Conservation of cofitness between CSW01_04470 and CSW01_01015 in Vibrio cholerae E7946 ATCC 55056

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04470 phosphoribosylformylglycinamidine synthase 1.0 CSW01_01015 DNA helicase II 0.55 15
Serratia liquefaciens MT49 0.76 IAI46_19475 phosphoribosylformylglycinamidine synthase 0.71 IAI46_00735 DNA helicase II 0.46 39
Escherichia coli BL21 0.76 ECD_02449 phosphoribosylformyl-glycineamide synthetase 0.71 ECD_03689 DNA-dependent ATPase I and helicase II
Escherichia coli BW25113 0.76 b2557 purL phosphoribosylformylglycinamidine synthase (NCBI) 0.71 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Escherichia coli ECOR27 0.76 NOLOHH_13145 purL phosphoribosylformylglycinamidine synthase 0.71 NOLOHH_06540 uvrD DNA helicase II low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01150 Phosphoribosylformylglycinamidine synthase 0.71 OHPLBJKB_04237 DNA helicase II low > 73
Escherichia coli ECRC99 0.76 KEDOAH_06750 purL phosphoribosylformylglycinamidine synthase 0.71 KEDOAH_13740 uvrD DNA helicase II
Escherichia fergusonii Becca 0.76 EFB2_01339 Phosphoribosylformylglycinamidine synthase 0.71 EFB2_04824 DNA helicase II 0.43 44
Escherichia coli ECRC101 0.76 MCAODC_12000 purL phosphoribosylformylglycinamidine synthase 0.71 MCAODC_04915 uvrD DNA helicase II low > 87
Escherichia coli ECRC98 0.76 JDDGAC_25135 purL phosphoribosylformylglycinamidine synthase 0.71 JDDGAC_18035 uvrD DNA helicase II low > 86
Escherichia coli ECRC102 0.76 NIAGMN_19240 purL phosphoribosylformylglycinamidine synthase 0.71 NIAGMN_12165 uvrD DNA helicase II
Escherichia coli ECRC100 0.76 OKFHMN_21470 purL phosphoribosylformylglycinamidine synthase 0.71 OKFHMN_14410 uvrD DNA helicase II low > 80
Escherichia coli ECRC62 0.76 BNILDI_11945 purL phosphoribosylformylglycinamidine synthase 0.71 BNILDI_04995 uvrD DNA helicase II low > 75
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0092 phosphoribosylformylglycinamidine synthase, single chain form 0.70 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS14470 phosphoribosylformylglycinamidine synthase 0.71 ECOLIN_RS21885 DNA helicase II low > 55
Escherichia coli ECOR38 0.76 HEPCGN_20615 purL phosphoribosylformylglycinamidine synthase 0.71 HEPCGN_13115 uvrD DNA helicase II low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF2459 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.71 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Enterobacter sp. TBS_079 0.75 MPMX20_03426 Phosphoribosylformylglycinamidine synthase 0.70 MPMX20_04463 DNA helicase II low > 85
Rahnella sp. WP5 0.75 EX31_RS21895 phosphoribosylformylglycinamidine synthase 0.68 EX31_RS15175 DNA helicase II low > 89
Pantoea sp. MT58 0.75 IAI47_04930 phosphoribosylformylglycinamidine synthase 0.69 IAI47_18390 DNA helicase II low > 76
Erwinia amylovora T8 0.75 OLJFJH_10305 phosphoribosylformylglycinamidine synthase 0.68 OLJFJH_06425 DNA helicase II low > 58
Dickeya dadantii 3937 0.75 DDA3937_RS15655 phosphoribosylformylglycinamidine synthase 0.70 DDA3937_RS19880 DNA helicase II low > 74
Klebsiella michiganensis M5al 0.74 BWI76_RS21265 phosphoribosylformylglycinamidine synthase 0.71 BWI76_RS01220 DNA-dependent helicase II low > 92
Dickeya dianthicola ME23 0.74 DZA65_RS16830 phosphoribosylformylglycinamidine synthase 0.70 DZA65_RS21080 DNA helicase II low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS15750 phosphoribosylformylglycinamidine synthase 0.70 HGI48_RS20035 DNA helicase II low > 71
Pectobacterium carotovorum WPP14 0.74 HER17_RS05910 phosphoribosylformylglycinamidine synthase 0.70 HER17_RS01360 DNA helicase II low > 75
Shewanella oneidensis MR-1 0.73 SO3287 purL phosphoribosylformylglycinamidine synthase (NCBI ptt file) 0.67 SO0467 uvrD DNA helicase II (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.73 Shewana3_1240 phosphoribosylformylglycinamidine synthase (RefSeq) 0.67 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.73 LU632_RS17975 purL phosphoribosylformylglycinamidine synthase 0.68 LU632_RS24125 uvrD DNA helicase II
