Conservation of cofitness between CSW01_12840 and CSW01_04915 in Vibrio cholerae E7946 ATCC 55056

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12840 magnesium transporter 1.0 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.73 3
Shewanella loihica PV-4 0.64 Shew_3316 magnesium transporter (RefSeq) 0.78 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 60
Shewanella oneidensis MR-1 0.63 SO3966 mgtE-2 magnesium transporter (NCBI ptt file) 0.78 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.63 Shewana3_0667 magnesium transporter (RefSeq) 0.78 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 73
Shewanella amazonensis SB2B 0.61 Sama_3093 magnesium transporter (RefSeq) 0.79 Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.59 MIT1002_00822 Magnesium transporter MgtE 0.76 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB low > 70
Marinobacter adhaerens HP15 0.51 HP15_2447 magnesium transporter 0.66 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB — —
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2076 Mg2+ transporter (mgtE) 0.69 B158DRAFT_0099 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1654.1 Mg/Co/Ni transporter MgtE / CBS domain 0.63 Xcc-8004.2224.1 tRNA-i(6)A37 methylthiotransferase low > 74
Lysobacter sp. OAE881 0.46 ABIE51_RS16005 magnesium transporter 0.63 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Pseudomonas sp. DMC3 0.39 GFF4866 Magnesium transporter MgtE 0.63 GFF3900 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1984 Mg/Co/Ni transporter MgtE / CBS domain 0.63 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase low > 87
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_02945 magnesium transporter 0.63 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase low > 101
Pseudomonas stutzeri RCH2 0.38 Psest_2982 Mg2+ transporter (mgtE) 0.64 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB — —
Pseudomonas sp. RS175 0.38 PFR28_03267 Magnesium transporter MgtE 0.63 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS23240 magnesium transporter 0.63 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS23240 magnesium transporter 0.63 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_18805 magnesium transporter 0.63 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase low > 104
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_04470 Magnesium transporter MgtE 0.63 GEMAOFIL_05078 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 96
Pseudomonas aeruginosa PA14 0.38 IKLFDK_04090 magnesium transporter 0.64 IKLFDK_20540 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 98
Pseudomonas aeruginosa PUPa3 0.38 DQ20_RS44910 mgtE;go_function=magnesium magnesium transporter 0.64 DQ20_RS48275 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 101
Pseudomonas aeruginosa MRSN321 0.38 DY961_RS07890 mgtE;go_function=magnesium magnesium transporter 0.64 DY961_RS12950 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 100
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3454 Mg/Co/Ni transporter MgtE / CBS domain 0.63 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase low > 87
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3552 Divalent cation transporter 0.64 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3552 Divalent cation transporter 0.64 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB — —
Pseudomonas sp. SVBP6 0.38 COO64_RS21540 mgtE magnesium transporter 0.63 COO64_RS15510 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_5680 Mg/Co/Ni transporter MgtE / CBS domain 0.63 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase — —
Pseudomonas orientalis W4I3 0.38 QF045_RS23740 magnesium transporter 0.62 QF045_RS26910 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 93
Pseudomonas simiae WCS417 0.38 PS417_21630 magnesium transporter 0.63 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase low > 88
Pseudomonas segetis P6 0.37 MPMX49_03192 Magnesium transporter MgtE 0.62 MPMX49_01071 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase — —
Methylophilus sp. DMC18 0.37 GFF1624 Magnesium transporter MgtE 0.52 GFF2710 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase — —
Pseudomonas sp. S08-1 0.37 OH686_21360 magnesium transporter 0.64 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB — —
Rhodanobacter denitrificans MT42 0.36 LRK55_RS16360 magnesium transporter 0.64 LRK55_RS13465 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS16635 magnesium transporter 0.63 LRK54_RS13750 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 59
Dechlorosoma suillum PS 0.36 Dsui_0441 Mg2+ transporter MgtE 0.61 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB — —
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS06610 magnesium transporter 0.64 ABZR86_RS09895 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS12285 magnesium transporter 0.63 LRK53_RS14850 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 59
Serratia liquefaciens MT49 0.35 IAI46_18935 magnesium transporter 0.78 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 87
Rahnella sp. WP5 0.34 EX31_RS22660 magnesium transporter 0.76 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 89
Castellaniella sp019104865 MT123 0.33 ABCV34_RS09600 magnesium transporter 0.59 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 48
