| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03871 | | phosphomethylpyrimidine synthase | 1.0 | ECD_03752 | | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent | low | > 61 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_14785 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | KEDOAH_14030 | hemN | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Escherichia coli ECRC101 | 0.99 | MCAODC_03875 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | MCAODC_04620 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 87 |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_13375 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | OKFHMN_14120 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_11125 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | NIAGMN_11875 | hemN | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_17000 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | JDDGAC_17745 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_05520 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | NOLOHH_06250 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Escherichia coli BW25113 | 0.99 | b3994 | thiC | thiamine biosynthesis protein ThiC (NCBI) | 1.00 | b3867 | hemN | O2-independent coproporphyrinogen III oxidase (VIMSS) | low | > 76 |
| Escherichia coli ECRC62 | 0.99 | BNILDI_06005 | thiC | phosphomethylpyrimidine synthase ThiC | 1.00 | BNILDI_05280 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS23040 | | phosphomethylpyrimidine synthase ThiC | 0.99 | ECOLIN_RS22285 | | oxygen-independent coproporphyrinogen III oxidase | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_04056 | | Phosphomethylpyrimidine synthase | 1.00 | OHPLBJKB_04186 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 73 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_12010 | thiC | phosphomethylpyrimidine synthase ThiC | 0.99 | HEPCGN_12755 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 87 |
| Escherichia fergusonii Becca | 0.99 | EFB2_04617 | | Phosphomethylpyrimidine synthase | 0.99 | EFB2_04750 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Enterobacter sp. TBS_079 | 0.95 | MPMX20_00217 | | Phosphomethylpyrimidine synthase | 0.93 | MPMX20_04598 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.95 | EX28DRAFT_4536 | | phosphomethylpyrimidine synthase | 0.93 | EX28DRAFT_4348 | | oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF4198 | | Thiamin biosynthesis protein ThiC | 0.93 | GFF2219 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.38 | 5 |
| Klebsiella michiganensis M5al | 0.93 | BWI76_RS01555 | | phosphomethylpyrimidine synthase ThiC | 0.90 | BWI76_RS00380 | | oxygen-independent coproporphyrinogen III oxidase | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.87 | HER17_RS20380 | | phosphomethylpyrimidine synthase ThiC | 0.83 | HER17_RS21450 | | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Rahnella sp. WP5 | 0.86 | EX31_RS16815 | | phosphomethylpyrimidine synthase ThiC | 0.79 | EX31_RS15885 | | oxygen-independent coproporphyrinogen III oxidase | low | > 89 |
| Dickeya dianthicola ME23 | 0.85 | DZA65_RS01215 | | phosphomethylpyrimidine synthase ThiC | 0.80 | DZA65_RS22220 | | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Dickeya dadantii 3937 | 0.85 | DDA3937_RS01175 | | phosphomethylpyrimidine synthase ThiC | 0.79 | DDA3937_RS00120 | | oxygen-independent coproporphyrinogen III oxidase | low | > 74 |
| Serratia liquefaciens MT49 | 0.84 | IAI46_01320 | | phosphomethylpyrimidine synthase ThiC | 0.82 | IAI46_24970 | | oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Dickeya dianthicola 67-19 | 0.84 | HGI48_RS01170 | | phosphomethylpyrimidine synthase ThiC | 0.79 | HGI48_RS21245 | | oxygen-independent coproporphyrinogen III oxidase | low | > 71 |
| Pantoea sp. MT58 | 0.84 | IAI47_18085 | | phosphomethylpyrimidine synthase ThiC | 0.76 | IAI47_00445 | | oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.83 | LU632_RS00970 | thiC | phosphomethylpyrimidine synthase ThiC | 0.70 | LU632_RS22115 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 74 |
| Shewanella loihica PV-4 | 0.77 | Shew_2096 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.66 | Shew_3720 | | coproporphyrinogen III oxidase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.77 | Sama_1860 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.66 | Sama_0086 | | coproporphyrinogen III oxidase (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.75 | SO2445 | thiC | thiamin biosynthesis protein ThiC (NCBI ptt file) | 0.67 | SO4730 | hemN | oxygen-independent coproporphyrinogen III oxidase (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.75 | MIT1002_00097 | | Phosphomethylpyrimidine synthase | 0.45 | MIT1002_02323 | | Oxygen-independent coproporphyrinogen-III oxidase | low | > 70 |
