| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF483 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 1.0 | GFF2141 | | GTP-binding and nucleic acid-binding protein YchF | 0.64 | 20 |
| Variovorax sp. OAS795 | 0.97 | ABID97_RS17550 | | fumarate hydratase | 0.97 | ABID97_RS24750 | | redox-regulated ATPase YchF | 0.27 | 68 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.91 | GFF4099 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.87 | GFF630 | | GTP-binding and nucleic acid-binding protein YchF | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.89 | Ac3H11_941 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.80 | Ac3H11_4001 | | GTP-binding and nucleic acid-binding protein YchF | — | — |
| Herbaspirillum seropedicae SmR1 | 0.80 | HSERO_RS07760 | | fumarate hydratase | 0.76 | HSERO_RS20405 | | GTP-binding protein YchF | — | — |
| Ralstonia solanacearum PSI07 | 0.77 | RPSI07_RS14865 | | fumarate hydratase | 0.76 | RPSI07_RS10660 | | redox-regulated ATPase YchF | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.77 | RR42_RS13905 | | fumarate hydratase | 0.77 | RR42_RS18365 | | GTP-binding protein | low | > 128 |
| Paraburkholderia graminis OAS925 | 0.76 | ABIE53_001662 | | fumarate hydratase class I | 0.76 | ABIE53_003650 | | GTP-binding protein YchF | 0.30 | 100 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.76 | H281DRAFT_04956 | | fumarase, class I, homodimeric | 0.77 | H281DRAFT_05705 | | hypothetical protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.76 | ABZR87_RS14375 | | fumarate hydratase | 0.77 | ABZR87_RS02220 | | redox-regulated ATPase YchF | 0.54 | 8 |
| Ralstonia solanacearum IBSBF1503 | 0.76 | RALBFv3_RS02460 | | fumarate hydratase | 0.75 | RALBFv3_RS06570 | | redox-regulated ATPase YchF | low | > 76 |
| Ralstonia solanacearum UW163 | 0.76 | UW163_RS11265 | | fumarate hydratase | 0.75 | UW163_RS07055 | | redox-regulated ATPase YchF | — | — |
| Burkholderia phytofirmans PsJN | 0.76 | BPHYT_RS06985 | | fumarate hydratase | 0.76 | BPHYT_RS17445 | | GTP-binding protein YchF | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.76 | RS_RS09830 | | fumarate hydratase | 0.77 | RS_RS14520 | | redox-regulated ATPase YchF | 0.39 | 27 |
| Paraburkholderia sabiae LMG 24235 | 0.75 | QEN71_RS23780 | | fumarate hydratase | 0.78 | QEN71_RS27600 | | redox-regulated ATPase YchF | low | > 153 |
| Dyella japonica UNC79MFTsu3.2 | 0.73 | ABZR86_RS19555 | | fumarate hydratase | 0.66 | ABZR86_RS22010 | | redox-regulated ATPase YchF | 0.44 | 31 |
| Castellaniella sp019104865 MT123 | 0.72 | ABCV34_RS09450 | | fumarate hydratase | 0.75 | ABCV34_RS09215 | | redox-regulated ATPase YchF | — | — |
| Rhodanobacter denitrificans MT42 | 0.71 | LRK55_RS12360 | | fumarate hydratase | 0.64 | LRK55_RS03425 | | redox-regulated ATPase YchF | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.71 | OKGIIK_02115 | ttdA | fumarate hydratase | 0.64 | OKGIIK_10565 | | Ribosome-binding ATPase YchF | low | > 52 |
| Lysobacter sp. OAE881 | 0.71 | ABIE51_RS12620 | | fumarate hydratase | 0.67 | ABIE51_RS05745 | | redox-regulated ATPase YchF | 0.49 | 15 |
| Rhodanobacter denitrificans FW104-10B01 | 0.71 | LRK54_RS12620 | | fumarate hydratase | 0.64 | LRK54_RS03675 | | redox-regulated ATPase YchF | low | > 59 |
