Conservation of cofitness between CSW01_05360 and CSW01_08760 in Vibrio cholerae E7946 ATCC 55056

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05360 adenine phosphoribosyltransferase 1.0 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase 0.40 20
Shewanella loihica PV-4 0.83 Shew_2236 adenine phosphoribosyltransferase (RefSeq) 0.48 Shew_3173 succinic semialdehyde dehydrogenase (RefSeq) 0.38 10
Shewanella amazonensis SB2B 0.82 Sama_1309 adenine phosphoribosyltransferase (RefSeq) 0.53 Sama_2637 succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq) low > 62
Shewanella sp. ANA-3 0.81 Shewana3_2447 adenine phosphoribosyltransferase (RefSeq) 0.56 Shewana3_3092 succinate semialdehyde dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.79 SO2012 apt adenine phosphoribosyltransferase (NCBI ptt file) 0.56 SO1275 gabD succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) 0.36 19
Rahnella sp. WP5 0.77 EX31_RS22505 adenine phosphoribosyltransferase 0.50 EX31_RS12300 NAD-dependent succinate-semialdehyde dehydrogenase low > 89
Serratia liquefaciens MT49 0.75 IAI46_05225 adenine phosphoribosyltransferase 0.54 IAI46_22160 NAD-dependent succinate-semialdehyde dehydrogenase low > 87
Klebsiella pneumoniae MKP103 0.75 KDGMDA_14875 adenine phosphoribosyltransferase 0.55 KDGMDA_13835 NADP-dependent succinate-semialdehyde dehydrogenase low > 95
Enterobacter sp. TBS_079 0.75 MPMX20_01071 Adenine phosphoribosyltransferase 0.51 MPMX20_04145 Glutarate-semialdehyde dehydrogenase low > 85
Escherichia coli ECOR27 0.74 NOLOHH_01100 apt adenine phosphoribosyltransferase 0.57 NOLOHH_12740 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 76
Escherichia coli BW25113 0.74 b0469 apt adenine phosphoribosyltransferase (NCBI) 0.57 b2661 gabD succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) low > 76
Escherichia fergusonii Becca 0.74 EFB2_03589 Adenine phosphoribosyltransferase 0.54 EFB2_01269 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 86
Escherichia coli ECRC62 0.74 BNILDI_22520 apt adenine phosphoribosyltransferase 0.57 BNILDI_11300 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 75
Dickeya dianthicola ME23 0.74 DZA65_RS06150 adenine phosphoribosyltransferase 0.54 DZA65_RS12400 NAD-dependent succinate-semialdehyde dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03205 Adenine phosphoribosyltransferase 0.57 OHPLBJKB_01071 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 74
Escherichia coli BL21 0.74 ECD_00420 adenine phosphoribosyltransferase 0.57 ECD_02517 succinate-semialdehyde dehydrogenase I, NADP-dependent low > 61
Escherichia coli ECOR38 0.74 HEPCGN_06785 apt adenine phosphoribosyltransferase 0.57 HEPCGN_20150 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 88
Escherichia coli Nissle 1917 0.74 ECOLIN_RS02790 adenine phosphoribosyltransferase 0.55 ECOLIN_RS14840 NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.74 OKFHMN_08170 apt adenine phosphoribosyltransferase 0.57 OKFHMN_20915 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 79
Escherichia coli ECRC99 0.74 KEDOAH_19795 apt adenine phosphoribosyltransferase 0.57 KEDOAH_07225 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.74 MCAODC_27395 apt adenine phosphoribosyltransferase 0.57 MCAODC_11435 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC98 0.74 JDDGAC_11820 apt adenine phosphoribosyltransferase 0.57 JDDGAC_24575 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC102 0.74 NIAGMN_06225 apt adenine phosphoribosyltransferase 0.57 NIAGMN_18680 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 80
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.52 EX28DRAFT_3290 succinate-semialdehyde dehydrogenase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.57 GFF1566 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 78
Dickeya dianthicola 67-19 0.73 HGI48_RS05825 adenine phosphoribosyltransferase 0.54 HGI48_RS11855 NAD-dependent succinate-semialdehyde dehydrogenase low > 71
Klebsiella michiganensis M5al 0.73 BWI76_RS06815 adenine phosphoribosyltransferase 0.57 BWI76_RS05620 NAD-dependent succinate-semialdehyde dehydrogenase low > 92
Pectobacterium carotovorum WPP14 0.73 HER17_RS15710 adenine phosphoribosyltransferase 0.55 HER17_RS09885 NAD-dependent succinate-semialdehyde dehydrogenase low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS18140 apt adenine phosphoribosyltransferase 0.25 LU632_RS10125 NAD-dependent succinate-semialdehyde dehydrogenase low > 73
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS10715 adenine phosphoribosyltransferase 0.52 PagCFBP13505_RS01475 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Pantoea sp. MT58 0.68 IAI47_14480 adenine phosphoribosyltransferase 0.52 IAI47_07580 NAD-dependent succinate-semialdehyde dehydrogenase low > 76
