Conservation of cofitness between ECD_03253 and ECD_00887 in Escherichia coli BL21

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03253 heat shock protein Hsp33 1.0 ECD_00887 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 0.46 29
Escherichia coli ECRC98 1.00 JDDGAC_20685 hslO Hsp33 family molecular chaperone HslO 1.00 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00302 33 kDa chaperonin 1.00 OHPLBJKB_02786 ATP-dependent Clp protease ATP-binding subunit ClpA low > 73
Escherichia coli ECRC102 1.00 NIAGMN_14825 hslO Hsp33 family molecular chaperone HslO 1.00 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli BW25113 1.00 b3401 yrfI orf, hypothetical protein (VIMSS) 1.00 b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_02675 hslO Hsp33 family molecular chaperone HslO 1.00 BNILDI_20435 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli ECRC100 1.00 OKFHMN_17055 hslO Hsp33 family molecular chaperone HslO 1.00 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Escherichia coli ECRC101 1.00 MCAODC_07585 hslO Hsp33 family molecular chaperone HslO 1.00 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Escherichia coli ECRC99 1.00 KEDOAH_11085 hslO Hsp33 family molecular chaperone HslO 1.00 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECOR27 1.00 NOLOHH_08845 hslO Hsp33 family molecular chaperone HslO 1.00 NOLOHH_22180 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19420 Hsp33 family molecular chaperone HslO 1.00 ECOLIN_RS04695 ATP-dependent Clp protease ATP-binding subunit ClpA low > 55
Escherichia fergusonii Becca 1.00 EFB2_00427 33 kDa chaperonin 1.00 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli ECOR38 1.00 HEPCGN_15875 hslO Hsp33 family molecular chaperone HslO 1.00 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF618 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.97 GFF4901 ATP-dependent Clp protease ATP-binding subunit ClpA low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_4141 Disulfide bond chaperones of the HSP33 family 0.97 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) — —
Enterobacter sp. TBS_079 0.89 MPMX20_04289 33 kDa chaperonin 0.97 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS26150 molecular chaperone Hsp33 0.97 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92
Erwinia tracheiphila SCR3 0.75 LU632_RS22925 hslO Hsp33 family molecular chaperone HslO 0.89 LU632_RS09705 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Serratia liquefaciens MT49 0.75 IAI46_23765 Hsp33 family molecular chaperone HslO 0.90 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pantoea sp. MT58 0.74 IAI47_01835 Hsp33 family molecular chaperone HslO 0.92 IAI47_12945 ATP-dependent Clp protease ATP-binding subunit ClpA low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS01715 Hsp33 family molecular chaperone HslO 0.91 HER17_RS12400 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS19605 Hsp33 family molecular chaperone HslO 0.91 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS19735 Hsp33 family molecular chaperone HslO 0.90 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS20825 Hsp33 family molecular chaperone HslO 0.91 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Rahnella sp. WP5 0.71 EX31_RS04775 Hsp33 family molecular chaperone HslO 0.91 EX31_RS18560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 89
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_13805 Hsp33 family molecular chaperone HslO 0.77 CSW01_05805 ATP-dependent Clp protease ATP-binding subunit ClpA low > 62
Shewanella oneidensis MR-1 0.57 SO0163 hslO chaperonin HslO (NCBI ptt file) 0.69 SO2626 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_0148 hslO Hsp33-like chaperonin (RefSeq) 0.70 Shewana3_1753 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 73
Shewanella loihica PV-4 0.56 Shew_3622 hslO Hsp33-like chaperonin (RefSeq) 0.70 Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_0166 hslO Hsp33-like chaperonin (RefSeq) 0.70 Sama_2056 ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.44 MIT1002_03973 Heat shock protein 33 0.70 MIT1002_01834 ATP-dependent Clp protease ATP-binding subunit ClpA low > 70
Pseudomonas sp. S08-1 0.39 OH686_11065 33 kDa chaperonin HslO 0.65 OH686_00235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Pseudomonas simiae WCS417 0.38 PS417_01205 molecular chaperone Hsp33 0.66 PS417_16510 Clp protease ClpX — —
Marinobacter adhaerens HP15 0.38 HP15_3497 Hsp33-like chaperonin 0.67 HP15_2080 ATP-dependent Clp protease ATP-binding subunit ClpA low > 73
Pseudomonas fluorescens SBW25 0.37 PFLU_RS01315 Hsp33 family molecular chaperone HslO 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS01315 Hsp33 family molecular chaperone HslO 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_11770 molecular chaperone Hsp33 0.65 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA low > 101
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_3900 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.65 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1777 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.65 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_10145 molecular chaperone Hsp33 0.65 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA low > 104
Pseudomonas sp. RS175 0.36 PFR28_04873 33 kDa chaperonin 0.65 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA low > 88
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_422 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.65 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0686 Disulfide bond chaperones of the HSP33 family 0.64 B158DRAFT_1505 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 40