| Pseudomonas putida KT2440 | 0.71 | PP_0897 | | Fumarate hydratase, class I | 0.64 | PP_0719 | | ribosome-associated potassium-dependent informational ATP/GTPase | — | — |
| Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS24270 | | fumarate hydratase | 0.64 | PFLU_RS03610 | | redox-regulated ATPase YchF | — | — |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_3193 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | 0.66 | Psest_1103 | | GTP-binding protein YchF | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS24270 | | fumarate hydratase | 0.64 | PFLU_RS03610 | | redox-regulated ATPase YchF | — | — |
| Pseudomonas simiae WCS417 | 0.70 | PS417_22635 | | fumarate hydratase | 0.64 | PS417_03560 | | GTP-binding protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.70 | PfGW456L13_1808 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.65 | PfGW456L13_1574 | | GTP-binding and nucleic acid-binding protein YchF | — | — |
| Pseudomonas sp. RS175 | 0.70 | PFR28_03458 | | Fumarate hydratase class I, aerobic | 0.65 | PFR28_03664 | | Ribosome-binding ATPase YchF | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.70 | AO353_03795 | | fumarate hydratase | 0.63 | AO353_14740 | | GTP-binding protein | low | > 101 |
| Dechlorosoma suillum PS | 0.70 | Dsui_2001 | | hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily | 0.75 | Dsui_1039 | | GTP-binding protein YchF | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.70 | Psyr_4031 | | fumarase | 0.65 | Psyr_0941 | | Conserved hypothetical protein 92 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.70 | Psyr_4031 | | fumarase | 0.65 | Psyr_0941 | | Conserved hypothetical protein 92 | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.70 | AO356_17810 | | fumarate hydratase | 0.65 | AO356_16450 | | GTP-binding protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.70 | Pf1N1B4_683 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.63 | Pf1N1B4_2912 | | GTP-binding and nucleic acid-binding protein YchF | low | > 87 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.70 | Xcc-8004.3506.1 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | 0.66 | Xcc-8004.4168.1 | | GTP-binding and nucleic acid-binding protein YchF | — | — |
| Pseudomonas sp. S08-1 | 0.70 | OH686_18780 | | Fumarate hydratase class I, aerobic | 0.65 | OH686_07965 | | GTP-binding and nucleic acid-binding protein YchF | — | — |
| Acinetobacter radioresistens SK82 | 0.68 | MPMX26_00411 | | Fumarate hydratase class I, aerobic | 0.66 | MPMX26_01861 | | Ribosome-binding ATPase YchF | low | > 36 |
| Sphingomonas koreensis DSMZ 15582 | 0.68 | Ga0059261_3334 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | 0.51 | Ga0059261_3227 | | GTP-binding protein YchF | 0.43 | 45 |
| Shewanella loihica PV-4 | 0.67 | Shew_1904 | | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq) | 0.66 | Shew_2919 | | translation-associated GTPase (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.67 | Sama_1688 | | fumarate hydratase, class I, anaerobic, putative (RefSeq) | 0.68 | Sama_2571 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | — | — |
| Kangiella aquimarina DSM 16071 | 0.67 | B158DRAFT_1342 | | fumarase, class I, homodimeric (EC 4.2.1.2) | 0.69 | B158DRAFT_2052 | | GTP-binding protein YchF | — | — |