| Shewanella sp. ANA-3 | 0.74 | Shewana3_1936 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.66 | Shewana3_4116 | | coproporphyrinogen III oxidase (RefSeq) | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.74 | CSW01_00335 | | phosphomethylpyrimidine synthase | 0.71 | CSW01_00590 | | oxygen-independent coproporphyrinogen III oxidase | low | > 62 |
| Pseudomonas sp. RS175 | 0.72 | PFR28_05091 | | Phosphomethylpyrimidine synthase | 0.49 | PFR28_01080 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 88 |
| Pseudomonas putida KT2440 | 0.71 | PP_4922 | | Phosphomethylpyrimidine synthase | 0.48 | PP_4264 | | oxygen-independent coproporphyrinogen III dehydrogenase | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_187 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.49 | PfGW456L13_4070 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.34 | 27 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_15885 | | phosphomethylpyrimidine synthase | 0.48 | OH686_02235 | | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_3644 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.48 | Pf6N2E2_2321 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.71 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.48 | Psyr_3423 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_08810 | | thiamine biosynthesis protein ThiC | 0.48 | AO356_02480 | | coproporphyrinogen III oxidase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.71 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.48 | Psyr_3423 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.49 | PFLU_RS22385 | | oxygen-independent coproporphyrinogen III oxidase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.49 | PFLU_RS22385 | | oxygen-independent coproporphyrinogen III oxidase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.71 | AO353_13010 | | thiamine biosynthesis protein ThiC | 0.48 | AO353_00655 | | coproporphyrinogen III oxidase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.71 | Pf1N1B4_1447 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.48 | Pf1N1B4_3868 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.71 | PS417_02355 | | thiamine biosynthesis protein ThiC | 0.49 | PS417_20775 | | coproporphyrinogen III oxidase | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_0477 | | thiamine biosynthesis protein ThiC | 0.47 | Psest_2537 | | oxygen-independent coproporphyrinogen III oxidase | low | > 67 |
| Marinobacter adhaerens HP15 | 0.70 | HP15_453 | | thiamine biosynthesis protein thiC | 0.49 | HP15_2953 | | oxygen-independent coproporphyrinogen III oxidase | low | > 73 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.70 | CA264_20435 | | phosphomethylpyrimidine synthase ThiC | 0.32 | CA264_03125 | | oxygen-independent coproporphyrinogen III oxidase | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.70 | ABZR88_RS08840 | | phosphomethylpyrimidine synthase ThiC | 0.31 | ABZR88_RS05615 | | oxygen-independent coproporphyrinogen III oxidase | low | > 71 |
| Herbaspirillum seropedicae SmR1 | 0.69 | HSERO_RS02120 | | phosphomethylpyrimidine synthase ThiC | 0.47 | HSERO_RS16075 | | coproporphyrinogen III oxidase | low | > 78 |
| Dyella japonica UNC79MFTsu3.2 | 0.69 | ABZR86_RS17230 | | phosphomethylpyrimidine synthase ThiC | 0.45 | ABZR86_RS04455 | | oxygen-independent coproporphyrinogen III oxidase | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.69 | Echvi_3567 | | thiamine biosynthesis protein ThiC | 0.30 | Echvi_4019 | | oxygen-independent coproporphyrinogen III oxidase | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.69 | ABCV34_RS10825 | | phosphomethylpyrimidine synthase ThiC | 0.44 | ABCV34_RS06465 | | oxygen-independent coproporphyrinogen III oxidase | low | > 48 |
| Paraburkholderia sabiae LMG 24235 | 0.69 | QEN71_RS05480 | | phosphomethylpyrimidine synthase ThiC | 0.47 | QEN71_RS03200 | | oxygen-independent coproporphyrinogen III oxidase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.69 | H281DRAFT_00395 | | hydroxymethylpyrimidine synthase | 0.45 | H281DRAFT_04040 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 103 |
| Dechlorosoma suillum PS | 0.69 | Dsui_0422 | | thiamine biosynthesis protein ThiC | 0.46 | Dsui_1647 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS13220 | | phosphomethylpyrimidine synthase | 0.47 | BPHYT_RS15490 | | coproporphyrinogen III oxidase | low | > 109 |
| Rhodanobacter sp. FW510-T8 | 0.68 | OKGIIK_16965 | thiC | phosphomethylpyrimidine synthase ThiC | 0.44 | OKGIIK_00800 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 52 |
