Conservation of cofitness between CSW01_09655 and CSW01_11560 in Vibrio cholerae E7946 ATCC 55056

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09655 SELO family protein 1.0 CSW01_11560 riboflavin biosynthesis protein RibD 0.83 5
Marinobacter adhaerens HP15 0.47 HP15_1144 protein belonging to uncharacterized protein family UPF0061 0.45 HP15_492 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Pseudomonas sp. RS175 0.45 PFR28_05043 Protein adenylyltransferase SelO 0.48 PFR28_03949 Riboflavin biosynthesis protein RibD
Klebsiella michiganensis M5al 0.45 BWI76_RS17085 hypothetical protein 0.52 BWI76_RS06350 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Serratia liquefaciens MT49 0.44 IAI46_11065 YdiU family protein 0.53 IAI46_04895 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Erwinia amylovora T8 0.44 OLJFJH_14650 YdiU family protein 0.54 OLJFJH_18090 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Enterobacter sp. TBS_079 0.44 MPMX20_01907 Protein adenylyltransferase SelO 0.51 MPMX20_01006 Riboflavin biosynthesis protein RibD
Dickeya dadantii 3937 0.44 DDA3937_RS12935 YdiU family protein 0.50 DDA3937_RS05505 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas putida KT2440 0.44 PP_5068 conserved protein of unknown function, UPF0061 family 0.46 PP_0514 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Klebsiella pneumoniae MKP103 0.44 KDGMDA_24305 protein adenylyltransferase SelO 0.53 KDGMDA_14440 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Dickeya dianthicola ME23 0.44 DZA65_RS13470 YdiU family protein 0.50 DZA65_RS05890 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas sp. BP01 0.44 JOY50_RS09370 selO protein adenylyltransferase SelO 0.46 JOY50_RS20125 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1713 Uncharacterized conserved protein 0.53 EX28DRAFT_2556 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3534 Selenoprotein O and cysteine-containing homologs 0.48 GFF4318 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Pectobacterium carotovorum WPP14 0.44 HER17_RS08850 YdiU family protein 0.55 HER17_RS15960 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli BL21 0.44 ECD_01675 UPF0061 family protein 0.53 ECD_00362 fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase
Dickeya dianthicola 67-19 0.44 HGI48_RS13010 YdiU family protein 0.50 HGI48_RS05565 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli BW25113 0.44 b1706 ydiU hypothetical protein (NCBI) 0.53 b0414 ribD fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase (NCBI)
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_12770 hypothetical protein 0.48 AO353_06715 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Pantoea agglomerans CFBP13505 P0401 0.43 PagCFBP13505_RS17670 YdiU family protein 0.54 PagCFBP13505_RS10425 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas lactucae CFBP13502 0.43 GEMAOFIL_00665 Protein adenylyltransferase SelO 0.47 GEMAOFIL_05158 Riboflavin biosynthesis protein RibD
Pseudomonas sp. S08-1 0.43 OH686_09805 UPF0061 protein YdiU 0.46 OH686_15695 riboflavin biosynthesis protein RibD
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_231 Selenoprotein O and cysteine-containing homologs 0.47 PfGW456L13_1313 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Escherichia coli ECOR27 0.43 NOLOHH_17645 selO protein adenylyltransferase SelO 0.53 NOLOHH_01400 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli ECOR38 0.43 HEPCGN_05490 selO protein adenylyltransferase SelO 0.52 HEPCGN_07080 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia fergusonii Becca 0.43 EFB2_02285 Protein adenylyltransferase SelO 0.51 EFB2_03643 Riboflavin biosynthesis protein RibD
