| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_3857 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 1.0 | EX28DRAFT_3729 | | pantoate--beta-alanine ligase | 0.49 | 17 |
| Enterobacter sp. TBS_079 | 0.98 | MPMX20_00127 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.98 | MPMX20_00826 | | Pantothenate synthetase | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF408 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 | 0.85 | GFF92 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | low | > 78 |
| Escherichia coli ECOR38 | 0.95 | HEPCGN_14605 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | HEPCGN_08380 | panC | pantoate--beta-alanine ligase | low | > 87 |
| Escherichia coli BW25113 | 0.95 | b3606 | yibK | predicted rRNA methylase (NCBI) | 0.85 | b0133 | panC | pantoate--beta-alanine ligase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.94 | EFB2_00204 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.84 | EFB2_03911 | | Pantothenate synthetase | low | > 86 |
| Escherichia coli BL21 | 0.94 | ECD_03464 | | tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent | 0.84 | ECD_00132 | | pantothenate synthetase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_00093 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | 0.85 | OHPLBJKB_03528 | | Pantothenate synthetase | low | > 73 |
| Escherichia coli ECRC98 | 0.93 | JDDGAC_19390 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | JDDGAC_14000 | panC | pantoate--beta-alanine ligase | low | > 86 |
| Escherichia coli ECRC102 | 0.93 | NIAGMN_13525 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | NIAGMN_08255 | panC | pantoate--beta-alanine ligase | — | — |
| Escherichia coli ECRC101 | 0.93 | MCAODC_06275 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | MCAODC_00920 | panC | pantoate--beta-alanine ligase | low | > 87 |
| Escherichia coli ECOR27 | 0.93 | NOLOHH_07645 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | NOLOHH_02750 | panC | pantoate--beta-alanine ligase | low | > 75 |
| Escherichia coli ECRC62 | 0.93 | BNILDI_03870 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | BNILDI_08920 | panC | pantoate--beta-alanine ligase | low | > 75 |
| Escherichia coli ECRC100 | 0.93 | OKFHMN_15765 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | OKFHMN_10405 | panC | pantoate--beta-alanine ligase | low | > 80 |
| Escherichia coli ECRC99 | 0.93 | KEDOAH_12385 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.84 | KEDOAH_17750 | panC | pantoate--beta-alanine ligase | — | — |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS27200 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.86 | BWI76_RS04990 | | pantoate--beta-alanine ligase | low | > 92 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_24670 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.77 | IAI46_21245 | | pantoate--beta-alanine ligase | low | > 86 |
| Pantoea sp. MT58 | 0.84 | IAI47_00750 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.74 | IAI47_15660 | | pantoate--beta-alanine ligase | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS21865 | trmL | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.76 | LU632_RS20105 | panC | pantoate--beta-alanine ligase | low | > 74 |
| Rahnella sp. WP5 | 0.84 | EX31_RS14330 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.72 | EX31_RS03285 | | pantoate--beta-alanine ligase | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.72 | MIT1002_00480 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.45 | MIT1002_03695 | | Pantothenate synthetase | — | — |
| Pseudomonas sp. S08-1 | 0.65 | OH686_14675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.51 | OH686_17240 | | pantoate--beta-alanine ligase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_13255 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.43 | OKGIIK_03890 | panC | pantoate--beta-alanine ligase | low | > 52 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_13605 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.57 | CSW01_03130 | | pantoate--beta-alanine ligase | — | — |
| Shewanella oneidensis MR-1 | 0.63 | SO4529 | | RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) | 0.48 | SO0869 | panC | pantoate--beta-alanine ligase (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.63 | Sama_3440 | | RNA methyltransferase TrmH, group 2 (RefSeq) | 0.48 | Sama_0775 | panC | pantoate--beta-alanine ligase (RefSeq) | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.63 | LRK54_RS10645 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.44 | LRK54_RS15120 | | pantoate--beta-alanine ligase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_09750 | | rRNA methylase | 0.49 | AO356_16055 | | pantoate--beta-alanine ligase | — | — |
