| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS20995 | | RNA degradosome polyphosphate kinase | 1.0 | BWI76_RS19690 | | LysR family transcriptional regulator | 0.36 | 19 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_03356 | | Polyphosphate kinase | 0.89 | MPMX20_03128 | | HTH-type transcriptional activator CmpR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_0166 | | polyphosphate kinase 1 | 0.89 | EX28DRAFT_0399 | | Transcriptional regulator | low | > 76 |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_13450 | ppk1 | polyphosphate kinase 1 | 0.78 | NOLOHH_15070 | yieE | DNA-binding transcriptional regulator YeiE | low | > 75 |
| Escherichia coli BW25113 | 0.94 | b2501 | ppk | polyphosphate kinase (NCBI) | 0.86 | b2157 | yeiE | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.94 | BNILDI_12260 | ppk1 | polyphosphate kinase 1 | 0.86 | BNILDI_13990 | yieE | DNA-binding transcriptional regulator YeiE | low | > 75 |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_06420 | ppk1 | polyphosphate kinase 1 | 0.86 | KEDOAH_04690 | yieE | DNA-binding transcriptional regulator YeiE | — | — |
| Escherichia coli BL21 | 0.94 | ECD_02393 | | polyphosphate kinase, component of RNA degradosome | 0.86 | ECD_02086 | | putative DNA-binding transcriptional regulator | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_01225 | | Polyphosphate kinase | 0.86 | OHPLBJKB_01554 | | HTH-type transcriptional regulator CysL | low | > 73 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_20965 | ppk1 | polyphosphate kinase 1 | 0.86 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | low | > 87 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_19570 | ppk1 | polyphosphate kinase 1 | 0.86 | NIAGMN_21260 | yieE | DNA-binding transcriptional regulator YeiE | — | — |
| Escherichia coli ECRC101 | 0.94 | MCAODC_12330 | ppk1 | polyphosphate kinase 1 | 0.86 | MCAODC_14545 | yieE | DNA-binding transcriptional regulator YeiE | low | > 87 |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_21800 | ppk1 | polyphosphate kinase 1 | 0.86 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | low | > 80 |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_25745 | ppk1 | polyphosphate kinase 1 | 0.86 | JDDGAC_27455 | yieE | DNA-binding transcriptional regulator YeiE | low | > 86 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS14200 | | polyphosphate kinase 1 | 0.86 | ECOLIN_RS12630 | | DNA-binding transcriptional regulator YeiE | low | > 55 |
| Escherichia fergusonii Becca | 0.94 | EFB2_01397 | | Polyphosphate kinase | 0.78 | EFB2_01699 | | HTH-type transcriptional regulator CysL | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF2167 | | Polyphosphate kinase (EC 2.7.4.1) | 0.87 | GFF3777 | | LysR family transcriptional regulator YeiE | 0.37 | 58 |
| Serratia liquefaciens MT49 | 0.86 | IAI46_18915 | | polyphosphate kinase 1 | 0.79 | IAI46_17215 | | LysR family transcriptional regulator | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.86 | LU632_RS08260 | ppk1 | polyphosphate kinase 1 | 0.79 | LU632_RS17295 | | LysR family transcriptional regulator | low | > 74 |
| Rahnella sp. WP5 | 0.86 | EX31_RS22680 | | polyphosphate kinase 1 | 0.74 | EX31_RS19050 | | LysR family transcriptional regulator | low | > 89 |
| Pantoea sp. MT58 | 0.84 | IAI47_05155 | | polyphosphate kinase 1 | 0.84 | IAI47_06680 | | LysR family transcriptional regulator | low | > 76 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS15150 | | polyphosphate kinase 1 | 0.77 | DDA3937_RS09260 | | LysR family transcriptional regulator | low | > 74 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS16045 | | polyphosphate kinase 1 | 0.76 | DZA65_RS09590 | | LysR family transcriptional regulator | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.83 | HER17_RS06425 | | polyphosphate kinase 1 | 0.79 | HER17_RS12840 | | LysR family transcriptional regulator | low | > 75 |
| Dickeya dianthicola 67-19 | 0.83 | HGI48_RS15225 | | polyphosphate kinase 1 | 0.77 | HGI48_RS09285 | | LysR family transcriptional regulator | low | > 71 |
| Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_03780 | | polyphosphate kinase 1 | 0.34 | CSW01_11795 | | LysR family transcriptional regulator | low | > 62 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_2417 | | polyphosphate kinase (RefSeq) | 0.29 | Shewana3_2367 | | LysR family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.55 | Shew_3079 | | polyphosphate kinase (RefSeq) | 0.34 | Shew_2531 | | LysR family transcriptional regulator (RefSeq) | 0.27 | 24 |