| Shewanella sp. ANA-3 | 0.66 | Shewana3_2302 | | fumarase (RefSeq) | 0.66 | Shewana3_1012 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_02009 | | Fumarate hydratase class I, anaerobic | 0.66 | MIT1002_01504 | | Ribosome-binding ATPase YchF | — | — |
| Shewanella oneidensis MR-1 | 0.66 | SO2222 | | fumarate hydratase, class I, anaerobic, putative (NCBI ptt file) | 0.67 | SO1185 | | conserved hypothetical protein TIGR00092 (NCBI ptt file) | — | — |
| Marinobacter adhaerens HP15 | 0.65 | HP15_1143 | | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit | 0.69 | HP15_704 | | translation-associated GTPase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_06585 | | fumarate hydratase | 0.64 | CSW01_10875 | | redox-regulated ATPase YchF | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.55 | Dshi_1426 | | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (RefSeq) | 0.56 | Dshi_0954 | | GTP-binding protein YchF (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.20 | TX73_020085 | | fumarate hydratase | 0.54 | TX73_022570 | | redox-regulated ATPase YchF | low | > 86 |
| Rhodospirillum rubrum S1H | 0.20 | Rru_A2206 | | tartrate dehydrogenase (NCBI) | 0.52 | Rru_A3748 | | hypothetical protein (NCBI) | — | — |
| Escherichia coli BL21 | 0.19 | ECD_03993 | | anaerobic class I fumarate hydratase (fumarase B) | 0.70 | ECD_01178 | | catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated | — | — |
| Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_1609 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | 0.67 | EX28DRAFT_0821 | | GTP-binding protein YchF | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.19 | BT2256 | | fumarate hydratase class I, anaerobic (NCBI ptt file) | 0.56 | BT3116 | | GTP-binding protein (NCBI ptt file) | — | — |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS10550 | | fumarate hydratase | 0.53 | ABIE40_RS13100 | | redox-regulated ATPase YchF | — | — |
| Magnetospirillum magneticum AMB-1 | 0.19 | AMB_RS06760 | | fumarate hydratase | 0.53 | AMB_RS21985 | | redox-regulated ATPase YchF | — | — |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_12525 | fumB | class I fumarate hydratase | 0.70 | OKFHMN_28410 | ychF | redox-regulated ATPase YchF | — | — |
| Escherichia coli ECRC102 | 0.19 | NIAGMN_10370 | fumB | class I fumarate hydratase | 0.70 | NIAGMN_27825 | ychF | redox-regulated ATPase YchF | — | — |
| Bacteroides ovatus ATCC 8483 | 0.19 | BACOVA_03087 | | hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type | 0.55 | BACOVA_02821 | | GTP-binding protein YchF | — | — |
| Escherichia coli ECRC101 | 0.19 | MCAODC_03035 | fumB | class I fumarate hydratase | 0.70 | MCAODC_21850 | ychF | redox-regulated ATPase YchF | low | > 87 |
| Escherichia coli ECRC99 | 0.19 | KEDOAH_15640 | fumB | class I fumarate hydratase | 0.70 | KEDOAH_25405 | ychF | redox-regulated ATPase YchF | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.19 | OHPLBJKB_03922 | | Fumarate hydratase class I, anaerobic | 0.70 | OHPLBJKB_02484 | | Ribosome-binding ATPase YchF | low | > 73 |
| Escherichia coli ECRC98 | 0.19 | JDDGAC_16160 | fumB | class I fumarate hydratase | 0.70 | JDDGAC_06165 | ychF | redox-regulated ATPase YchF | low | > 86 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_04790 | fumB | class I fumarate hydratase | 0.70 | NOLOHH_20650 | ychF | redox-regulated ATPase YchF | — | — |