| Shewanella sp. ANA-3 | 0.63 | Shewana3_3934 | | RNA methyltransferase (RefSeq) | 0.48 | Shewana3_3409 | panC | pantoate--beta-alanine ligase (RefSeq) | — | — |
| Lysobacter sp. OAE881 | 0.63 | ABIE51_RS00285 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.44 | ABIE51_RS08030 | | pantoate--beta-alanine ligase | — | — |
| Pseudomonas putida KT2440 | 0.62 | PP_5052 | | tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent | 0.48 | PP_4700 | | pantothenate synthetase | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.62 | Psest_3934 | | rRNA methylase, putative, group 2 | 0.49 | Psest_0995 | | pantoate--beta-alanine ligase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_1613 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.48 | Pf1N1B4_2853 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | low | > 87 |
| Rhodanobacter denitrificans MT42 | 0.62 | LRK55_RS10285 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.43 | LRK55_RS14835 | | pantoate--beta-alanine ligase | low | > 63 |
| Kangiella aquimarina DSM 16071 | 0.62 | B158DRAFT_0713 | | rRNA methylase, putative, group 2 | 0.45 | B158DRAFT_0062 | | pantoate--beta-alanine ligase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_12135 | | rRNA methylase | 0.48 | AO353_14380 | | pantoate--beta-alanine ligase | low | > 101 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS01475 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.34 | QEN71_RS25065 | | pantoate--beta-alanine ligase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_01998 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | 0.35 | H281DRAFT_00150 | | pantothenate synthetase | — | — |
| Paraburkholderia graminis OAS925 | 0.61 | ABIE53_000669 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | 0.34 | ABIE53_001260 | | pantoate--beta-alanine ligase | — | — |
| Pseudomonas simiae WCS417 | 0.61 | PS417_01625 | | rRNA methylase | 0.46 | PS417_23915 | | pantoate--beta-alanine ligase | — | — |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS02620 | | tRNA methyltransferase | 0.34 | BPHYT_RS04925 | | pantothenate synthetase | — | — |
| Pseudomonas sp. RS175 | 0.61 | PFR28_04942 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | 0.49 | PFR28_03722 | | Pantothenate synthetase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.61 | PfGW456L13_349 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.49 | PfGW456L13_1520 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_3828 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.48 | Pf6N2E2_5152 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.47 | PFLU_RS25755 | | pantoate--beta-alanine ligase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.47 | PFLU_RS25755 | | pantoate--beta-alanine ligase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | 0.52 | Psyr_0827 | | pantothenate synthetase | low | > 86 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS06775 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.37 | ABZR87_RS00030 | | pantoate--beta-alanine ligase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | 0.52 | Psyr_0827 | | pantothenate synthetase | low | > 86 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS01855 | | rRNA methylase | 0.35 | RR42_RS16055 | | pantothenate synthetase | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS02655 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.37 | UW163_RS09235 | | pantoate--beta-alanine ligase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS10925 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.37 | RALBFv3_RS04435 | | pantoate--beta-alanine ligase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.59 | ABZR86_RS13445 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.42 | ABZR86_RS00820 | | pantoate--beta-alanine ligase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.58 | Xcc-8004.277.1 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.41 | Xcc-8004.3051.1 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | — | — |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS01765 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.38 | RS_RS11985 | | pantoate--beta-alanine ligase | — | — |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS22385 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.38 | RPSI07_RS12935 | | pantoate--beta-alanine ligase | — | — |