| Shewanella amazonensis SB2B | 0.54 | Sama_2011 | | polyphosphate kinase (RefSeq) | 0.29 | Sama_1882 | | LysR family transcriptional regulator (RefSeq) | low | > 62 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS04845 | | polyphosphate kinase 1 | 0.23 | ABZR88_RS12590 | | LysR family transcriptional regulator | low | > 71 |
| Bacteroides ovatus ATCC 8483 | 0.37 | BACOVA_03769 | | polyphosphate kinase 1 | 0.23 | BACOVA_05396 | | LysR substrate binding domain protein | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.37 | BT0541 | | Polyphosphate kinase (NCBI ptt file) | 0.20 | BT4599 | | putative transcriptional regulator (NCBI ptt file) | low | > 81 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.37 | CA264_15725 | | polyphosphate kinase 1 | 0.22 | CA264_07870 | | LysR family transcriptional regulator | low | > 74 |
| Phocaeicola dorei CL03T12C01 | 0.36 | ABI39_RS14955 | | RNA degradosome polyphosphate kinase | 0.24 | ABI39_RS18875 | | LysR family transcriptional regulator | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.35 | HMPREF1078_RS16770 | | RNA degradosome polyphosphate kinase | 0.24 | HMPREF1078_RS00720 | | LysR family transcriptional regulator | low | > 61 |
| Bacteroides stercoris CC31F | 0.33 | HMPREF1181_RS08035 | | RNA degradosome polyphosphate kinase | 0.22 | HMPREF1181_RS11950 | | LysR family transcriptional regulator | low | > 56 |
| Phocaeicola vulgatus CL09T03C04 | 0.32 | HMPREF1058_RS02340 | | RNA degradosome polyphosphate kinase | 0.24 | HMPREF1058_RS04990 | | LysR family transcriptional regulator | low | > 67 |
| Rhodanobacter denitrificans FW104-10B01 | 0.30 | LRK54_RS16000 | | polyphosphate kinase 1 | 0.29 | LRK54_RS12835 | | LysR family transcriptional regulator | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.30 | LRK55_RS15755 | | polyphosphate kinase 1 | 0.29 | LRK55_RS12535 | | LysR family transcriptional regulator | low | > 63 |
| Pseudomonas sp. S08-1 | 0.29 | OH686_13995 | | polyphosphate kinase 1 | 0.42 | OH686_18820 | | Transcriptional regulator, LysR family | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.29 | ABZR86_RS07490 | | polyphosphate kinase 1 | 0.31 | ABZR86_RS19780 | | LysR family transcriptional regulator | low | > 74 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_874 | | Polyphosphate kinase (EC 2.7.4.1) | 0.37 | PfGW456L13_4660 | | LysR family transcriptional regulator PA3398 | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_08885 | | polyphosphate kinase | 0.40 | AO353_16845 | | LysR family transcriptional regulator | 0.40 | 64 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_2208 | | Polyphosphate kinase (EC 2.7.4.1) | 0.40 | Pf1N1B4_3152 | | LysR family transcriptional regulator PA3398 | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS29095 | | polyphosphate kinase 1 | 0.45 | PFLU_RS09365 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS29095 | | polyphosphate kinase 1 | 0.45 | PFLU_RS09365 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_27435 | | polyphosphate kinase | 0.39 | PS417_05850 | | LysR family transcriptional regulator | 0.31 | 84 |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_0293 | | Polyphosphate kinase | 0.45 | Psyr_3312 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_0293 | | Polyphosphate kinase | 0.45 | Psyr_3312 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas putida KT2440 | 0.29 | PP_5217 | | Polyphosphate kinase | 0.40 | PP_1637 | | Transcriptional regulator, LysR family | low | > 96 |
| Rhodanobacter sp. FW510-T8 | 0.29 | OKGIIK_08995 | ppk1 | RNA degradosome polyphosphate kinase | 0.28 | OKGIIK_02230 | lysR | LysR family transcriptional regulator | low | > 52 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS08195 | | RNA degradosome polyphosphate kinase | 0.25 | A4249_RS01115 | | LysR substrate-binding domain-containing protein | — | — |
| Pseudomonas sp. RS175 | 0.29 | PFR28_04345 | | Polyphosphate kinase | 0.40 | PFR28_00480 | | HTH-type transcriptional activator CmpR | low | > 88 |
