Conservation of cofitness between CSW01_03860 and CSW01_00290 in Vibrio cholerae E7946 ATCC 55056

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03860 protein translocase subunit SecD 1.0 CSW01_00290 gamma carbonic anhydrase family protein 0.67 13
Rahnella sp. WP5 0.67 EX31_RS22105 protein translocase subunit SecD 0.66 EX31_RS15945 gamma carbonic anhydrase family protein
Serratia liquefaciens MT49 0.66 IAI46_04850 protein translocase subunit SecD 0.66 IAI46_23235 gamma carbonic anhydrase family protein
Erwinia tracheiphila SCR3 0.65 LU632_RS18510 secD protein translocase subunit SecD 0.64 LU632_RS22435 gamma carbonic anhydrase family protein
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_16280 secD protein translocase subunit SecD 0.64 IJEDHG_12515 Gamma carbonic anhydrase family protein
Pantoea sp. MT58 0.65 IAI47_14795 protein translocase subunit SecD 0.64 IAI47_02325 gamma carbonic anhydrase family protein
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS10400 protein translocase subunit SecD 0.69 PagCFBP13505_RS22570 gamma carbonic anhydrase family protein
Pectobacterium carotovorum WPP14 0.65 HER17_RS15980 protein translocase subunit SecD 0.63 HER17_RS02260 gamma carbonic anhydrase family protein
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02475 protein translocase subunit SecD 0.65 ECOLIN_RS18830 gamma carbonic anhydrase family protein
Escherichia coli BW25113 0.63 b0408 secD protein export protein SecD (NCBI) 0.65 b3279 yrdA putative transferase (VIMSS)
Escherichia coli BL21 0.63 ECD_00356 SecYEG protein translocase auxillary subunit 0.65 ECD_03130 bacterial transferase hexapeptide domain protein
Dickeya dadantii 3937 0.62 DDA3937_RS05480 protein translocase subunit SecD 0.64 DDA3937_RS19090 gamma carbonic anhydrase family protein
Klebsiella michiganensis M5al 0.62 BWI76_RS06310 protein translocase subunit SecD 0.67 BWI76_RS25635 gamma carbonic anhydrase family protein
Dickeya dianthicola 67-19 0.62 HGI48_RS05540 protein translocase subunit SecD 0.63 HGI48_RS19180 gamma carbonic anhydrase family protein
Dickeya dianthicola ME23 0.62 DZA65_RS05865 protein translocase subunit SecD 0.63 DZA65_RS20305 gamma carbonic anhydrase family protein
Enterobacter sp. TBS_079 0.61 MPMX20_00999 Protein translocase subunit SecD 0.66 MPMX20_04187 Protein YrdA
Erwinia amylovora T8 0.61 OLJFJH_18115 protein translocase subunit SecD 0.63 OLJFJH_03675 gamma carbonic anhydrase family protein
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2563 protein-export membrane protein, SecD/SecF family 0.65 EX28DRAFT_0048 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4307 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.67 GFF2399 carbonic anhydrase, family 3
Escherichia fergusonii Becca 0.61 EFB2_03649 Protein translocase subunit SecD 0.65 EFB2_00544 Protein YrdA
Shewanella amazonensis SB2B 0.61 Sama_2191 secD preprotein translocase subunit SecD (RefSeq) 0.70 Sama_0054 carbonic anhydrase (RefSeq) low > 62
Escherichia coli ECRC98 0.61 JDDGAC_12150 secD Protein translocase subunit SecD 0.65 JDDGAC_21195 yrdA Protein YrdA
Escherichia coli ECRC101 0.61 MCAODC_27720 secD Protein translocase subunit SecD 0.65 MCAODC_08095 yrdA Protein YrdA
Escherichia coli ECRC100 0.61 OKFHMN_08495 secD Protein translocase subunit SecD 0.65 OKFHMN_17575 yrdA Protein YrdA
Escherichia coli ECRC102 0.61 NIAGMN_06550 secD Protein translocase subunit SecD 0.65 NIAGMN_15335 yrdA Protein YrdA low > 80
Escherichia coli ECRC62 0.61 BNILDI_22845 secD Protein translocase subunit SecD 0.65 BNILDI_02155 yrdA Protein YrdA
Escherichia coli ECRC99 0.61 KEDOAH_19470 secD Protein translocase subunit SecD 0.65 KEDOAH_10575 yrdA Protein YrdA
Escherichia coli ECOR38 0.61 HEPCGN_07135 secD Protein translocase subunit SecD 0.65 HEPCGN_16395 yrdA Protein YrdA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03268 Protein translocase subunit SecD 0.65 OHPLBJKB_00424 Protein YrdA
Escherichia coli ECOR27 0.61 NOLOHH_01430 secD Protein translocase subunit SecD 0.65 NOLOHH_09365 yrdA Protein YrdA
Klebsiella pneumoniae MKP103 0.61 KDGMDA_14405 Protein translocase subunit SecD 0.64 KDGMDA_06505 gamma carbonic anhydrase family protein
