| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_1622 | | excinuclease ABC, A subunit | 1.0 | Dsui_2269 | | SOS regulatory protein LexA | 0.63 | 19 |
| Ralstonia sp. UNC404CL21Col | 0.79 | ABZR87_RS07120 | | excinuclease ABC subunit UvrA | 0.58 | ABZR87_RS11330 | | transcriptional repressor LexA | low | > 80 |
| Ralstonia solanacearum UW163 | 0.78 | UW163_RS02345 | | excinuclease ABC subunit UvrA | 0.59 | UW163_RS13205 | | transcriptional repressor LexA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.78 | RALBFv3_RS11235 | | excinuclease ABC subunit UvrA | 0.59 | RALBFv3_RS15760 | | transcriptional repressor LexA | — | — |
| Ralstonia solanacearum GMI1000 | 0.78 | RS_RS02080 | | excinuclease ABC subunit UvrA | 0.57 | RS_RS06540 | | LexA repressor | — | — |
| Ralstonia solanacearum PSI07 | 0.78 | RPSI07_RS22065 | | excinuclease ABC subunit UvrA | 0.58 | RPSI07_RS17605 | | transcriptional repressor LexA | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.77 | QEN71_RS01825 | | excinuclease ABC subunit UvrA | 0.56 | QEN71_RS22595 | | transcriptional repressor LexA | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS02970 | | excinuclease ABC subunit A | 0.56 | BPHYT_RS08785 | | LexA repressor | — | — |
| Herbaspirillum seropedicae SmR1 | 0.77 | HSERO_RS19810 | | excinuclease ABC subunit A | 0.60 | HSERO_RS10365 | | LexA family transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_01913 | | Excinuclease ABC subunit A | 0.56 | H281DRAFT_00777 | | SOS-response transcriptional repressor, LexA | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_000732 | | excinuclease ABC subunit A | 0.53 | ABIE53_001989 | | repressor LexA | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.77 | RR42_RS02145 | | excinuclease ABC subunit A | 0.55 | RR42_RS12615 | | LexA family transcriptional regulator | low | > 128 |
| Pseudomonas putida KT2440 | 0.75 | PP_0483 | | excinuclease (uvrABC system protein A) | 0.57 | PP_2143 | | transcriptional repressor | — | — |
| Pseudomonas stutzeri RCH2 | 0.75 | Psest_3576 | | excinuclease ABC, A subunit | 0.57 | Psest_2646 | | SOS regulatory protein LexA | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_06855 | | ABC-ATPase UvrA | 0.56 | AO353_00465 | | LexA family transcriptional regulator | — | — |
| Pseudomonas sp. S08-1 | 0.75 | OH686_15495 | | excinuclease ABC subunit A | 0.58 | OH686_21960 | | repressor LexA | low | > 80 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_25395 | | excinuclease ABC subunit A | 0.56 | PS417_07610 | | LexA family transcriptional regulator | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_4520 | | Excinuclease ABC subunit A | 0.56 | Psyr_3283 | | SOS-response transcriptional repressor, LexA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_4520 | | Excinuclease ABC subunit A | 0.56 | Psyr_3283 | | SOS-response transcriptional repressor, LexA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_1283 | | Excinuclease ABC subunit A | 0.55 | PfGW456L13_4034 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.56 | PFLU_RS07685 | | transcriptional repressor LexA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.56 | PFLU_RS07685 | | transcriptional repressor LexA | 0.37 | 13 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_03974 | | UvrABC system protein A | 0.57 | PFR28_01117 | | LexA repressor | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.74 | Pf1N1B4_2611 | | Excinuclease ABC subunit A | 0.56 | Pf1N1B4_3910 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_14785 | | ABC-ATPase UvrA | 0.56 | AO356_02295 | | LexA family transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | 0.56 | Pf6N2E2_2283 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS03550 | | excinuclease ABC subunit UvrA | 0.58 | HER17_RS18795 | | transcriptional repressor LexA | — | — |
| Marinobacter adhaerens HP15 | 0.72 | HP15_406 | | excinuclease ABC, ATPase subunit (A) | 0.56 | HP15_2336 | | LexA repressor | 0.50 | 30 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | 0.58 | EX28DRAFT_4269 | | SOS regulatory protein LexA | low | > 76 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | 0.57 | DZA65_RS02890 | | repressor LexA | — | — |
| Pantoea sp. MT58 | 0.72 | IAI47_17815 | | excinuclease ABC subunit UvrA | 0.56 | IAI47_17890 | | repressor LexA | — | — |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | 0.57 | HGI48_RS02735 | | repressor LexA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF1429 | | Excinuclease ABC subunit A | 0.58 | GFF1412 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Rahnella sp. WP5 | 0.72 | EX31_RS11990 | | excinuclease ABC subunit UvrA | 0.58 | EX31_RS11845 | | repressor LexA | low | > 89 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | 0.57 | DDA3937_RS02760 | | repressor LexA | — | — |
| Serratia liquefaciens MT49 | 0.72 | IAI46_22905 | | excinuclease ABC subunit UvrA | 0.58 | IAI46_23005 | | repressor LexA | — | — |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | 0.59 | ECOLIN_RS23335 | | transcriptional repressor LexA | — | — |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_00276 | | UvrABC system protein A | 0.58 | MPMX20_00259 | | LexA repressor | — | — |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | 0.59 | NIAGMN_10815 | lexA | transcriptional repressor LexA | — | — |
