Conservation of cofitness between PS417_03830 and PS417_14045 in Pseudomonas simiae WCS417

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03830 protein disaggregation chaperone 1.0 PS417_14045 alkyl hydroperoxide reductase 0.53 6
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 1.00 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 1.00 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_5129 ClpB protein 0.95 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15935 ATP-dependent chaperone ClpB 0.95 AO356_22805 alkyl hydroperoxide reductase 0.36 66
Pseudomonas sp. RS175 0.97 PFR28_03746 Chaperone protein ClpB 0.97 PFR28_02482 Alkyl hydroperoxide reductase C low > 88
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1495 ClpB protein 0.95 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2824 ClpB protein 0.96 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14230 ATP-dependent chaperone ClpB 0.94 AO353_26965 alkyl hydroperoxide reductase low > 101
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.97 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.97 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas putida KT2440 0.93 PP_0625 Chaperone protein ClpB 0.90 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit low > 96
Pseudomonas stutzeri RCH2 0.90 Psest_0711 ATP-dependent chaperone ClpB 0.71 Psest_1133 peroxiredoxin
Pseudomonas sp. S08-1 0.89 OH686_16420 ATP-dependent chaperone protein ClpB 0.70 OH686_18680 peroxiredoxin low > 80
Marinobacter adhaerens HP15 0.75 HP15_529 protein disaggregation chaperone 0.72 HP15_3622 peroxiredoxin low > 73
Lysobacter sp. OAE881 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB 0.82 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C low > 62
Alteromonas macleodii MIT1002 0.71 MIT1002_02677 Heat shock protein F84.1 0.73 MIT1002_01784 Alkyl hydroperoxide reductase subunit C low > 70
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.1382.1 ClpB protein 0.70 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 74
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2535 ATP-dependent chaperone ClpB 0.74 B158DRAFT_0278 peroxiredoxin low > 40
Enterobacter sp. TBS_079 0.70 MPMX20_03461 Chaperone protein ClpB 0.74 MPMX20_01271 Alkyl hydroperoxide reductase C low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4184 ClpB protein 0.75 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 78
Escherichia coli ECRC101 0.70 MCAODC_11795 clpB ATP-dependent chaperone ClpB 0.74 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC62 0.70 BNILDI_11745 clpB ATP-dependent chaperone ClpB 0.74 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC99 0.70 KEDOAH_06955 clpB ATP-dependent chaperone ClpB 0.74 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECOR38 0.70 HEPCGN_20390 clpB ATP-dependent chaperone ClpB 0.74 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C low > 85
Escherichia coli ECRC102 0.70 NIAGMN_19035 clpB ATP-dependent chaperone ClpB 0.74 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli Nissle 1917 0.70 ECOLIN_RS14665 ATP-dependent chaperone ClpB 0.74 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C
Escherichia fergusonii Becca 0.70 EFB2_01298 Chaperone protein ClpB 0.74 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01114 Chaperone protein ClpB 0.74 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 73
Escherichia coli ECRC98 0.70 JDDGAC_24930 clpB ATP-dependent chaperone ClpB 0.74 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC101 0.70 OKFHMN_21265 clpB ATP-dependent chaperone ClpB 0.74 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli BL21 0.70 ECD_02482 protein disaggregation chaperone 0.74 ECD_00574 alkyl hydroperoxide reductase, C22 subunit low > 60
Escherichia coli BW25113 0.70 b2592 clpB protein disaggregation chaperone (NCBI) 0.74 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Pantoea sp. MT58 0.70 IAI47_04435 ATP-dependent chaperone ClpB 0.77 IAI47_06790 alkyl hydroperoxide reductase subunit C low > 76
Escherichia coli ECOR27 0.70 NOLOHH_12940 clpB ATP-dependent chaperone ClpB 0.74 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C low > 57
Shewanella amazonensis SB2B 0.70 Sama_2603 clpB protein (RefSeq) 0.74 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq) low > 62
Shewanella oneidensis MR-1 0.70 SO3577 clpB clpB protein (NCBI ptt file) 0.75 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2693 ATP-dependent chaperone ClpB 0.74 EX28DRAFT_2350 peroxiredoxin low > 76
Klebsiella michiganensis M5al 0.70 BWI76_RS21440 ATP-dependent chaperone ClpB 0.75 BWI76_RS07940 alkyl hydroperoxide reductase subunit C low > 92
Shewanella sp. ANA-3 0.70 Shewana3_3169 ATPase (RefSeq) 0.75 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) low > 73
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_01800 clpB ATP-dependent chaperone ClpB 0.88 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C low > 52
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB 0.85 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C low > 74
Pectobacterium carotovorum WPP14 0.70 HER17_RS05410 ATP-dependent chaperone ClpB 0.75 HER17_RS02545 alkyl hydroperoxide reductase subunit C low > 75
