| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_09655 | | SELO family protein | 1.0 | CSW01_05925 | | tryptophan synthase subunit alpha | 0.83 | 7 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_1144 | | protein belonging to uncharacterized protein family UPF0061 | 0.30 | HP15_1826 | | tryptophan synthase, alpha subunit | — | — |
| Pseudomonas sp. RS175 | 0.45 | PFR28_05043 | | Protein adenylyltransferase SelO | 0.29 | PFR28_04716 | | Tryptophan synthase alpha chain | — | — |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS17085 | | hypothetical protein | 0.62 | BWI76_RS11840 | | tryptophan synthase subunit alpha | low | > 92 |
| Dickeya dadantii 3937 | 0.44 | DDA3937_RS12935 | | YdiU family protein | 0.68 | DDA3937_RS10460 | | tryptophan synthase subunit alpha | low | > 74 |
| Enterobacter sp. TBS_079 | 0.44 | MPMX20_01907 | | Protein adenylyltransferase SelO | 0.62 | MPMX20_02514 | | Tryptophan synthase alpha chain | low | > 85 |
| Erwinia amylovora T8 | 0.44 | OLJFJH_14650 | | YdiU family protein | 0.61 | OLJFJH_13470 | | tryptophan synthase subunit alpha | low | > 58 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_11065 | | YdiU family protein | 0.67 | IAI46_14045 | | tryptophan synthase subunit alpha | low | > 87 |
| Pseudomonas putida KT2440 | 0.44 | PP_5068 | | conserved protein of unknown function, UPF0061 family | 0.29 | PP_0082 | | tryptophan synthase alpha chain | low | > 96 |
| Klebsiella pneumoniae MKP103 | 0.44 | KDGMDA_24305 | | protein adenylyltransferase SelO | 0.62 | KDGMDA_19545 | | tryptophan synthase subunit alpha | low | > 95 |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS13470 | | YdiU family protein | 0.68 | DZA65_RS10940 | | tryptophan synthase subunit alpha | low | > 75 |
| Pseudomonas sp. BP01 | 0.44 | JOY50_RS09370 | selO | protein adenylyltransferase SelO | 0.29 | JOY50_RS21315 | trpA | tryptophan synthase subunit alpha | low | > 84 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.44 | GFF3534 | | Selenoprotein O and cysteine-containing homologs | 0.62 | GFF2726 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_1713 | | Uncharacterized conserved protein | 0.62 | EX28DRAFT_0932 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | low | > 76 |
| Escherichia coli BL21 | 0.44 | ECD_01675 | | UPF0061 family protein | 0.61 | ECD_01234 | | tryptophan synthase, alpha subunit | low | > 61 |
| Pectobacterium carotovorum WPP14 | 0.44 | HER17_RS08850 | | YdiU family protein | 0.66 | HER17_RS10940 | | tryptophan synthase subunit alpha | low | > 75 |
| Escherichia coli BW25113 | 0.44 | b1706 | ydiU | hypothetical protein (NCBI) | 0.61 | b1260 | trpA | tryptophan synthase subunit alpha (NCBI) | 0.18 | 41 |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS13010 | | YdiU family protein | 0.68 | HGI48_RS10460 | | tryptophan synthase subunit alpha | low | > 71 |
| Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_12770 | | hypothetical protein | 0.29 | AO353_10705 | | tryptophan synthase subunit alpha | low | > 101 |
| Pantoea agglomerans CFBP13505 P0401 | 0.43 | PagCFBP13505_RS17670 | | YdiU family protein | 0.60 | PagCFBP13505_RS07020 | | tryptophan synthase subunit alpha | low | > 74 |
| Pseudomonas lactucae CFBP13502 | 0.43 | GEMAOFIL_00665 | | Protein adenylyltransferase SelO | 0.30 | GEMAOFIL_00241 | | Tryptophan synthase alpha chain | low | > 96 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_09805 | | UPF0061 protein YdiU | 0.30 | OH686_12430 | | tryptophan synthase, alpha subunit | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_231 | | Selenoprotein O and cysteine-containing homologs | 0.29 | PfGW456L13_565 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 87 |