| Paraburkholderia graminis OAS925 | 0.68 | ABIE53_002857 | | phosphomethylpyrimidine synthase | 0.46 | ABIE53_003264 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 113 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.68 | CA265_RS20165 | | phosphomethylpyrimidine synthase ThiC | 0.31 | CA265_RS01360 | | oxygen-independent coproporphyrinogen III oxidase | low | > 88 |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS04785 | | phosphomethylpyrimidine synthase ThiC | 0.46 | ABZR87_RS03910 | | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Lysobacter sp. OAE881 | 0.68 | ABIE51_RS17515 | | phosphomethylpyrimidine synthase ThiC | 0.45 | ABIE51_RS03875 | | oxygen-independent coproporphyrinogen III oxidase | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS09940 | | phosphomethylpyrimidine synthase ThiC | 0.46 | RALBFv3_RS08600 | | oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS03640 | | phosphomethylpyrimidine synthase ThiC | 0.46 | UW163_RS05010 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS00555 | | phosphomethylpyrimidine synthase | 0.46 | RS_RS16455 | | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.68 | RPSI07_RS23420 | | phosphomethylpyrimidine synthase ThiC | 0.46 | RPSI07_RS08635 | | oxygen-independent coproporphyrinogen III oxidase | low | > 81 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.1066.1 | | hypothetical protein | 0.40 | Xcc-8004.2605.1 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.67 | B158DRAFT_0295 | | hydroxymethylpyrimidine synthase | 0.53 | B158DRAFT_1981 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | low | > 40 |
| Cupriavidus basilensis FW507-4G11 | 0.67 | RR42_RS01290 | | thiamine biosynthesis protein ThiC | 0.44 | RR42_RS20025 | | coproporphyrinogen III oxidase | low | > 128 |
| Magnetospirillum magneticum AMB-1 | 0.65 | AMB_RS01125 | | phosphomethylpyrimidine synthase | 0.33 | AMB_RS13570 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS07940 | | phosphomethylpyrimidine synthase | 0.33 | AZOBR_RS03710 | | coproporphyrinogen III oxidase | low | > 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.64 | GFF166 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.46 | GFF4143 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 90 |
| Phaeobacter inhibens DSM 17395 | 0.64 | PGA1_c09110 | | thiamine biosynthesis protein ThiC | 0.30 | PGA1_c00360 | | oxygen-independent coproporphyrinogen III oxidase HemN | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.64 | Dshi_4080 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.34 | Dshi_0541 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | — | — |
| Caulobacter crescentus NA1000 | 0.63 | CCNA_02109 | | thiamine biosynthesis protein thiC | 0.27 | CCNA_01477 | | oxygen-independent coproporphyrinogen-III oxidase hemN | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.63 | CCNA_02109 | | thiamine biosynthesis protein thiC | 0.27 | CCNA_01477 | | oxygen-independent coproporphyrinogen-III oxidase hemN | low | > 67 |
| Variovorax sp. SCN45 | 0.63 | GFF2000 | | Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) | 0.43 | GFF6957 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 127 |
| Agrobacterium fabrum C58 | 0.63 | Atu2569 | | thiamine biosynthesis protein | 0.32 | Atu1601 | | oxygen-independent coproporphyrinogen III oxidase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.63 | SM_b20615 | | thiamine biosynthesis protein ThiC | 0.32 | SMa1266 | | coproporphyrinogen III oxidase | low | > 103 |
| Azospirillum sp. SherDot2 | 0.63 | MPMX19_00336 | | Phosphomethylpyrimidine synthase | 0.34 | MPMX19_02313 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 112 |
| Variovorax sp. OAS795 | 0.63 | ABID97_RS25235 | | phosphomethylpyrimidine synthase ThiC | 0.45 | ABID97_RS16190 | | oxygen-independent coproporphyrinogen III oxidase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.63 | Ac3H11_2027 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.47 | Ac3H11_976 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 79 |
| Rhodopseudomonas palustris CGA009 | 0.60 | TX73_018540 | | phosphomethylpyrimidine synthase ThiC | 0.33 | TX73_008565 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Bosea sp. OAE506 | 0.60 | ABIE41_RS02770 | | phosphomethylpyrimidine synthase ThiC | 0.34 | ABIE41_RS12085 | | oxygen-independent coproporphyrinogen III oxidase | low | > 77 |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A2008 | | Thiamine biosynthesis protein ThiC (NCBI) | 0.34 | Rru_A2504 | | Oxygen-independent coproporphyrinogen III oxidase HemN (NCBI) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.57 | HMPREF1078_RS03485 | | phosphomethylpyrimidine synthase ThiC | 0.32 | HMPREF1078_RS13395 | | oxygen-independent coproporphyrinogen III oxidase | low | > 61 |
Not shown: 9 genomes with orthologs for ECD_03871 only; 3 genomes with orthologs for ECD_03752 only