthase low > 74
Escherichia coli BL21 0.73 ECD_03817 peptidase component of the HslUV protease 0.63 ECD_02777 glutathione synthetase low > 60
Pectobacterium carotovorum WPP14 0.73 HER17_RS00855 ATP-dependent protease subunit HslV 0.62 HER17_RS02635 glutathione synthase 0.56 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_04119 ATP-dependent protease subunit HslV 0.63 OHPLBJKB_00771 Glutathione synthetase low > 73
Escherichia coli Nissle 1917 0.73 ECOLIN_RS22640 ATP-dependent protease subunit HslV 0.63 ECOLIN_RS16395 glutathione synthase
Escherichia coli BW25113 0.73 b3932 hslV ATP-dependent protease peptidase subunit (NCBI) 0.63 b2947 gshB glutathione synthetase (NCBI) low > 76
Escherichia fergusonii Becca 0.73 EFB2_04686 ATP-dependent protease subunit HslV 0.63 EFB2_00955 Glutathione synthetase low > 86
Escherichia coli ECOR27 0.73 NOLOHH_05880 hslV ATP-dependent protease subunit HslV 0.63 NOLOHH_11145 gshB glutathione synthase
Escherichia coli ECRC98 0.73 JDDGAC_17360 hslV ATP-dependent protease subunit HslV 0.63 JDDGAC_22905 gshB glutathione synthase
Escherichia coli ECRC102 0.73 NIAGMN_11490 hslV ATP-dependent protease subunit HslV 0.63 NIAGMN_17040 gshB glutathione synthase
Escherichia coli ECRC99 0.73 KEDOAH_14425 hslV ATP-dependent protease subunit HslV 0.63 KEDOAH_08865 gshB glutathione synthase
Escherichia coli ECRC101 0.73 MCAODC_04235 hslV ATP-dependent protease subunit HslV 0.63 MCAODC_09795 gshB glutathione synthase
Escherichia coli ECRC101 0.73 OKFHMN_13735 hslV ATP-dependent protease subunit HslV 0.63 OKFHMN_19275 gshB glutathione synthase
Escherichia coli ECOR38 0.73 HEPCGN_12380 hslV ATP-dependent protease subunit HslV 0.63 HEPCGN_18580 gshB glutathione synthase low > 85
Escherichia coli ECRC62 0.72 BNILDI_05650 hslV ATP-dependent protease subunit HslV 0.63 BNILDI_09725 gshB glutathione synthase
Shewanella oneidensis MR-1 0.72 SO4162 hslV ATP-dependent protease HslV (NCBI ptt file) 0.62 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.72 Shewana3_3699 ATP-dependent protease peptidase subunit (RefSeq) 0.61 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.69 Ac3H11_2004 ATP-dependent protease HslV (EC 3.4.25.-) 0.47 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) low > 79
Variovorax sp. SCN45 0.69 GFF4484 ATP-dependent protease subunit HslV (EC 3.4.25.2) 0.45 GFF6322 Glutathione synthetase (EC 6.3.2.3) low > 127
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS15035 ATP-dependent protease subunit HslV 0.53 ABZR86_RS10370 glutathione synthase
Alteromonas macleodii MIT1002 0.69 MIT1002_03660 ATP-dependent protease subunit HslV 0.53 MIT1002_03055 Glutathione synthetase low > 70
Variovorax sp. OAS795 0.68 ABID97_RS06180 ATP-dependent protease subunit HslV 0.46 ABID97_RS04630 glutathione synthase low > 91
Dechlorosoma suillum PS 0.66 Dsui_0581 ATP-dependent protease HslVU, peptidase subunit 0.47 Dsui_0746 glutathione synthetase low > 51
Rhodanobacter denitrificans MT42 0.66 LRK55_RS08290 ATP-dependent protease subunit HslV 0.54 LRK55_RS03970 glutathione synthase
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS08525 ATP-dependent protease subunit HslV 0.54 LRK54_RS04200 glutathione synthase
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_15320 hslV ATP-dependent protease subunit HslV 0.54 OKGIIK_11075 gshB glutathione synthase
Castellaniella sp019104865 MT123 0.65 ABCV34_RS13415 ATP-dependent protease subunit HslV 0.45 ABCV34_RS04795 glutathione synthase low > 48
Sphingomonas koreensis DSMZ 15582 0.65 Ga0059261_3341 ATP-dependent protease HslVU, peptidase subunit 0.34 Ga0059261_2757 glutathione synthase (EC 6.3.2.3)
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS01060 peptidase 0.47 RR42_RS01780 glutathione synthetase low > 128