| Escherichia coli ECOR27 | 0.43 | NOLOHH_17645 | selO | protein adenylyltransferase SelO | 0.61 | NOLOHH_20335 | trpA | tryptophan synthase subunit alpha | low | > 76 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_05490 | selO | protein adenylyltransferase SelO | 0.61 | HEPCGN_25515 | trpA | tryptophan synthase subunit alpha | low | > 88 |
| Escherichia fergusonii Becca | 0.43 | EFB2_02285 | | Protein adenylyltransferase SelO | 0.61 | EFB2_02666 | | Tryptophan synthase alpha chain | low | > 86 |
| Escherichia coli Nissle 1917 | 0.43 | ECOLIN_RS09535 | | protein adenylyltransferase SelO | 0.61 | ECOLIN_RS07595 | | tryptophan synthase subunit alpha | — | — |
| Pseudomonas simiae WCS417 | 0.43 | PS417_02140 | | hypothetical protein | 0.29 | PS417_00180 | | tryptophan synthase subunit alpha | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_09050 | | hypothetical protein | 0.29 | AO356_10910 | | tryptophan synthase subunit alpha | low | > 104 |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_01700 | selO | protein adenylyltransferase SelO | 0.61 | JDDGAC_05220 | trpA | tryptophan synthase subunit alpha | low | > 87 |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_00985 | selO | protein adenylyltransferase SelO | 0.61 | KEDOAH_26075 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC101 | 0.43 | MCAODC_18285 | selO | protein adenylyltransferase SelO | 0.61 | MCAODC_15590 | trpA | tryptophan synthase subunit alpha | low | > 87 |
| Escherichia coli ECRC100 | 0.43 | OKFHMN_27125 | selO | protein adenylyltransferase SelO | 0.61 | OKFHMN_02675 | trpA | tryptophan synthase subunit alpha | low | > 79 |
| Pseudomonas orientalis W4I3 | 0.43 | QF045_RS05205 | | YdiU family protein | 0.29 | QF045_RS03115 | | tryptophan synthase subunit alpha | low | > 93 |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_00940 | selO | protein adenylyltransferase SelO | 0.61 | NIAGMN_26845 | trpA | tryptophan synthase subunit alpha | low | > 80 |
| Pantoea sp. MT58 | 0.43 | IAI47_10920 | | YdiU family protein | 0.59 | IAI47_09165 | | tryptophan synthase subunit alpha | low | > 76 |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_1498 | | Selenoprotein O and cysteine-containing homologs | 0.29 | Pf1N1B4_1830 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 87 |
| Rahnella sp. WP5 | 0.43 | EX31_RS13970 | | YdiU family protein | 0.61 | EX31_RS09980 | | tryptophan synthase subunit alpha | low | > 89 |
| Pseudomonas segetis P6 | 0.43 | MPMX49_04221 | | Protein adenylyltransferase SelO | 0.29 | MPMX49_00374 | | Tryptophan synthase alpha chain | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.42 | DQ20_RS51140 | | YdiU family protein | 0.29 | DQ20_RS58785 | trpA;go_function=tryptophan | tryptophan synthase subunit alpha | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.42 | IKLFDK_28420 | | YdiU family protein | 0.29 | IKLFDK_25380 | | tryptophan synthase subunit alpha | low | > 98 |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_3692 | | Selenoprotein O and cysteine-containing homologs | 0.29 | Pf6N2E2_4047 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 103 |
| Pseudomonas aeruginosa MRSN321 | 0.42 | DY961_RS10935 | | YdiU family protein | 0.29 | DY961_RS26380 | trpA;go_function=tryptophan | tryptophan synthase subunit alpha | low | > 100 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS02195 | | YdiU family protein | 0.29 | PFLU_RS00175 | | tryptophan synthase subunit alpha | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS02195 | | YdiU family protein | 0.29 | PFLU_RS00175 | | tryptophan synthase subunit alpha | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS11220 | | hypothetical protein | 0.28 | HSERO_RS16470 | | tryptophan synthase subunit alpha | low | > 78 |