Shewanella loihica PV-4 0.70 Shew_2948 ATPase (RefSeq) 0.75 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.70 LRK55_RS04735 ATP-dependent chaperone ClpB 0.86 LRK55_RS00480 alkyl hydroperoxide reductase subunit C low > 63
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB 0.86 LRK54_RS00705 alkyl hydroperoxide reductase subunit C low > 59
Dickeya dianthicola ME23 0.69 DZA65_RS17320 ATP-dependent chaperone ClpB 0.74 DZA65_RS02565 alkyl hydroperoxide reductase subunit C low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS16225 ATP-dependent chaperone ClpB 0.74 HGI48_RS02460 alkyl hydroperoxide reductase subunit C low > 71
Dickeya dadantii 3937 0.69 DDA3937_RS16100 ATP-dependent chaperone ClpB 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C low > 74
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB 0.79 QEN71_RS13380 alkyl hydroperoxide reductase subunit C low > 153
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB 0.80 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Paraburkholderia graminis OAS925 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB 0.80 ABIE53_005904 peroxiredoxin low > 113
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS08990 protein disaggregation chaperone 0.79 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C
Acinetobacter radioresistens SK82 0.66 MPMX26_01096 Chaperone protein ClpB 0.82 MPMX26_02009 Alkyl hydroperoxide reductase C low > 36
Dechlorosoma suillum PS 0.66 Dsui_2161 ATP-dependent chaperone ClpB 0.67 Dsui_1901 peroxiredoxin low > 51
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB 0.67 RALBFv3_RS22270 peroxiredoxin low > 76
Ralstonia solanacearum UW163 0.65 UW163_RS13360 ATP-dependent chaperone ClpB 0.67 UW163_RS22815 peroxiredoxin
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10545 protein disaggregation chaperone 0.82 HSERO_RS21540 alkyl hydroperoxide reductase subunit C low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3942 ClpB protein 0.68 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 90
Ralstonia solanacearum PSI07 0.64 RPSI07_RS17450 ATP-dependent chaperone ClpB 0.68 RPSI07_RS00930 peroxiredoxin 0.57 42
Ralstonia solanacearum GMI1000 0.64 RS_RS06695 chaperone protein ClpB 0.68 RS_RS18335 peroxiredoxin low > 80
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS12455 protein disaggregation chaperone 0.26 RR42_RS07870 alkyl hydroperoxide reductase low > 128
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS11485 ATP-dependent chaperone ClpB 0.67 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C low > 80
Acidovorax sp. GW101-3H11 0.64 Ac3H11_1474 ClpB protein 0.65 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Variovorax sp. SCN45 0.64 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.68 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Variovorax sp. OAS795 0.64 ABID97_RS10930 ATP-dependent chaperone ClpB 0.68 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Castellaniella sp019104865 MT123 0.62 ABCV34_RS06205 ATP-dependent chaperone ClpB 0.79 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Azospirillum sp. SherDot2 0.60 MPMX19_02442 Chaperone protein ClpB 0.89 MPMX19_05835 Alkyl hydroperoxide reductase C 0.47 61
Azospirillum brasilense Sp245 0.59 AZOBR_RS18950 ATPase AAA 0.87 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C 0.30 20
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1434 ATP-dependent chaperone ClpB 0.78 Ga0059261_0155 peroxiredoxin low > 68
Rhodospirillum rubrum S1H 0.58 Rru_A0753 Chaperone clpB (NCBI) 0.84 Rru_A1418 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI)
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS11010 ATP-dependent chaperone ClpB 0.76 A4249_RS04540 alkyl hydroperoxide reductase subunit C low > 48
Caulobacter crescentus NA1000 0.56 CCNA_00922 ClpB protein 0.76 CCNA_03012 peroxiredoxin 0.74 40
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_00922 ClpB protein 0.76 CCNA_03012 peroxiredoxin
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_0567 ATP-dependent chaperone ClpB (RefSeq) 0.49 DvMF_0219 Peroxiredoxin (RefSeq) low > 51
Bifidobacterium breve UCC2003 0.52 BBR_RS19700 ATP-dependent chaperone ClpB 0.57 BBR_RS10460 peroxiredoxin low > 34
Phocaeicola dorei CL03T12C01 0.52 ABI39_RS18885 ATP-dependent chaperone ClpB 0.67 ABI39_RS03995 peroxiredoxin low > 72
Bacteroides ovatus ATCC 8483 0.52 BACOVA_05393 ATP-dependent chaperone protein ClpB 0.70 BACOVA_02068 peroxiredoxin low > 94
Phocaeicola vulgatus CL09T03C04 0.52 HMPREF1058_RS04980 ATP-dependent chaperone ClpB 0.68 HMPREF1058_RS09540 peroxiredoxin low > 67
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS11960 ATP-dependent chaperone ClpB 0.70 HMPREF1181_RS02155 peroxiredoxin low > 56
Bacteroides thetaiotaomicron VPI-5482 0.52 BT4597 endopeptidase Clp ATP-binding chain B (NCBI ptt file) 0.72 BT2812 alkyl hydroperoxide reductase C22 protein (NCBI ptt file) low > 81
Fusobacterium nucleatum SB010 0.51 HUW76_09935 ATP-dependent chaperone ClpB 0.60 HUW76_10130 peroxiredoxin low > 35
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS00500 ATP-dependent chaperone ClpB 0.72 HMPREF1078_RS04205 alkyl hydroperoxide reductase subunit C low > 61

Not shown: 19 genomes with orthologs for PS417_03830 only; 0 genomes with orthologs for PS417_14045 only