| Escherichia coli ECRC62 | 0.19 | BNILDI_06700 | fumB | class I fumarate hydratase | 0.70 | BNILDI_18805 | ychF | redox-regulated ATPase YchF | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.19 | GFF1477 | | Fumarate hydratase class I, anaerobic (EC 4.2.1.2) | 0.70 | GFF2784 | | GTP-binding and nucleic acid-binding protein YchF | low | > 78 |
| Serratia liquefaciens MT49 | 0.19 | IAI46_21370 | | fumarate hydratase | 0.68 | IAI46_10240 | | redox-regulated ATPase YchF | — | — |
| Rahnella sp. WP5 | 0.19 | EX31_RS01160 | | fumarate hydratase | 0.67 | EX31_RS07380 | | redox-regulated ATPase YchF | low | > 89 |
| Escherichia coli BW25113 | 0.19 | b4122 | fumB | anaerobic class I fumarate hydratase (fumarase B) (NCBI) | 0.70 | b1203 | ychF | translation-associated GTPase (NCBI) | — | — |
| Escherichia coli ECOR38 | 0.19 | HEPCGN_11160 | fumB | class I fumarate hydratase | 0.70 | HEPCGN_24875 | ychF | redox-regulated ATPase YchF | low | > 87 |
| Enterobacter sp. TBS_079 | 0.19 | MPMX20_02021 | | Fumarate hydratase class I, aerobic | 0.68 | MPMX20_02645 | | Ribosome-binding ATPase YchF | low | > 85 |
| Escherichia fergusonii Becca | 0.19 | EFB2_04461 | | Fumarate hydratase class I, anaerobic | 0.70 | EFB2_02724 | | Ribosome-binding ATPase YchF | low | > 86 |
| Escherichia coli Nissle 1917 | 0.19 | ECOLIN_RS23850 | | class I fumarate hydratase | 0.70 | ECOLIN_RS07280 | | redox-regulated ATPase YchF | low | > 55 |
| Bacteroides stercoris CC31F | 0.19 | HMPREF1181_RS09470 | | fumarate hydratase | 0.49 | HMPREF1181_RS02000 | | redox-regulated ATPase YchF | — | — |
| Dickeya dadantii 3937 | 0.19 | DDA3937_RS04540 | | fumarate hydratase | 0.69 | DDA3937_RS11035 | | redox-regulated ATPase YchF | low | > 74 |
| Dickeya dianthicola ME23 | 0.19 | DZA65_RS04420 | | fumarate hydratase | 0.69 | DZA65_RS11435 | | redox-regulated ATPase YchF | low | > 75 |
| Azospirillum brasilense Sp245 | 0.19 | AZOBR_RS10315 | | fumarate hydratase | 0.55 | AZOBR_RS30645 | | GTP-binding protein YchF | — | — |
| Azospirillum sp. SherDot2 | 0.19 | MPMX19_03166 | | Fumarate hydratase class I, aerobic | 0.54 | MPMX19_01641 | | Ribosome-binding ATPase YchF | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS13805 | | fumarate hydratase | 0.55 | HMPREF1058_RS11490 | | redox-regulated ATPase YchF | — | — |
| Parabacteroides merdae CL09T00C40 | 0.19 | HMPREF1078_RS17710 | | fumarate hydratase | 0.55 | HMPREF1078_RS06345 | | redox-regulated ATPase YchF | — | — |
| Dickeya dianthicola 67-19 | 0.19 | HGI48_RS04500 | | fumarate hydratase | 0.69 | HGI48_RS10975 | | redox-regulated ATPase YchF | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.19 | LU632_RS01205 | | class I fumarate hydratase FumA | 0.68 | LU632_RS13950 | ychF | redox-regulated ATPase YchF | low | > 74 |
| Klebsiella michiganensis M5al | 0.18 | BWI76_RS08450 | | fumarate hydratase | 0.67 | BWI76_RS17485 | | GTP-binding protein YchF | — | — |
| Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS17120 | | fumarate hydratase | 0.70 | HER17_RS10445 | | redox-regulated ATPase YchF | low | > 75 |
| Pantoea sp. MT58 | 0.18 | IAI47_20435 | | fumarate hydratase | 0.68 | IAI47_11310 | | redox-regulated ATPase YchF | low | > 76 |
| Bosea sp. OAE506 | 0.18 | ABIE41_RS00110 | | fumarate hydratase | 0.54 | ABIE41_RS11295 | | redox-regulated ATPase YchF | — | — |
Not shown: 1 genomes with orthologs for GFF483 only; 17 genomes with orthologs for GFF2141 only