Shewanella amazonensis SB2B 0.72 Sama_2350 phosphoribosylformylglycinamidine synthase (RefSeq) 0.66 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Shewanella loihica PV-4 0.72 Shew_1301 phosphoribosylformylglycinamidine synthase (RefSeq) 0.66 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.71 MIT1002_01027 Phosphoribosylformylglycinamidine synthase 0.65 MIT1002_00153 DNA helicase II low > 70
Pseudomonas aeruginosa PA14 0.67 IKLFDK_19210 phosphoribosylformylglycinamidine synthase 0.60 IKLFDK_26200 DNA helicase II low > 101
Pseudomonas sp. SVBP6 0.67 COO64_RS04695 purL phosphoribosylformylglycinamidine synthase 0.60 COO64_RS01845 uvrD DNA helicase II low > 93
Pseudomonas putida KT2440 0.67 PP_1037 Phosphoribosylformylglycinamidine synthase 0.60 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex
Pseudomonas sp. BP01 0.67 JOY50_RS11525 purL phosphoribosylformylglycinamidine synthase 0.60 JOY50_RS08735 uvrD DNA helicase II low > 84
Pseudomonas stutzeri RCH2 0.67 Psest_3159 phosphoribosylformylglycinamidine synthase, single chain form 0.59 Psest_4098 Superfamily I DNA and RNA helicases low > 67
Pseudomonas sp. S08-1 0.67 OH686_17630 phosphoribosylformylglycinamidine synthase 0.59 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1269 phosphoribosylformylglycinamidine synthase 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1269 phosphoribosylformylglycinamidine synthase 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD
Pseudomonas fluorescens SBW25 0.66 PFLU_RS24685 phosphoribosylformylglycinamidine synthase 0.59 PFLU_RS29900 DNA helicase II
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS24685 phosphoribosylformylglycinamidine synthase 0.59 PFLU_RS29900 DNA helicase II
Pseudomonas sp. DMC3 0.66 GFF1962 Phosphoribosylformylglycinamidine synthase 0.59 GFF512 DNA helicase II low > 89
Pseudomonas sp. RS175 0.66 PFR28_03518 Phosphoribosylformylglycinamidine synthase 0.59 PFR28_04523 DNA helicase II
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_17520 phosphoribosylformylglycinamidine synthase 0.59 AO356_11990 DNA helicase II low > 104
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_887 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.59 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5432 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.59 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_04485 phosphoribosylformylglycinamidine synthase 0.59 AO353_10055 DNA helicase II
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4835 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.59 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA
Marinobacter adhaerens HP15 0.65 HP15_1239 phosphoribosylformylglycinamidine synthase 0.56 HP15_3403 UvrD/REP helicase
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_2244 phosphoribosylformylglycinamidine synthase, single chain form 0.58 B158DRAFT_0238 Superfamily I DNA and RNA helicases
Methylophilus sp. DMC18 0.62 GFF809 Phosphoribosylformylglycinamidine synthase 0.48 GFF1664 DNA helicase II
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS11190 phosphoribosylformylglycinamidine synthase 0.43 HSERO_RS02160 DNA-dependent helicase
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS09140 phosphoribosylformylglycinamidine synthase 0.44 RR42_RS15090 DNA helicase
Dechlorosoma suillum PS 0.56 Dsui_2892 phosphoribosylformylglycinamidine synthase, single chain form 0.45 Dsui_1227 DNA/RNA helicase, superfamily I
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS09515 phosphoribosylformylglycinamidine synthase 0.45 BPHYT_RS13840 DNA-dependent helicase
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00909 phosphoribosylformylglycinamidine synthase 0.44 H281DRAFT_04469 ATP-dependent DNA helicase UvrD
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS21920 phosphoribosylformylglycinamidine synthase 0.44 QEN71_RS05110 3'-5' exonuclease
Paraburkholderia graminis OAS925 0.55 ABIE53_002141 phosphoribosylformylglycinamidine synthase 0.45 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA
Ralstonia solanacearum PSI07 0.54 RPSI07_RS16190 phosphoribosylformylglycinamidine synthase 0.42 RPSI07_RS13455 DNA-dependent helicase
Ralstonia solanacearum GMI1000 0.54 RS_RS08710 phosphoribosylformylglycinamidine synthase 0.42 RS_RS11220 DNA-dependent helicase
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS12730 phosphoribosylformylglycinamidine synthase 0.43 ABZR87_RS15705 UvrD-helicase domain-containing protein
Ralstonia solanacearum UW163 0.53 UW163_RS14595 phosphoribosylformylglycinamidine synthase 0.42 UW163_RS09895 DNA-dependent helicase
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS01285 phosphoribosylformylglycinamidine synthase 0.42 RALBFv3_RS03775 DNA-dependent helicase
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_11505 purL phosphoribosylformylglycinamidine synthase 0.55 OKGIIK_16775 DNA helicase low > 52
Rhodanobacter denitrificans MT42 0.53 LRK55_RS04500 phosphoribosylformylglycinamidine synthase 0.54 LRK55_RS06595 DNA helicase II
Variovorax sp. SCN45 0.53 GFF1324 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.43 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 127
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS04720 phosphoribosylformylglycinamidine synthase 0.54 LRK54_RS06850 DNA helicase II low > 59
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS19235 phosphoribosylformylglycinamidine synthase 0.55 ABZR86_RS16965 DNA helicase II low > 74
Variovorax sp. OAS795 0.53 ABID97_RS15675 phosphoribosylformylglycinamidine synthase 0.44 ABID97_RS09150 UvrD-helicase domain-containing protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4566 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.42 GFF5598 ATP-dependent DNA helicase UvrD/PcrA
Acidovorax sp. GW101-3H11 0.52 Ac3H11_539 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.44 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS05295 phosphoribosylformylglycinamidine synthase 0.53 LRK53_RS01560 UvrD-helicase domain-containing protein
Castellaniella sp019104865 MT123 0.50 ABCV34_RS04940 phosphoribosylformylglycinamidine synthase 0.42 ABCV34_RS05210 UvrD-helicase domain-containing protein
Lysobacter sp. OAE881 0.49 ABIE51_RS04505 phosphoribosylformylglycinamidine synthase 0.55 ABIE51_RS01985 DNA helicase II low > 62
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.4439.1 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 0.54 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS05195 phosphoribosylformylglycinamidine synthase 0.31 CA265_RS12980 ATP-dependent DNA helicase
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_4428 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 0.33 Echvi_0292 Superfamily I DNA and RNA helicases
Cellulophaga baltica 18 0.26 M666_RS18255 phosphoribosylformylglycinamidine synthase 0.30 M666_RS15390 3'-5' exonuclease
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS04325 phosphoribosylformylglycinamidine synthase 0.31 HMPREF1078_RS03560 3'-5' exonuclease low > 61
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS00405 phosphoribosylformylglycinamidine synthase 0.30 ABI39_RS17735 UvrD-helicase domain-containing protein
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS07955 phosphoribosylformylglycinamidine synthase 0.30 HMPREF1058_RS03305 UvrD-helicase domain-containing protein low > 67
Bacteroides thetaiotaomicron VPI-5482 0.25 BT1733 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) 0.31 BT0657 ATP-dependent DNA helicase (NCBI ptt file)
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS05605 phosphoribosylformylglycinamidine synthase 0.29 HMPREF1181_RS16505 UvrD-helicase domain-containing protein low > 56
Bacteroides ovatus ATCC 8483 0.25 BACOVA_04462 putative phosphoribosylformylglycinamidine synthase 0.31 BACOVA_02365 UvrD/REP helicase
Fusobacterium nucleatum SB010 0.07 HUW76_05155 phosphoribosylformylglycinamidine synthase 0.29 HUW76_07175 UvrD-helicase domain-containing protein low > 35

Not shown: 3 genomes with orthologs for CSW01_04470 only; 18 genomes with orthologs for CSW01_01015 only