| Variovorax sp. SCN45 | 0.57 | GFF2293 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.38 | GFF2578 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF684 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.32 | GFF1220 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | — | — |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS20615 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.69 | HGI48_RS16075 | | pantoate--beta-alanine ligase | low | > 71 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS21630 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.72 | DZA65_RS17160 | | pantoate--beta-alanine ligase | low | > 75 |
| Shewanella loihica PV-4 | 0.56 | Shew_3577 | | RNA methyltransferase (RefSeq) | 0.48 | Shew_3134 | | pantoate--beta-alanine ligase (RefSeq) | — | — |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS00755 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.70 | DDA3937_RS15960 | | pantoate--beta-alanine ligase | low | > 74 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS23985 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.38 | ABID97_RS07430 | | pantoate--beta-alanine ligase | low | > 91 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1278 | | putative rRNA methylase SpoU family | 0.37 | Dsui_1470 | | pantoate--beta-alanine ligase | — | — |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_3896 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.33 | Ac3H11_3840 | | Pantoate--beta-alanine ligase (EC 6.3.2.1) | low | > 79 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS20815 | | tRNA methyltransferase | 0.37 | HSERO_RS15520 | | pantoate--beta-alanine ligase | — | — |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS00645 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.71 | HER17_RS05555 | | pantoate--beta-alanine ligase | low | > 75 |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS14245 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.32 | ABCV34_RS14585 | | pantoate--beta-alanine ligase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.48 | Rv3366 | | Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase) | 0.33 | Rv3602c | | Pantoate--beta-alanine ligase PanC (pantothenate synthetase) (pantoate activating enzyme) | — | — |
| Acinetobacter radioresistens SK82 | 0.48 | MPMX26_00707 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.40 | MPMX26_00546 | | Pantothenate synthetase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.40 | DvMF_0834 | | tRNA/rRNA methyltransferase (SpoU) (RefSeq) | 0.38 | DvMF_2942 | panC | pantoate--beta-alanine ligase (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.39 | DVU2238 | | RNA methyltransferase, TrmH family (TIGR) | 0.36 | DVU2448 | panC | pantoate--beta-alanine ligase (TIGR) | low | > 55 |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A0365 | | tRNA/rRNA methyltransferase (SpoU) (NCBI) | 0.38 | Rru_A3320 | | Cytidyltransferase-related (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_05011 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.36 | MPMX19_04465 | | Pantothenate synthetase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS20740 | | tRNA methyltransferase | 0.37 | AZOBR_RS09715 | | pantoate--beta-alanine ligase | low | > 97 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS02555 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.35 | A4249_RS06825 | | pantoate--beta-alanine ligase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_3218 | | Predicted rRNA methylase (SpoU class) | 0.41 | Ga0059261_2453 | | pantoate--beta-alanine ligase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_00504 | | 23S rRNA methyltransferase | 0.38 | CCNA_02247 | | pantoate-beta-alanine ligase | — | — |
| Caulobacter crescentus NA1000 | 0.35 | CCNA_00504 | | 23S rRNA methyltransferase | 0.38 | CCNA_02247 | | pantoate-beta-alanine ligase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_006115 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.40 | TX73_016310 | | pantoate--beta-alanine ligase | — | — |
| Agrobacterium fabrum C58 | 0.33 | Atu2244 | | tRNA/rRNA methyltransferase | 0.38 | Atu3482 | | pantoate--beta-alanine ligase | low | > 89 |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS13160 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.39 | ABIE40_RS09460 | | pantoate--beta-alanine ligase | low | > 107 |
| Magnetospirillum magneticum AMB-1 | 0.31 | AMB_RS20670 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.39 | AMB_RS22115 | | pantoate--beta-alanine ligase | — | — |
| Sinorhizobium meliloti 1021 | 0.30 | SMc00184 | | tRNA/rRNA methyltransferase | 0.40 | SMc01880 | | pantoate--beta-alanine ligase | 0.36 | 69 |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS11180 | | TrmH family RNA methyltransferase | 0.37 | ABIE41_RS14875 | | pantoate--beta-alanine ligase | low | > 77 |
Not shown: 3 genomes with orthologs for EX28DRAFT_3857 only; 13 genomes with orthologs for EX28DRAFT_3729 only