Escherichia coli Nissle 1917 0.43 ECOLIN_RS09535 protein adenylyltransferase SelO 0.51 ECOLIN_RS02505 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas simiae WCS417 0.43 PS417_02140 hypothetical protein 0.44 PS417_25265 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Pantoea sp. MT58 0.43 IAI47_10920 YdiU family protein 0.53 IAI47_14770 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli ECRC98 0.43 JDDGAC_01700 selO protein adenylyltransferase SelO 0.51 JDDGAC_12110 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli ECRC100 0.43 OKFHMN_27125 selO protein adenylyltransferase SelO 0.51 OKFHMN_08455 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_09050 hypothetical protein 0.48 AO356_14930 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Pseudomonas orientalis W4I3 0.43 QF045_RS05205 YdiU family protein 0.46 QF045_RS27230 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli ECRC99 0.43 KEDOAH_00985 selO protein adenylyltransferase SelO 0.51 KEDOAH_19510 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli ECRC101 0.43 MCAODC_18285 selO protein adenylyltransferase SelO 0.51 MCAODC_27680 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Escherichia coli ECRC102 0.43 NIAGMN_00940 selO protein adenylyltransferase SelO 0.51 NIAGMN_06510 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas segetis P6 0.43 MPMX49_04221 Protein adenylyltransferase SelO 0.47 MPMX49_00990 Riboflavin biosynthesis protein RibD
Rahnella sp. WP5 0.43 EX31_RS13970 YdiU family protein 0.53 EX31_RS22125 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1498 Selenoprotein O and cysteine-containing homologs 0.47 Pf1N1B4_2649 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Pseudomonas aeruginosa PUPa3 0.42 DQ20_RS51140 YdiU family protein 0.47 DQ20_RS47900 ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas aeruginosa PA14 0.42 IKLFDK_28420 YdiU family protein 0.47 IKLFDK_20910 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3692 Selenoprotein O and cysteine-containing homologs 0.48 Pf6N2E2_4919 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Pseudomonas aeruginosa MRSN321 0.42 DY961_RS10935 YdiU family protein 0.47 DY961_RS27745 ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas fluorescens SBW25 0.42 PFLU_RS02195 YdiU family protein 0.47 PFLU_RS26900 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS02195 YdiU family protein 0.47 PFLU_RS26900 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS11220 hypothetical protein 0.39 HSERO_RS18235 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Pseudomonas sp. SVBP6 0.42 COO64_RS13240 selO protein adenylyltransferase SelO 0.47 COO64_RS15890 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Pseudomonas stutzeri RCH2 0.42 Psest_0396 Uncharacterized conserved protein 0.47 Psest_3552 riboflavin biosynthesis protein RibD
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0494 Protein of unknown function UPF0061 0.46 Psyr_4462 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0494 Protein of unknown function UPF0061 0.46 Psyr_4462 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
Pseudomonas sp. DMC3 0.41 GFF3135 Protein adenylyltransferase SelO 0.47 GFF3827 Riboflavin biosynthesis protein RibD
Erwinia tracheiphila HP pepo 2.2 0.41 IJEDHG_25400 YdiU family protein 0.51 IJEDHG_25995 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Erwinia tracheiphila SCR3 0.41 LU632_RS10980 YdiU family protein 0.51 LU632_RS18595 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2534 Selenoprotein O and cysteine-containing homologs 0.30 Ac3H11_1461 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Shewanella loihica PV-4 0.41 Shew_0262 hypothetical protein (RefSeq) 0.52 Shew_1187 riboflavin biosynthesis protein RibD (RefSeq)
Ralstonia solanacearum UW163 0.41 UW163_RS14490 YdiU family protein 0.42 UW163_RS00740 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS01180 YdiU family protein 0.42 RALBFv3_RS12825 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Ralstonia solanacearum GMI1000 0.40 RS_RS08830 YdiU family protein 0.42 RS_RS03600 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Ralstonia solanacearum PSI07 0.40 RPSI07_RS16295 YdiU family protein 0.42 RPSI07_RS20395 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Variovorax sp. OAS795 0.40 ABID97_RS15700 protein adenylyltransferase SelO 0.38 ABID97_RS17935 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Shewanella oneidensis MR-1 0.40 SO0330 conserved hypothetical protein (NCBI ptt file) 0.50 SO3469 ribD riboflavin biosynthesis protein RibD (NCBI ptt file)
