Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_04470 | | phosphoribosylformylglycinamidine synthase | 1.0 | CSW01_01015 | | DNA helicase II | 0.55 | 15 |
Serratia liquefaciens MT49 | 0.76 | IAI46_19475 | | phosphoribosylformylglycinamidine synthase | 0.71 | IAI46_00735 | | DNA helicase II | 0.46 | 39 |
Escherichia coli BL21 | 0.76 | ECD_02449 | | phosphoribosylformyl-glycineamide synthetase | 0.71 | ECD_03689 | | DNA-dependent ATPase I and helicase II | — | — |
Escherichia coli BW25113 | 0.76 | b2557 | purL | phosphoribosylformylglycinamidine synthase (NCBI) | 0.71 | b3813 | uvrD | DNA-dependent ATPase I and helicase II (NCBI) | low | > 76 |
Escherichia coli ECOR27 | 0.76 | NOLOHH_13145 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | NOLOHH_06540 | uvrD | DNA helicase II | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.76 | OHPLBJKB_01150 | | Phosphoribosylformylglycinamidine synthase | 0.71 | OHPLBJKB_04237 | | DNA helicase II | low | > 73 |
Escherichia coli ECRC99 | 0.76 | KEDOAH_06750 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | KEDOAH_13740 | uvrD | DNA helicase II | — | — |
Escherichia fergusonii Becca | 0.76 | EFB2_01339 | | Phosphoribosylformylglycinamidine synthase | 0.71 | EFB2_04824 | | DNA helicase II | 0.43 | 44 |
Escherichia coli ECRC101 | 0.76 | MCAODC_12000 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | MCAODC_04915 | uvrD | DNA helicase II | low | > 87 |
Escherichia coli ECRC98 | 0.76 | JDDGAC_25135 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | JDDGAC_18035 | uvrD | DNA helicase II | low | > 86 |
Escherichia coli ECRC102 | 0.76 | NIAGMN_19240 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | NIAGMN_12165 | uvrD | DNA helicase II | — | — |
Escherichia coli ECRC100 | 0.76 | OKFHMN_21470 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | OKFHMN_14410 | uvrD | DNA helicase II | low | > 80 |
Escherichia coli ECRC62 | 0.76 | BNILDI_11945 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | BNILDI_04995 | uvrD | DNA helicase II | low | > 75 |
Enterobacter asburiae PDN3 | 0.76 | EX28DRAFT_0092 | | phosphoribosylformylglycinamidine synthase, single chain form | 0.70 | EX28DRAFT_4482 | | ATP-dependent DNA helicase UvrD (EC 3.6.1.-) | low | > 76 |
Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS14470 | | phosphoribosylformylglycinamidine synthase | 0.71 | ECOLIN_RS21885 | | DNA helicase II | low | > 55 |
Escherichia coli ECOR38 | 0.76 | HEPCGN_20615 | purL | phosphoribosylformylglycinamidine synthase | 0.71 | HEPCGN_13115 | uvrD | DNA helicase II | low | > 87 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF2459 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.71 | GFF241 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 78 |
Enterobacter sp. TBS_079 | 0.75 | MPMX20_03426 | | Phosphoribosylformylglycinamidine synthase | 0.70 | MPMX20_04463 | | DNA helicase II | low | > 85 |
Rahnella sp. WP5 | 0.75 | EX31_RS21895 | | phosphoribosylformylglycinamidine synthase | 0.68 | EX31_RS15175 | | DNA helicase II | low | > 89 |
Pantoea sp. MT58 | 0.75 | IAI47_04930 | | phosphoribosylformylglycinamidine synthase | 0.69 | IAI47_18390 | | DNA helicase II | low | > 76 |
Erwinia amylovora T8 | 0.75 | OLJFJH_10305 | | phosphoribosylformylglycinamidine synthase | 0.68 | OLJFJH_06425 | | DNA helicase II | low | > 58 |
Dickeya dadantii 3937 | 0.75 | DDA3937_RS15655 | | phosphoribosylformylglycinamidine synthase | 0.70 | DDA3937_RS19880 | | DNA helicase II | low | > 74 |