Rhodospirillum rubrum S1H 0.63 Rru_A3599 20S proteasome, A and B subunits (NCBI) 0.39 Rru_A3690 Glutathione synthetase (NCBI)
Sinorhizobium meliloti 1021 0.63 SMc02575 ATP-dependent protease peptidase subunit 0.38 SMc00419 glutathione synthetase 0.40 25
Azospirillum brasilense Sp245 0.63 AZOBR_RS01655 peptidase 0.38 AZOBR_RS02170 glutathione synthetase
Rhodopseudomonas palustris CGA009 0.62 TX73_001600 ATP-dependent protease subunit HslV 0.36 TX73_001670 glutathione synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF552 ATP-dependent protease HslV (EC 3.4.25.-) 0.43 GFF2650 Glutathione synthetase (EC 6.3.2.3) 0.50 10
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS00910 peptidase 0.48 HSERO_RS00435 glutathione synthetase low > 78
Ralstonia solanacearum PSI07 0.60 RPSI07_RS23735 ATP-dependent protease subunit HslV 0.47 RPSI07_RS22450 glutathione synthase low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2314 ATP-dependent protease HslV (EC 3.4.25.-) 0.61 GFF3049 Glutathione synthetase (EC 6.3.2.3) low > 78
Bosea sp. OAE506 0.60 ABIE41_RS04430 ATP-dependent protease subunit HslV 0.33 ABIE41_RS03330 glutathione synthase
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS05115 ATP-dependent protease subunit HslV 0.47 ABZR87_RS06710 glutathione synthase low > 80
Ralstonia solanacearum GMI1000 0.60 RS_RS00215 HslU--HslV peptidase proteolytic subunit 0.47 RS_RS01700 glutathione synthetase low > 80
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS09630 ATP-dependent protease subunit HslV 0.47 RALBFv3_RS10860 glutathione synthase low > 76
Ralstonia solanacearum UW163 0.59 UW163_RS03950 ATP-dependent protease subunit HslV 0.47 UW163_RS02720 glutathione synthase
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS01635 ATP-dependent protease subunit HslV 0.44 BPHYT_RS02560 glutathione synthetase
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_02206 HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B 0.44 H281DRAFT_02010 glutathione synthase low > 103
Paraburkholderia graminis OAS925 0.59 ABIE53_000422 ATP-dependent HslUV protease subunit HslV 0.46 ABIE53_000657 glutathione synthase low > 113
Azospirillum sp. SherDot2 0.59 MPMX19_02548 ATP-dependent protease subunit HslV 0.39 MPMX19_02474 Glutathione synthetase
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS00335 ATP-dependent protease subunit HslV 0.46 QEN71_RS01415 glutathione synthase low > 153
Rhizobium sp. OAE497 0.58 ABIE40_RS19465 ATP-dependent protease subunit HslV 0.35 ABIE40_RS01405 glutathione synthase low > 107
Agrobacterium fabrum C58 0.58 Atu0044 heat shock protein hslV 0.34 Atu0310 glutathione synthetase
Magnetospirillum magneticum AMB-1 0.58 AMB_RS22950 HslU--HslV peptidase proteolytic subunit 0.38 AMB_RS22800 glutathione synthase low > 64
Dinoroseobacter shibae DFL-12 0.58 Dshi_3440 20S proteasome A and B subunits (RefSeq) 0.34 Dshi_2829 glutathione synthetase (RefSeq)
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS12390 ATP-dependent protease subunit HslV 0.37 A4249_RS14140 glutathione synthase
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_03843 ATP-dependent endopeptidase hsl proteolytic subunit HslV 0.39 CCNA_00140 glutathione synthetase
Caulobacter crescentus NA1000 0.57 CCNA_03843 ATP-dependent endopeptidase hsl proteolytic subunit HslV 0.39 CCNA_00140 glutathione synthetase
Lysobacter sp. OAE881 0.56 ABIE51_RS03040 ATP-dependent protease subunit HslV 0.54 ABIE51_RS05210 glutathione synthase
Phaeobacter inhibens DSM 17395 0.53 PGA1_c35260 ATP-dependent protease HslV 0.38 PGA1_c26710 glutathione synthetase GshB
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_04815 ATP-dependent protease subunit HslV 0.19 CA264_17395 glutathione synthetase low > 74

Not shown: 3 genomes with orthologs for Psest_3936 only; 3 genomes with orthologs for Psest_0296 only