Alteromonas macleodii MIT1002 0.60 MIT1002_02811 preprotein translocase subunit SecD 0.68 MIT1002_00030 carnitine operon protein CaiE low > 70
Shewanella loihica PV-4 0.60 Shew_2335 secD preprotein translocase subunit SecD (RefSeq) 0.67 Shew_3725 carbonic anhydrase (RefSeq)
Shewanella sp. ANA-3 0.60 Shewana3_1437 secD preprotein translocase subunit SecD (RefSeq) 0.69 Shewana3_0045 carbonic anhydrase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO3111 secD-2 protein-export membrane protein SecD (NCBI ptt file) 0.70 SO0042 carbonic anhydrase, family 3 (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.48 Psest_1244 protein-export membrane protein, SecD/SecF family 0.65 Psest_4319 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Pseudomonas sp. SVBP6 0.47 COO64_RS03860 secD protein translocase subunit SecD 0.66 COO64_RS02330 gamma carbonic anhydrase family protein
Pseudomonas aeruginosa PA14 0.47 IKLFDK_19675 Protein translocase subunit SecD 0.67 IKLFDK_25220 gamma carbonic anhydrase family protein
Pseudomonas sp. BP01 0.46 JOY50_RS22855 secD protein translocase subunit SecD 0.65 JOY50_RS21250 gamma carbonic anhydrase family protein
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4880 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.65 PfGW456L13_625 carbonic anhydrase, family 3
Pseudomonas putida KT2440 0.46 PP_0835 Sec Translocation Complex SecD subunit 0.66 PP_0095 putative enzyme of unknown function
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3196 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.68 Pf6N2E2_4090 carbonic anhydrase, family 3
Pseudomonas sp. S08-1 0.46 OH686_17440 Protein translocase subunit SecD 0.66 OH686_12365 Protein YrdA
Marinobacter adhaerens HP15 0.46 HP15_1481 preprotein translocase subunit SecD 0.58 HP15_3758 transferase hexapeptide repeat protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein 0.63 Psyr_0044 transferase hexapeptide repeat protein
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein 0.63 Psyr_0044 transferase hexapeptide repeat protein
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04799 Protein translocase subunit SecD 0.66 GEMAOFIL_00253 Protein YrdA
Pseudomonas simiae WCS417 0.45 PS417_23235 preprotein translocase subunit SecD 0.66 PS417_00240 anhydrase
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS24890 protein translocase subunit SecD 0.67 PFLU_RS00235 gamma carbonic anhydrase family protein
Pseudomonas fluorescens SBW25 0.45 PFLU_RS24890 protein translocase subunit SecD 0.67 PFLU_RS00235 gamma carbonic anhydrase family protein
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3008 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.66 Pf1N1B4_1843 carbonic anhydrase, family 3
Pseudomonas segetis P6 0.45 MPMX49_01500 Protein translocase subunit SecD 0.67 MPMX49_00360 Protein YrdA
Pseudomonas sp. RS175 0.45 PFR28_00279 Protein translocase subunit SecD 0.68 PFR28_04700 Protein YrdA
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_06680 preprotein translocase subunit SecD 0.67 AO356_11115 anhydrase
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2518 protein-export membrane protein, SecD/SecF family 0.55 B158DRAFT_0464 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Acinetobacter radioresistens SK82 0.45 MPMX26_00436 Protein translocase subunit SecD 0.59 MPMX26_01050 Protein YrdA
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_15800 preprotein translocase subunit SecD 0.67 AO353_10770 anhydrase
Pseudomonas sp. DMC3 0.44 GFF4357 Protein translocase subunit SecD 0.66 GFF664 Protein YrdA
Dechlorosoma suillum PS 0.44 Dsui_3325 protein-export membrane protein, SecD/SecF family 0.51 Dsui_2380 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
Acinetobacter baumannii LAC-4 0.43 RR41_RS02915 protein translocase subunit SecD 0.56 RR41_RS05325 gamma carbonic anhydrase family protein
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS26650 protein translocase subunit SecD 0.33 QEN71_RS12115 gamma carbonic anhydrase family protein
Variovorax sp. SCN45 0.43 GFF5485 Protein translocase subunit SecD 0.39 GFF2764 Carbonic anhydrase-like protein MJ0304
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05695 protein translocase subunit SecD 0.31 RALBFv3_RS14830 gamma carbonic anhydrase family protein