Klebsiella michiganensis M5al | 0.74 | BWI76_RS21265 | | phosphoribosylformylglycinamidine synthase | 0.71 | BWI76_RS01220 | | DNA-dependent helicase II | low | > 92 |
Dickeya dianthicola ME23 | 0.74 | DZA65_RS16830 | | phosphoribosylformylglycinamidine synthase | 0.70 | DZA65_RS21080 | | DNA helicase II | low | > 75 |
Dickeya dianthicola 67-19 | 0.74 | HGI48_RS15750 | | phosphoribosylformylglycinamidine synthase | 0.70 | HGI48_RS20035 | | DNA helicase II | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.74 | HER17_RS05910 | | phosphoribosylformylglycinamidine synthase | 0.70 | HER17_RS01360 | | DNA helicase II | low | > 75 |
Shewanella oneidensis MR-1 | 0.73 | SO3287 | purL | phosphoribosylformylglycinamidine synthase (NCBI ptt file) | 0.67 | SO0467 | uvrD | DNA helicase II (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.73 | Shewana3_1240 | | phosphoribosylformylglycinamidine synthase (RefSeq) | 0.67 | Shewana3_0469 | uvrD | DNA-dependent helicase II (RefSeq) | low | > 73 |
Erwinia tracheiphila SCR3 | 0.73 | LU632_RS17975 | purL | phosphoribosylformylglycinamidine synthase | 0.68 | LU632_RS24125 | uvrD | DNA helicase II | — | — |
Shewanella amazonensis SB2B | 0.72 | Sama_2350 | | phosphoribosylformylglycinamidine synthase (RefSeq) | 0.66 | Sama_0419 | uvrD | DNA-dependent helicase II (RefSeq) | low | > 62 |
Shewanella loihica PV-4 | 0.72 | Shew_1301 | | phosphoribosylformylglycinamidine synthase (RefSeq) | 0.66 | Shew_3385 | uvrD | DNA-dependent helicase II (RefSeq) | low | > 60 |
Alteromonas macleodii MIT1002 | 0.71 | MIT1002_01027 | | Phosphoribosylformylglycinamidine synthase | 0.65 | MIT1002_00153 | | DNA helicase II | low | > 70 |
Pseudomonas aeruginosa PA14 | 0.67 | IKLFDK_19210 | | phosphoribosylformylglycinamidine synthase | 0.60 | IKLFDK_26200 | | DNA helicase II | low | > 101 |
Pseudomonas sp. SVBP6 | 0.67 | COO64_RS04695 | purL | phosphoribosylformylglycinamidine synthase | 0.60 | COO64_RS01845 | uvrD | DNA helicase II | low | > 93 |
Pseudomonas putida KT2440 | 0.67 | PP_1037 | | Phosphoribosylformylglycinamidine synthase | 0.60 | PP_5352 | | DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex | — | — |
Pseudomonas sp. BP01 | 0.67 | JOY50_RS11525 | purL | phosphoribosylformylglycinamidine synthase | 0.60 | JOY50_RS08735 | uvrD | DNA helicase II | low | > 84 |
Pseudomonas stutzeri RCH2 | 0.67 | Psest_3159 | | phosphoribosylformylglycinamidine synthase, single chain form | 0.59 | Psest_4098 | | Superfamily I DNA and RNA helicases | low | > 67 |
Pseudomonas sp. S08-1 | 0.67 | OH686_17630 | | phosphoribosylformylglycinamidine synthase | 0.59 | OH686_13045 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_1269 | | phosphoribosylformylglycinamidine synthase | 0.58 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_1269 | | phosphoribosylformylglycinamidine synthase | 0.58 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | — | — |
Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS24685 | | phosphoribosylformylglycinamidine synthase | 0.59 | PFLU_RS29900 | | DNA helicase II | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS24685 | | phosphoribosylformylglycinamidine synthase | 0.59 | PFLU_RS29900 | | DNA helicase II | — | — |
Pseudomonas sp. DMC3 | 0.66 | GFF1962 | | Phosphoribosylformylglycinamidine synthase | 0.59 | GFF512 | | DNA helicase II | low | > 89 |
Pseudomonas sp. RS175 | 0.66 | PFR28_03518 | | Phosphoribosylformylglycinamidine synthase | 0.59 | PFR28_04523 | | DNA helicase II | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.66 | AO356_17520 | | phosphoribosylformylglycinamidine synthase | 0.59 | AO356_11990 | | DNA helicase II | low | > 104 |
Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_887 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.59 | Pf1N1B4_2005 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.66 | Pf6N2E2_5432 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.59 | Pf6N2E2_4273 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_04485 | | phosphoribosylformylglycinamidine synthase | 0.59 | AO353_10055 | | DNA helicase II | — | — |
Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_4835 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.59 | PfGW456L13_724 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
Marinobacter adhaerens HP15 | 0.65 | HP15_1239 | | phosphoribosylformylglycinamidine synthase | 0.56 | HP15_3403 | | UvrD/REP helicase | — | — |
Kangiella aquimarina DSM 16071 | 0.64 | B158DRAFT_2244 | | phosphoribosylformylglycinamidine synthase, single chain form | 0.58 | B158DRAFT_0238 | | Superfamily I DNA and RNA helicases | — | — |
Methylophilus sp. DMC18 | 0.62 | GFF809 | | Phosphoribosylformylglycinamidine synthase | 0.48 | GFF1664 | | DNA helicase II | — | — |
Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS11190 | | phosphoribosylformylglycinamidine synthase | 0.43 | HSERO_RS02160 | | DNA-dependent helicase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS09140 | | phosphoribosylformylglycinamidine synthase | 0.44 | RR42_RS15090 | | DNA helicase | — | — |
Dechlorosoma suillum PS | 0.56 | Dsui_2892 | | phosphoribosylformylglycinamidine synthase, single chain form | 0.45 | Dsui_1227 | | DNA/RNA helicase, superfamily I | — | — |
Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS09515 | | phosphoribosylformylglycinamidine synthase | 0.45 | BPHYT_RS13840 | | DNA-dependent helicase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_00909 | | phosphoribosylformylglycinamidine synthase | 0.44 | H281DRAFT_04469 | | ATP-dependent DNA helicase UvrD | — | — |
Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS21920 | | phosphoribosylformylglycinamidine synthase | 0.44 | QEN71_RS05110 | | 3'-5' exonuclease | — | — |
Paraburkholderia graminis OAS925 | 0.55 | ABIE53_002141 | | phosphoribosylformylglycinamidine synthase | 0.45 | ABIE53_002936 | | DNA helicase-2/ATP-dependent DNA helicase PcrA | — | — |
Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS16190 | | phosphoribosylformylglycinamidine synthase | 0.42 | RPSI07_RS13455 | | DNA-dependent helicase | — | — |
Ralstonia solanacearum GMI1000 | 0.54 | RS_RS08710 | | phosphoribosylformylglycinamidine synthase | 0.42 | RS_RS11220 | | DNA-dependent helicase | — | — |
Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS12730 | | phosphoribosylformylglycinamidine synthase | 0.43 | ABZR87_RS15705 | | UvrD-helicase domain-containing protein | — | — |
Ralstonia solanacearum UW163 | 0.53 | UW163_RS14595 | | phosphoribosylformylglycinamidine synthase | 0.42 | UW163_RS09895 | | DNA-dependent helicase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS01285 | | phosphoribosylformylglycinamidine synthase | 0.42 | RALBFv3_RS03775 | | DNA-dependent helicase | — | — |
Rhodanobacter sp. FW510-T8 | 0.53 | OKGIIK_11505 | purL | phosphoribosylformylglycinamidine synthase | 0.55 | OKGIIK_16775 | | DNA helicase | low | > 52 |
Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS04500 | | phosphoribosylformylglycinamidine synthase | 0.54 | LRK55_RS06595 | | DNA helicase II | — | — |