Sinorhizobium meliloti 1021 0.56 SMc02698 adenine phosphoribosyltransferase 0.55 SMc02780 succinate-semialdehyde dehydrogenase [NADP+] protein low > 103
Agrobacterium fabrum C58 0.56 Atu2236 adenine phosphoribosyltransferase 0.55 Atu5137 NAD-dependent succinyl-semialdehyde dehydrogenase low > 89
Rhodopseudomonas palustris CGA009 0.55 TX73_023325 adenine phosphoribosyltransferase 0.54 TX73_012020 NAD-dependent succinate-semialdehyde dehydrogenase low > 86
Rhizobium sp. OAE497 0.54 ABIE40_RS13115 adenine phosphoribosyltransferase 0.54 ABIE40_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase low > 107
Bosea sp. OAE506 0.54 ABIE41_RS11210 adenine phosphoribosyltransferase 0.54 ABIE41_RS20985 NAD-dependent succinate-semialdehyde dehydrogenase low > 77
Phaeobacter inhibens DSM 17395 0.53 PGA1_c06370 adenine phosphoribosyltransferase Apt 0.53 PGA1_c29650 succinate-semialdehyde dehdyrogenase GabD low > 62
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS02125 adenine phosphoribosyltransferase 0.57 RR42_RS21375 succinate-semialdehyde dehydrogenase low > 128
Xanthobacter sp. DMC5 0.53 GFF64 Adenine phosphoribosyltransferase 0.51 GFF2029 Glutarate-semialdehyde dehydrogenase — —
Marinobacter adhaerens HP15 0.52 HP15_2549 adenine phosphoribosyltransferase 0.53 HP15_2020 succinate-semialdehyde dehydrogenase I low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF2440 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.50 GFF1556 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 90
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14375 adenine phosphoribosyltransferase 0.56 ABCV34_RS09380 NADP-dependent succinate-semialdehyde dehydrogenase low > 48
Ralstonia solanacearum UW163 0.51 UW163_RS02365 adenine phosphoribosyltransferase 0.55 UW163_RS04040 NAD-dependent succinate-semialdehyde dehydrogenase — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS22085 adenine phosphoribosyltransferase 0.55 RPSI07_RS23810 NAD-dependent succinate-semialdehyde dehydrogenase low > 81
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS02940 adenine phosphoribosyltransferase 0.54 BPHYT_RS34305 succinate-semialdehyde dehydrogenase low > 109
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS11215 adenine phosphoribosyltransferase 0.55 RALBFv3_RS09540 NAD-dependent succinate-semialdehyde dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.51 RS_RS02065 adenine phosphoribosyltransferase 0.54 RS_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS07105 adenine phosphoribosyltransferase 0.55 ABZR87_RS05195 NAD-dependent succinate-semialdehyde dehydrogenase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_01920 adenine phosphoribosyltransferase 0.55 H281DRAFT_03540 succinate semialdehyde dehydrogenase (EC 1.2.1.16) low > 103
Paraburkholderia graminis OAS925 0.51 ABIE53_000725 adenine phosphoribosyltransferase 0.52 ABIE53_004715 succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase low > 113
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4267 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.55 Ac3H11_1480 Aldehyde dehydrogenase B (EC 1.2.1.22) low > 79
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS01790 adenine phosphoribosyltransferase 0.55 QEN71_RS17165 NAD-dependent succinate-semialdehyde dehydrogenase low > 153
Dinoroseobacter shibae DFL-12 0.50 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) 0.50 Dshi_2887 succinic semialdehyde dehydrogenase (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_3222 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.27 Ga0059261_1680 NAD-dependent aldehyde dehydrogenases low > 68
Dechlorosoma suillum PS 0.48 Dsui_2706 adenine phosphoribosyltransferase 0.54 Dsui_0437 succinate-semialdehyde dehydrogenase low > 51
Azospirillum sp. SherDot2 0.47 MPMX19_06118 Adenine phosphoribosyltransferase 0.52 MPMX19_04920 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 112
Pseudomonas sp. S08-1 0.46 OH686_02250 adenine phosphoribosyltransferase 0.57 OH686_11875 Succinate-semialdehyde dehydrogenase [NAD(P)+] — —
Cellulophaga baltica 18 0.45 M666_RS19415 adenine phosphoribosyltransferase 0.31 M666_RS09875 aldehyde dehydrogenase low > 67
Synechocystis sp000284455 PCC 6803 0.45 SGL_RS09235 adenine phosphoribosyltransferase 0.21 SGL_RS12900 NAD-dependent succinate-semialdehyde dehydrogenase low > 52
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS05410 adenine phosphoribosyltransferase 0.27 ABI39_RS09015 aldehyde dehydrogenase low > 72
Methanococcus maripaludis S2 0.44 MMP_RS03465 adenine phosphoribosyltransferase 0.24 MMP_RS07645 aldehyde dehydrogenase family protein low > 25
Methanococcus maripaludis JJ 0.44 MMJJ_RS01590 adenine phosphoribosyltransferase 0.24 MMJJ_RS06715 lactaldehyde dehydrogenase low > 28