| Pseudomonas sp. SVBP6 | 0.42 | COO64_RS13240 | selO | protein adenylyltransferase SelO | 0.29 | COO64_RS02270 | trpA | tryptophan synthase subunit alpha | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_0396 | | Uncharacterized conserved protein | 0.31 | Psest_0062 | | tryptophan synthase, alpha subunit | low | > 67 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0494 | | Protein of unknown function UPF0061 | 0.28 | Psyr_0033 | | tryptophan synthase, alpha chain | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0494 | | Protein of unknown function UPF0061 | 0.28 | Psyr_0033 | | tryptophan synthase, alpha chain | low | > 86 |
| Pseudomonas sp. DMC3 | 0.41 | GFF3135 | | Protein adenylyltransferase SelO | 0.30 | GFF677 | | Tryptophan synthase alpha chain | low | > 89 |
| Erwinia tracheiphila HP pepo 2.2 | 0.41 | IJEDHG_25400 | | YdiU family protein | 0.55 | IJEDHG_23485 | trpA | tryptophan synthase subunit alpha | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.41 | LU632_RS10980 | | YdiU family protein | 0.56 | LU632_RS12775 | trpA | tryptophan synthase subunit alpha | low | > 73 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_2534 | | Selenoprotein O and cysteine-containing homologs | 0.30 | Ac3H11_1535 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 79 |
| Ralstonia solanacearum UW163 | 0.41 | UW163_RS14490 | | YdiU family protein | 0.32 | UW163_RS11150 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.41 | RALBFv3_RS01180 | | YdiU family protein | 0.32 | RALBFv3_RS02575 | | tryptophan synthase subunit alpha | — | — |
| Shewanella loihica PV-4 | 0.41 | Shew_0262 | | hypothetical protein (RefSeq) | 0.64 | Shew_2256 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.45 | 51 |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS08830 | | YdiU family protein | 0.32 | RS_RS09955 | | tryptophan synthase subunit alpha | low | > 80 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS15700 | | protein adenylyltransferase SelO | 0.26 | ABID97_RS08425 | | tryptophan synthase subunit alpha | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS16295 | | YdiU family protein | 0.32 | RPSI07_RS14740 | | tryptophan synthase subunit alpha | — | — |
| Shewanella oneidensis MR-1 | 0.40 | SO0330 | | conserved hypothetical protein (NCBI ptt file) | 0.65 | SO3024 | trpA | tryptophan synthase, alpha subunit (NCBI ptt file) | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS12630 | | protein adenylyltransferase SelO | 0.31 | ABZR87_RS14490 | | tryptophan synthase subunit alpha | low | > 80 |
| Shewanella sp. ANA-3 | 0.40 | Shewana3_3841 | | hypothetical protein (RefSeq) | 0.64 | Shewana3_1515 | trpA | tryptophan synthase subunit alpha (RefSeq) | low | > 73 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS09550 | | hypothetical protein | 0.28 | BPHYT_RS33865 | | tryptophan synthase alpha chain | low | > 109 |
| Variovorax sp. SCN45 | 0.39 | GFF1330 | | UPF0061 protein YdiU | 0.28 | GFF3882 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | — | — |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_002149 | | uncharacterized protein YdiU (UPF0061 family) | 0.29 | ABIE53_004811 | | tryptophan synthase alpha chain | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_00914 | | Uncharacterized conserved protein YdiU, UPF0061 family | 0.28 | H281DRAFT_06065 | | tryptophan synthase, alpha chain | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS21900 | | YdiU family protein | 0.29 | QEN71_RS17655 | | tryptophan synthase subunit alpha | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS11160 | | hypothetical protein | 0.32 | RR42_RS14350 | | tryptophan synthase alpha chain | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF4580 | | Selenoprotein O and cysteine-containing homologs | 0.29 | GFF3354 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 90 |
| Acinetobacter radioresistens SK82 | 0.34 | MPMX26_02624 | | Protein adenylyltransferase SelO | 0.29 | MPMX26_02611 | | Tryptophan synthase alpha chain | — | — |