| Escherichia fergusonii Becca | 0.72 | EFB2_04533 | | UvrABC system protein A | 0.59 | EFB2_04560 | | LexA repressor | low | > 86 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | 0.59 | MCAODC_03565 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | 0.59 | KEDOAH_15095 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | 0.59 | JDDGAC_16690 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC62 | 0.72 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | 0.59 | BNILDI_06300 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli BW25113 | 0.72 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | 0.59 | b4043 | lexA | LexA repressor (NCBI) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_03983 | | UvrABC system protein A | 0.59 | OHPLBJKB_04000 | | LexA repressor | — | — |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | 0.59 | NOLOHH_05220 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | 0.59 | HEPCGN_11585 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC101 | 0.72 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | 0.59 | OKFHMN_13065 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli BL21 | 0.72 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | 0.59 | ECD_03915 | | transcriptional repressor of SOS regulon | — | — |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS01950 | | excinuclease ABC subunit A | 0.58 | BWI76_RS01875 | | repressor LexA | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_02080 | | UvrABC system protein A | 0.55 | CSW01_00490 | | repressor LexA | — | — |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | 0.57 | LU632_RS22315 | lexA | transcriptional repressor LexA | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.71 | Xcc-8004.3830.1 | | Excinuclease ABC subunit A | 0.40 | Xcc-8004.3112.1 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 74 |
| Shewanella oneidensis MR-1 | 0.71 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | 0.51 | SO4603 | lexA | LexA repressor (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | 0.51 | Shewana3_3989 | | LexA repressor (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_00179 | | Excinuclease ABC subunit A | 0.54 | MIT1002_04036 | | LexA repressor | low | > 70 |
| Shewanella amazonensis SB2B | 0.70 | Sama_0514 | | excinuclease ABC, A subunit (RefSeq) | 0.55 | Sama_3481 | | LexA repressor (RefSeq) | low | > 62 |
| Variovorax sp. SCN45 | 0.70 | GFF4944 | | Excinuclease ABC subunit A | 0.54 | GFF357 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 127 |
| Shewanella loihica PV-4 | 0.70 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | 0.58 | Shew_0127 | | LexA repressor (RefSeq) | low | > 60 |
| Variovorax sp. OAS795 | 0.70 | ABID97_RS04340 | | excinuclease ABC subunit UvrA | 0.55 | ABID97_RS16985 | | transcriptional repressor LexA | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.70 | GFF2755 | | Excinuclease ABC subunit A | 0.52 | GFF4501 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 90 |
| Rhodanobacter denitrificans MT42 | 0.69 | LRK55_RS14925 | | excinuclease ABC subunit UvrA | 0.38 | LRK55_RS18150 | | transcriptional repressor LexA | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.69 | LRK54_RS15210 | | excinuclease ABC subunit UvrA | 0.38 | LRK54_RS00250 | | transcriptional repressor LexA | low | > 59 |
| Acidovorax sp. GW101-3H11 | 0.69 | Ac3H11_4387 | | Excinuclease ABC subunit A | 0.53 | Ac3H11_2392 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.65 | ABCV34_RS12715 | | excinuclease ABC subunit UvrA | 0.48 | ABCV34_RS05120 | | transcriptional repressor LexA | low | > 48 |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_01152 | | UvrABC system protein A | 0.17 | MPMX19_01010 | | LexA repressor | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.61 | CCNA_02673 | | excinuclease ABC subunit A | 0.24 | CCNA_01979 | | LexA repressor | — | — |
| Caulobacter crescentus NA1000 | 0.61 | CCNA_02673 | | excinuclease ABC subunit A | 0.24 | CCNA_01979 | | LexA repressor | 0.55 | 19 |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_1809 | | excinuclease ABC, A subunit (RefSeq) | 0.20 | Dshi_1803 | | transcriptional repressor, LexA family (RefSeq) | — | — |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS15370 | | excinuclease ABC subunit A | 0.18 | AZOBR_RS07430 | | LexA family transcriptional regulator | — | — |
| Agrobacterium fabrum C58 | 0.61 | Atu1513 | | ABC excinuclease subunit A | 0.24 | Atu1395 | | LexA repressor | — | — |
| Sinorhizobium meliloti 1021 | 0.60 | SMc01235 | | excinuclease ABC subunit A | 0.25 | SMc01183 | | LexA repressor | 0.36 | 77 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.60 | A4249_RS08575 | | excinuclease ABC subunit UvrA | 0.23 | A4249_RS06180 | | transcriptional repressor LexA | low | > 48 |
| Rhizobium sp. OAE497 | 0.60 | ABIE40_RS09360 | | excinuclease ABC subunit UvrA | 0.24 | ABIE40_RS08980 | | transcriptional repressor LexA | low | > 107 |
| Bosea sp. OAE506 | 0.60 | ABIE41_RS15100 | | excinuclease ABC subunit UvrA | 0.22 | ABIE41_RS17440 | | transcriptional repressor LexA | low | > 77 |
| Sphingomonas koreensis DSMZ 15582 | 0.59 | Ga0059261_0674 | | excinuclease ABC, A subunit | 0.19 | Ga0059261_0934 | | SOS regulatory protein LexA | — | — |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_014580 | | excinuclease ABC subunit UvrA | 0.23 | TX73_015045 | | transcriptional repressor LexA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c17370 | | uvrABC system protein A | 0.22 | PGA1_c16940 | | lexA repressor | — | — |
| Mycobacterium tuberculosis H37Rv | 0.57 | Rv1638 | | Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA | 0.26 | Rv2720 | | Repressor LexA | — | — |
| Bifidobacterium breve UCC2003 | 0.55 | BBR_RS15510 | | excinuclease ABC subunit UvrA | 0.24 | BBR_RS16985 | | transcriptional repressor LexA | low | > 34 |
Not shown: 22 genomes with orthologs for Dsui_1622 only; 1 genomes with orthologs for Dsui_2269 only