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS12630 protein adenylyltransferase SelO 0.43 ABZR87_RS08885 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Shewanella sp. ANA-3 0.40 Shewana3_3841 hypothetical protein (RefSeq) 0.50 Shewana3_1096 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (RefSeq)
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS09550 hypothetical protein 0.40 BPHYT_RS15380 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Variovorax sp. SCN45 0.39 GFF1330 UPF0061 protein YdiU 0.35 GFF568 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Paraburkholderia graminis OAS925 0.39 ABIE53_002149 uncharacterized protein YdiU (UPF0061 family) 0.40 ABIE53_003242 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00914 Uncharacterized conserved protein YdiU, UPF0061 family 0.40 H281DRAFT_04019 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS21900 YdiU family protein 0.42 QEN71_RS03300 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF4580 Selenoprotein O and cysteine-containing homologs 0.31 GFF5160 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS11160 hypothetical protein 0.41 RR42_RS15555 diaminohydroxyphosphoribosylaminopyrimidine deaminase
Acinetobacter radioresistens SK82 0.34 MPMX26_02624 Protein adenylyltransferase SelO 0.44 MPMX26_00152 Riboflavin biosynthesis protein RibD
Rhodopseudomonas palustris CGA009 0.33 TX73_015750 YdiU family protein 0.31 TX73_014125 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Acinetobacter baumannii LAC-4 0.33 RR41_RS03080 YdiU family protein 0.42 RR41_RS17855 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Xanthobacter sp. DMC5 0.33 GFF2077 Protein adenylyltransferase SelO 0.24 GFF577 Riboflavin biosynthesis protein RibD
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS00335 protein adenylyltransferase SelO 0.40 ABZR86_RS10705 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Castellaniella sp019104865 MT123 0.32 ABCV34_RS04315 YdiU family protein 0.30 ABCV34_RS10545 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Agrobacterium fabrum C58 0.32 Atu0945 hypothetical protein 0.24 Atu8148 bifunctional riboflavin deaminase-reductase
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_09030 selO YdiU family protein 0.41 OKGIIK_11430 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Sinorhizobium meliloti 1021 0.31 SMc00453 hypothetical protein 0.26 SMc01772 riboflavin biosynthesis protein
Rhodanobacter denitrificans MT42 0.31 LRK55_RS15710 YdiU family protein 0.41 LRK55_RS04385 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15955 YdiU family protein 0.41 LRK54_RS04610 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Rhodanobacter sp000427505 FW510-R12 0.31 LRK53_RS12815 YdiU family protein 0.41 LRK53_RS05400 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Lysobacter sp. OAE881 0.31 ABIE51_RS12255 protein adenylyltransferase SelO 0.45 ABIE51_RS04630 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Bosea sp. OAE506 0.30 ABIE41_RS01530 protein adenylyltransferase SelO 0.23 ABIE41_RS19760 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Shewanella amazonensis SB2B 0.30 Sama_2755 hypothetical protein (RefSeq) 0.48 Sama_1016 diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_03360 hypothetical protein 0.27 CA264_17890 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2272.1 Selenoprotein O and cysteine-containing homologs 0.43 Xcc-8004.4395.1 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Dechlorosoma suillum PS 0.29 Dsui_1465 hypothetical protein 0.37 Dsui_1267 riboflavin biosynthesis protein RibD
Cellulophaga baltica 18 0.29 M666_RS02400 YdiU family protein 0.24 M666_RS17750 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
Dinoroseobacter shibae DFL-12 0.29 Dshi_1157 protein of unknown function UPF0061 (RefSeq) 0.25 Dshi_2256 riboflavin biosynthesis protein RibD (RefSeq)
Methylophilus sp. DMC18 0.28 GFF616 Protein adenylyltransferase SelO 0.44 GFF75 Riboflavin biosynthesis protein RibD
Phaeobacter inhibens DSM 17395 0.28 PGA1_c11360 Uncharacterized conserved protein 0.33 PGA1_c08870 riboflavin biosynthesis protein RibD
Alteromonas macleodii MIT1002 0.15 MIT1002_03272 hypothetical protein 0.44 MIT1002_02700 Riboflavin biosynthesis protein RibD

Not shown: 1 genomes with orthologs for CSW01_09655 only; 24 genomes with orthologs for CSW01_11560 only