| Acinetobacter baumannii LAC-4 | 0.33 | RR41_RS03080 | | YdiU family protein | 0.28 | RR41_RS03140 | | tryptophan synthase subunit alpha | low | > 55 |
| Rhodopseudomonas palustris CGA009 | 0.33 | TX73_015750 | | YdiU family protein | 0.29 | TX73_000365 | | tryptophan synthase subunit alpha | — | — |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS04755 | | protein adenylyltransferase SelO | 0.27 | ABIE40_RS19340 | | tryptophan synthase subunit alpha | — | — |
| Xanthobacter sp. DMC5 | 0.33 | GFF2077 | | Protein adenylyltransferase SelO | 0.28 | GFF3884 | | Tryptophan synthase alpha chain | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS00335 | | protein adenylyltransferase SelO | 0.28 | ABZR86_RS07995 | | tryptophan synthase subunit alpha | 0.46 | 55 |
| Castellaniella sp019104865 MT123 | 0.32 | ABCV34_RS04315 | | YdiU family protein | 0.29 | ABCV34_RS08430 | | tryptophan synthase subunit alpha | — | — |
| Agrobacterium fabrum C58 | 0.32 | Atu0945 | | hypothetical protein | 0.25 | Atu0019 | | tryptophan synthase alpha subunit | — | — |
| Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_09030 | selO | YdiU family protein | 0.28 | OKGIIK_04850 | trpA | tryptophan synthase subunit alpha | low | > 53 |
| Sinorhizobium meliloti 1021 | 0.31 | SMc00453 | | hypothetical protein | 0.26 | SMc02765 | | tryptophan synthase subunit alpha | low | > 103 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS15710 | | YdiU family protein | 0.28 | LRK55_RS01460 | | tryptophan synthase subunit alpha | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS15955 | | YdiU family protein | 0.27 | LRK54_RS01680 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | low | > 59 |
| Rhodanobacter sp000427505 FW510-R12 | 0.31 | LRK53_RS12815 | | YdiU family protein | 0.28 | LRK53_RS08355 | | tryptophan synthase subunit alpha | low | > 59 |
| Lysobacter sp. OAE881 | 0.31 | ABIE51_RS12255 | | protein adenylyltransferase SelO | 0.31 | ABIE51_RS08265 | | tryptophan synthase subunit alpha | low | > 62 |
| Bosea sp. OAE506 | 0.30 | ABIE41_RS01530 | | protein adenylyltransferase SelO | 0.29 | ABIE41_RS03930 | | tryptophan synthase subunit alpha | — | — |
| Shewanella amazonensis SB2B | 0.30 | Sama_2755 | | hypothetical protein (RefSeq) | 0.63 | Sama_2134 | trpA | tryptophan synthase subunit alpha (RefSeq) | low | > 62 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.30 | CA264_03360 | | hypothetical protein | 0.24 | CA264_05085 | | tryptophan synthase subunit alpha | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.30 | Xcc-8004.2272.1 | | Selenoprotein O and cysteine-containing homologs | 0.26 | Xcc-8004.1967.1 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 74 |
| Dechlorosoma suillum PS | 0.29 | Dsui_1465 | | hypothetical protein | 0.32 | Dsui_3191 | | tryptophan synthase, alpha subunit | — | — |
| Cellulophaga baltica 18 | 0.29 | M666_RS02400 | | YdiU family protein | 0.24 | M666_RS09060 | | tryptophan synthase subunit alpha | low | > 67 |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_1157 | | protein of unknown function UPF0061 (RefSeq) | 0.30 | Dshi_0952 | | tryptophan synthase, alpha subunit (RefSeq) | — | — |
| Methylophilus sp. DMC18 | 0.28 | GFF616 | | Protein adenylyltransferase SelO | 0.28 | GFF657 | | Tryptophan synthase alpha chain | — | — |
| Phaeobacter inhibens DSM 17395 | 0.28 | PGA1_c11360 | | Uncharacterized conserved protein | 0.30 | PGA1_c04930 | | tryptophan synthase alpha chain | — | — |
| Alteromonas macleodii MIT1002 | 0.15 | MIT1002_03272 | | hypothetical protein | 0.55 | MIT1002_01425 | | Tryptophan synthase alpha chain | — | — |
Not shown: 0 genomes with orthologs for CSW01_09655 only; 29 genomes with orthologs for CSW01_05925 only