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS19340 adenine phosphoribosyltransferase 0.57 DY961_RS21260 gabD;go_function=succinate-semialdehyde NADP-dependent succinate-semialdehyde dehydrogenase low > 100
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS11530 adenine phosphoribosyltransferase 0.27 HMPREF1058_RS13490 aldehyde dehydrogenase low > 67
Pseudomonas aeruginosa PA14 0.44 IKLFDK_07370 adenine phosphoribosyltransferase 0.57 IKLFDK_24135 NADP-dependent succinate-semialdehyde dehydrogenase low > 98
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS53470 adenine phosphoribosyltransferase 0.57 DQ20_RS38020 gabD;go_function=succinate-semialdehyde NADP-dependent succinate-semialdehyde dehydrogenase low > 101
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS01200 adenine phosphoribosyltransferase 0.23 ABZR88_RS05210 NAD-dependent succinate-semialdehyde dehydrogenase low > 71
Pseudomonas sp. SVBP6 0.42 COO64_RS18635 adenine phosphoribosyltransferase 0.56 COO64_RS12475 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 93
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3866 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.56 Pf1N1B4_1734 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4072 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.57 PfGW456L13_495 Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) (from data) 0.33 32
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_00665 adenine phosphoribosyltransferase 0.56 AO353_11505 succinate-semialdehyde dehydrogenase (EC 1.2.1.16) (from data) low > 101
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_3426 adenine phosphoribosyltransferase 0.57 Psyr_0091 succinate semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_3426 adenine phosphoribosyltransferase 0.57 Psyr_0091 succinate semialdehyde dehydrogenase low > 86
Pseudomonas orientalis W4I3 0.41 QF045_RS22595 adenine phosphoribosyltransferase 0.57 QF045_RS03955 NADP-dependent succinate-semialdehyde dehydrogenase low > 93
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS22400 adenine phosphoribosyltransferase 0.56 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase low > 109
Pseudomonas simiae WCS417 0.41 PS417_20790 adenine phosphoribosyltransferase 0.56 PS417_00895 succinate-semialdehyde dehydrogenase low > 88
Pseudomonas stutzeri RCH2 0.41 Psest_2539 adenine phosphoribosyltransferase 0.57 Psest_3654 succinate-semialdehyde dehydrogenase low > 67
Pseudomonas lactucae CFBP13502 0.41 GEMAOFIL_04303 Adenine phosphoribosyltransferase 0.56 GEMAOFIL_00403 Glutarate-semialdehyde dehydrogenase low > 96
Pseudomonas fluorescens SBW25 0.41 PFLU_RS22400 adenine phosphoribosyltransferase 0.56 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase low > 109
Pseudomonas sp. DMC3 0.41 GFF710 Adenine phosphoribosyltransferase 0.56 GFF4256 Glutarate-semialdehyde dehydrogenase low > 89
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_02490 adenine phosphoribosyltransferase 0.56 AO356_10720 succinate-semialdehyde dehydrogenase low > 104
Pseudomonas sp. RS175 0.41 PFR28_01078 Adenine phosphoribosyltransferase 0.57 PFR28_04755 Glutarate-semialdehyde dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2324 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.57 Pf6N2E2_4014 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 103
Pseudomonas segetis P6 0.41 MPMX49_02302 Adenine phosphoribosyltransferase 0.57 MPMX49_00504 Glutarate-semialdehyde dehydrogenase low > 75
Rhodospirillum rubrum S1H 0.40 Rru_A0607 Adenine phosphoribosyl transferase (NCBI) 0.52 Rru_A0134 Succinic semialdehyde dehydrogenase (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.40 AMB_RS14345 adenine phosphoribosyltransferase 0.54 AMB_RS06710 NAD-dependent succinate-semialdehyde dehydrogenase low > 64
Azospirillum brasilense Sp245 0.40 AZOBR_RS21480 adenine phosphoribosyltransferase 0.56 AZOBR_RS09720 succinate-semialdehyde dehdyrogenase low > 97
Pseudomonas sp. BP01 0.39 JOY50_RS00130 adenine phosphoribosyltransferase 0.56 JOY50_RS18515 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 84
Pseudomonas putida KT2440 0.39 PP_4266 Adenine phosphoribosyltransferase 0.56 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) low > 96
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS05235 adenine phosphoribosyltransferase 0.26 LRK53_RS00385 aldehyde dehydrogenase family protein low > 59
Sphingobium sp. HT1-2 0.34 GFF3761 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.52 GFF4610 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 95
Acinetobacter radioresistens SK82 0.28 MPMX26_02330 Adenine phosphoribosyltransferase 0.54 MPMX26_01991 Glutarate-semialdehyde dehydrogenase low > 36

Not shown: 16 genomes with orthologs for CSW01_05360 only; 13 genomes with orthologs for CSW01_08760 only