Klebsiella pneumoniae MKP103 0.33 KDGMDA_26825 magnesium transporter 0.79 KDGMDA_16495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 95
Klebsiella michiganensis M5al 0.33 BWI76_RS19880 magnesium transporter 0.79 BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Erwinia amylovora T8 0.33 OLJFJH_10545 magnesium transporter 0.77 OLJFJH_17145 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 58
Rhodospirillum rubrum S1H 0.32 Rru_A1995 Divalent cation transporter (NCBI) 0.42 Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) low > 58
Azospirillum brasilense Sp245 0.32 AZOBR_RS30975 magnesium transporter 0.42 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase low > 97
Pectobacterium carotovorum WPP14 0.32 HER17_RS06395 magnesium transporter 0.81 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_08135 mgtE magnesium transporter 0.63 OKGIIK_02990 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 53
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0366 Mg2+ transporter (mgtE) 0.77 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 76
Pantoea agglomerans CFBP13505 P0401 0.32 PagCFBP13505_RS15025 magnesium transporter 0.80 PagCFBP13505_RS03360 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Sphingobium sp. HT1-2 0.32 GFF4794 Mg/Co/Ni transporter MgtE, CBS domain-containing 0.39 GFF3937 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) low > 95
Enterobacter sp. TBS_079 0.32 MPMX20_03170 Magnesium transporter MgtE 0.76 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 85
Pantoea sp. MT58 0.32 IAI47_05135 magnesium transporter 0.79 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Xanthobacter sp. DMC5 0.31 GFF542 Magnesium transporter MgtE 0.44 GFF3719 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase — —
Phaeobacter inhibens DSM 17395 0.30 PGA1_c21830 magnesium transporter MgtE 0.41 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB — —
Agrobacterium fabrum C58 0.30 Atu1547 magnesium transport protein 0.41 Atu0356 miaB protein low > 89
Sinorhizobium meliloti 1021 0.30 SMc01261 transporter transmembrane protein 0.42 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase low > 103
Azospirillum sp. SherDot2 0.29 MPMX19_02142 Magnesium transporter MgtE 0.44 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS07360 magnesium transporter 0.41 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_2223 Mg2+ transporter (mgtE) 0.36 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB — —
Rhizobium sp. OAE497 0.29 ABIE40_RS09805 magnesium transporter 0.41 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 107
Bosea sp. OAE506 0.28 ABIE41_RS14795 magnesium transporter 0.41 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 77
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_02256 Mg2+ transporter mgtE 0.42 CCNA_00054 tRNA 2-methylthioadenosine synthase — —
Caulobacter crescentus NA1000 0.28 CCNA_02256 Mg2+ transporter mgtE 0.42 CCNA_00054 tRNA 2-methylthioadenosine synthase — —
Rhodopseudomonas palustris CGA009 0.27 TX73_016355 magnesium transporter 0.38 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS09480 magnesium transporter 0.27 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 88
Dinoroseobacter shibae DFL-12 0.26 Dshi_2770 magnesium transporter (RefSeq) 0.43 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS10195 magnesium transporter 0.28 ABZR88_RS18330 MiaB/RimO family radical SAM methylthiotransferase low > 71
Cellulophaga baltica 18 0.22 M666_RS06840 magnesium transporter 0.29 M666_RS02310 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 67
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS09130 magnesium transporter 0.33 HMPREF1181_RS01770 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 56
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_03855 magnesium transporter 0.30 CA264_05315 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Bacteroides thetaiotaomicron VPI-5482 0.21 BT4042 putative Mg2+ transporter MgtE (NCBI ptt file) 0.33 BT3195 conserved hypothetical protein (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.21 Echvi_0182 Mg2+ transporter (mgtE) 0.31 Echvi_2376 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB — —
Synechocystis sp000284455 PCC 6803 0.21 SGL_RS06105 magnesium transporter 0.35 SGL_RS04845 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 52
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_0523 magnesium transporter (RefSeq) 0.31 DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU1806 mgtE magnesium transporter (TIGR) 0.30 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) low > 55
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_1269 mgtE magnesium transporter 0.34 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB — —
Bacteroides ovatus ATCC 8483 0.20 BACOVA_04831 magnesium transporter 0.32 BACOVA_02895 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 96
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS14125 magnesium transporter 0.32 HMPREF1058_RS11280 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS09775 magnesium transporter 0.32 ABI39_RS05650 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 72
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS04885 magnesium transporter 0.31 HMPREF1078_RS17135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 61

Not shown: 2 genomes with orthologs for CSW01_12840 only; 41 genomes with orthologs for CSW01_04915 only