Ralstonia solanacearum UW163 0.43 UW163_RS07930 protein translocase subunit SecD 0.31 UW163_RS12300 gamma carbonic anhydrase family protein
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11605 protein translocase subunit SecD 0.32 RPSI07_RS18530 gamma carbonic anhydrase family protein
Ralstonia solanacearum GMI1000 0.42 RS_RS13585 protein translocase subunit SecD 0.31 RS_RS05640 gamma carbonic anhydrase family protein
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04668 preprotein translocase subunit SecD 0.33 H281DRAFT_00501 Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03420 preprotein translocase subunit SecD 0.33 BPHYT_RS12655 anhydrase
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS01290 protein translocase subunit SecD 0.34 ABZR87_RS10490 gamma carbonic anhydrase family protein
Variovorax sp. OAS795 0.41 ABID97_RS01850 protein translocase subunit SecD 0.37 ABID97_RS20225 gamma carbonic anhydrase family protein
Acidovorax sp. GW101-3H11 0.40 Ac3H11_4414 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.49 Ac3H11_4230 carbonic anhydrase, family 3
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.2170.1 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.47 Xcc-8004.456.1 carbonic anhydrase, family 3
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09530 protein translocase subunit SecD 0.50 ABZR86_RS14950 gamma carbonic anhydrase family protein
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS17410 preprotein translocase subunit SecD 0.61 RR42_RS06425 anhydrase
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS06220 preprotein translocase subunit SecD 0.34 HSERO_RS08610 anhydrase
Lysobacter sp. OAE881 0.39 ABIE51_RS15010 protein translocase subunit SecD 0.47 ABIE51_RS01770 gamma carbonic anhydrase family protein
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15355 protein translocase subunit SecD 0.35 ABCV34_RS13300 gamma carbonic anhydrase family protein
Paraburkholderia graminis OAS925 0.39 ABIE53_000829 preprotein translocase subunit SecD 0.33 ABIE53_002757 carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2568 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.36 GFF5446 carbonic anhydrase, family 3
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_09990 secD protein translocase subunit SecD 0.49 OKGIIK_15375 Carnitine operon protein CaiE
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS06850 protein translocase subunit SecD 0.49 LRK53_RS02385 gamma carbonic anhydrase family protein low > 59
Rhodanobacter denitrificans MT42 0.37 LRK55_RS02870 protein translocase subunit SecD 0.48 LRK55_RS08375 gamma carbonic anhydrase family protein
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS03120 protein translocase subunit SecD 0.48 LRK54_RS08610 gamma carbonic anhydrase family protein
Rhodopseudomonas palustris CGA009 0.28 TX73_014660 protein translocase subunit SecD 0.32 TX73_017715 gamma carbonic anhydrase family protein
Xanthobacter sp. DMC5 0.27 GFF561 Protein translocase subunit SecD 0.31 GFF4616 Protein YrdA
Phaeobacter inhibens DSM 17395 0.26 PGA1_c18920 protein-export membrane protein SecD 0.32 PGA1_c15820 putative phenylacetic acid degradation protein
Magnetospirillum magneticum AMB-1 0.26 AMB_RS12645 protein translocase subunit SecD 0.42 AMB_RS09070 gamma carbonic anhydrase family protein
Azospirillum sp. SherDot2 0.25 MPMX19_01164 Protein translocase subunit SecD 0.42 MPMX19_03844 Protein YrdA
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_02070 protein translocase subunit secD 0.36 CCNA_02726 gamma carbonic anhydrase family protein
Caulobacter crescentus NA1000 0.24 CCNA_02070 protein translocase subunit secD 0.36 CCNA_02726 gamma carbonic anhydrase family protein
Bosea sp. OAE506 0.23 ABIE41_RS15040 protein translocase subunit SecD 0.27 ABIE41_RS14005 gamma carbonic anhydrase family protein
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_3559 protein-export membrane protein, SecD/SecF family 0.36 Ga0059261_0268 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS04665 protein translocase subunit SecD 0.29 A4249_RS02210 gamma carbonic anhydrase family protein

Not shown: 3 genomes with orthologs for CSW01_03860 only; 22 genomes with orthologs for CSW01_00290 only