Variovorax sp. SCN45 | 0.53 | GFF1324 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.43 | GFF4000 | | ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) | low | > 127 |
Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS04720 | | phosphoribosylformylglycinamidine synthase | 0.54 | LRK54_RS06850 | | DNA helicase II | low | > 59 |
Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS19235 | | phosphoribosylformylglycinamidine synthase | 0.55 | ABZR86_RS16965 | | DNA helicase II | low | > 74 |
Variovorax sp. OAS795 | 0.53 | ABID97_RS15675 | | phosphoribosylformylglycinamidine synthase | 0.44 | ABID97_RS09150 | | UvrD-helicase domain-containing protein | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF4566 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.42 | GFF5598 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_539 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.44 | Ac3H11_1660 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
Rhodanobacter sp000427505 FW510-R12 | 0.52 | LRK53_RS05295 | | phosphoribosylformylglycinamidine synthase | 0.53 | LRK53_RS01560 | | UvrD-helicase domain-containing protein | — | — |
Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS04940 | | phosphoribosylformylglycinamidine synthase | 0.42 | ABCV34_RS05210 | | UvrD-helicase domain-containing protein | — | — |
Lysobacter sp. OAE881 | 0.49 | ABIE51_RS04505 | | phosphoribosylformylglycinamidine synthase | 0.55 | ABIE51_RS01985 | | DNA helicase II | low | > 62 |
Xanthomonas campestris pv. campestris strain 8004 | 0.49 | Xcc-8004.4439.1 | | Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) | 0.54 | Xcc-8004.5114.1 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 74 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.26 | CA265_RS05195 | | phosphoribosylformylglycinamidine synthase | 0.31 | CA265_RS12980 | | ATP-dependent DNA helicase | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.26 | Echvi_4428 | | Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain | 0.33 | Echvi_0292 | | Superfamily I DNA and RNA helicases | — | — |
Cellulophaga baltica 18 | 0.26 | M666_RS18255 | | phosphoribosylformylglycinamidine synthase | 0.30 | M666_RS15390 | | 3'-5' exonuclease | — | — |
Parabacteroides merdae CL09T00C40 | 0.26 | HMPREF1078_RS04325 | | phosphoribosylformylglycinamidine synthase | 0.31 | HMPREF1078_RS03560 | | 3'-5' exonuclease | low | > 61 |
Phocaeicola dorei CL03T12C01 | 0.25 | ABI39_RS00405 | | phosphoribosylformylglycinamidine synthase | 0.30 | ABI39_RS17735 | | UvrD-helicase domain-containing protein | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.25 | HMPREF1058_RS07955 | | phosphoribosylformylglycinamidine synthase | 0.30 | HMPREF1058_RS03305 | | UvrD-helicase domain-containing protein | low | > 67 |
Bacteroides thetaiotaomicron VPI-5482 | 0.25 | BT1733 | | putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) | 0.31 | BT0657 | | ATP-dependent DNA helicase (NCBI ptt file) | — | — |
Bacteroides stercoris CC31F | 0.25 | HMPREF1181_RS05605 | | phosphoribosylformylglycinamidine synthase | 0.29 | HMPREF1181_RS16505 | | UvrD-helicase domain-containing protein | low | > 56 |
Bacteroides ovatus ATCC 8483 | 0.25 | BACOVA_04462 | | putative phosphoribosylformylglycinamidine synthase | 0.31 | BACOVA_02365 | | UvrD/REP helicase | — | — |
Fusobacterium nucleatum SB010 | 0.07 | HUW76_05155 | | phosphoribosylformylglycinamidine synthase | 0.29 | HUW76_07175 | | UvrD-helicase domain-containing protein | low | > 35 |
Not shown: 3 genomes with orthologs for CSW01_04470 only; 18 genomes with orthologs for CSW01_01015 only