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0169 Hsp33 protein 0.65 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS08605 Hsp33 chaperonin 0.64 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0169 Hsp33 protein 0.65 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS05895 Hsp33 family molecular chaperone HslO 0.62 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA 0.59 109
Pseudomonas stutzeri RCH2 0.34 Psest_3989 Disulfide bond chaperones of the HSP33 family 0.64 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA low > 67
Pseudomonas putida KT2440 0.34 PP_0252 33 kDa chaperonin 0.65 PP_4008 ATP-dependent serine protease — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS12660 Hsp33 chaperonin 0.61 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00500 molecular chaperone Hsp33 0.61 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS05450 Hsp33 family molecular chaperone HslO 0.63 LRK54_RS00420 ATP-dependent Clp protease ATP-binding subunit ClpA low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS05225 Hsp33 family molecular chaperone HslO 0.63 LRK55_RS00160 ATP-dependent Clp protease ATP-binding subunit ClpA low > 63
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS18925 Hsp33 family molecular chaperone HslO 0.64 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_01355 hslO heat-shock protein Hsp33 0.62 OKGIIK_06890 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF5445 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.61 GFF4521 ATP-dependent Clp protease ATP-binding subunit ClpA low > 90
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS10485 Hsp33 family molecular chaperone HslO 0.63 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Acidovorax sp. GW101-3H11 0.30 Ac3H11_295 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.61 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA low > 79
Acinetobacter radioresistens SK82 0.30 MPMX26_00280 33 kDa chaperonin 0.59 MPMX26_01284 ATP-dependent Clp protease ATP-binding subunit ClpA low > 36
Variovorax sp. SCN45 0.30 GFF2763 33 kDa chaperonin HslO 0.62 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA low > 127
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_02324 heat shock protein 33 hsp33 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 67
Caulobacter crescentus NA1000 0.30 CCNA_02324 heat shock protein 33 hsp33 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 66
Dechlorosoma suillum PS 0.30 Dsui_2544 disulfide bond chaperone 0.62 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA low > 51
Ralstonia solanacearum UW163 0.29 UW163_RS12295 molecular chaperone Hsp33 0.62 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14825 molecular chaperone Hsp33 0.62 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18535 Hsp33 chaperonin 0.62 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 81
Lysobacter sp. OAE881 0.29 ABIE51_RS16255 Hsp33 family molecular chaperone HslO 0.64 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA low > 62
Azospirillum brasilense Sp245 0.28 AZOBR_RS19035 molecular chaperone Hsp33 0.59 AZOBR_RS05175 ATP-dependent Clp protease ATP-binding protein low > 97
Sinorhizobium meliloti 1021 0.28 SMc02136 Hsp33-like chaperonin 0.57 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein — —
Castellaniella sp019104865 MT123 0.28 ABCV34_RS00820 Hsp33 family molecular chaperone HslO 0.60 ABCV34_RS05305 ATP-dependent Clp protease ATP-binding subunit ClpA low > 48
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.1584.1 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.62 Xcc-8004.2754.1 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Azospirillum sp. SherDot2 0.28 MPMX19_02179 33 kDa chaperonin 0.59 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum GMI1000 0.28 RS_RS05635 molecular chaperone Hsp33 0.63 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS06190 molecular chaperone Hsp33 0.62 RR42_RS17105 Clp protease ClpX low > 128
Variovorax sp. OAS795 0.28 ABID97_RS20220 Hsp33 family molecular chaperone HslO 0.61 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Agrobacterium fabrum C58 0.27 Atu0430 chaperonin (heat shock protein hsp33) 0.57 Atu1364 ATP-dependent Clp protease, ATP-binding subunit 0.45 11
Rhizobium sp. OAE497 0.26 ABIE40_RS02330 Hsp33 family molecular chaperone 0.58 ABIE40_RS08865 ATP-dependent Clp protease ATP-binding subunit ClpA low > 107
Magnetospirillum magneticum AMB-1 0.26 AMB_RS01615 molecular chaperone 0.59 AMB_RS05705 ATP-dependent Clp protease ATP-binding subunit ClpA low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS08965 Hsp33 family molecular chaperone 0.58 A4249_RS08390 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rhodospirillum rubrum S1H 0.26 Rru_A3275 Hsp33 protein (NCBI) 0.59 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) low > 58
Bosea sp. OAE506 0.25 ABIE41_RS04330 Hsp33 family molecular chaperone 0.58 ABIE41_RS18235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 77
Dinoroseobacter shibae DFL-12 0.23 Dshi_3487 Hsp33 protein (RefSeq) 0.59 Dshi_2939 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.22 TX73_024800 Hsp33 family molecular chaperone 0.58 TX73_016270 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Phaeobacter inhibens DSM 17395 0.22 PGA1_c34860 33 kDa chaperonin (heat shock protein 33) 0.57 PGA1_c25150 ATP-dependent Clp protease ATP-binding subunit low > 62
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3207 Disulfide bond chaperones of the HSP33 family 0.57 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 68

Not shown: 3 genomes with orthologs for ECD_03253 only; 4 genomes with orthologs for ECD_00887 only