| Synechococcus elongatus PCC 7942 | 0.29 | Synpcc7942_1566 | ppk | polyphosphate kinase | 0.24 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_4453 | | Polyphosphate kinase (EC 2.7.4.1) | 0.40 | Pf6N2E2_2984 | | LysR family transcriptional regulator PA3398 | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_12895 | | polyphosphate kinase | 0.41 | AO356_05630 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_3732 | | polyphosphate kinase 1 | 0.39 | Psest_2863 | | Transcriptional regulator | low | > 67 |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS16235 | | polyphosphate kinase | 0.25 | AZOBR_RS32560 | | LysR family transcriptional regulator | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_015770 | | RNA degradosome polyphosphate kinase | 0.23 | TX73_009100 | | LysR family transcriptional regulator | low | > 86 |
| Dechlorosoma suillum PS | 0.28 | Dsui_2814 | | polyphosphate kinase 1 | 0.40 | Dsui_2257 | | transcriptional regulator | low | > 51 |
| Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS14065 | | polyphosphate kinase 1 | 0.43 | ABZR87_RS10365 | | LysR family transcriptional regulator | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS13435 | | polyphosphate kinase | 0.41 | RR42_RS13965 | | LysR family transcriptional regulator | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS06305 | | polyphosphate kinase | 0.44 | HSERO_RS21575 | | transcriptional regulator | low | > 78 |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_01149 | | Polyphosphate kinase | 0.24 | MPMX19_00813 | | HTH-type transcriptional regulator CysL | low | > 112 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_02335 | | Polyphosphate kinase | 0.39 | MPMX26_02541 | | HTH-type transcriptional regulator CysL | low | > 36 |
| Rhizobium sp. OAE497 | 0.27 | ABIE40_RS06575 | | RNA degradosome polyphosphate kinase | 0.24 | ABIE40_RS15535 | | LysR family transcriptional regulator | low | > 107 |
| Rhodospirillum rubrum S1H | 0.27 | Rru_A2161 | | Polyphosphate kinase (NCBI) | 0.21 | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | 0.52 | 30 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS07705 | | polyphosphate kinase 1 | 0.43 | RS_RS05515 | | LysR family transcriptional regulator | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.27 | RPSI07_RS15330 | | polyphosphate kinase 1 | 0.43 | RPSI07_RS18655 | | LysR family transcriptional regulator | low | > 81 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS15425 | | polyphosphate kinase 1 | 0.43 | UW163_RS12175 | | LysR family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS02115 | | polyphosphate kinase 1 | 0.43 | RALBFv3_RS14705 | | LysR family transcriptional regulator | low | > 76 |
| Sinorhizobium meliloti 1021 | 0.27 | SMc00618 | | polyphosphate kinase | 0.20 | SM_b20203 | | transcriptional regulator | — | — |
| Agrobacterium fabrum C58 | 0.26 | Atu1144 | | polyphosphate kinase | 0.22 | Atu0672 | | transcriptional regulator, LysR family | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS04860 | | polyphosphate kinase 1 | 0.25 | QEN71_RS34015 | | LysR family transcriptional regulator | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_002988 | | polyphosphate kinase | 0.22 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | 0.39 | 55 |
| Bifidobacterium breve UCC2003 | 0.26 | BBR_RS19645 | | RNA degradosome polyphosphate kinase | 0.13 | BBR_RS13510 | | LysR family transcriptional regulator | low | > 34 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.26 | H281DRAFT_04418 | | polyphosphate kinase | 0.22 | H281DRAFT_03013 | | transcriptional regulator, LysR family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS14110 | | polyphosphate kinase | 0.22 | BPHYT_RS29890 | | LysR family transcriptional regulator | low | > 109 |
| Mycobacterium tuberculosis H37Rv | 0.26 | Rv2984 | | Polyphosphate kinase PPK (polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase) | 0.14 | Rv2282c | | Probable transcription regulator (LysR family) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.4064.1 | | Polyphosphate kinase (EC 2.7.4.1) | 0.42 | Xcc-8004.979.1 | | LysR family transcriptional regulator YeiE | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.26 | Echvi_2996 | | polyphosphate kinase 1 | 0.21 | Echvi_1204 | | Transcriptional regulator | low | > 79 |
| Marinobacter adhaerens HP15 | 0.25 | HP15_3334 | | polyphosphate kinase | 0.32 | HP15_2201 | | transcriptional regulator, LysR family | low | > 73 |
| Variovorax sp. SCN45 | 0.25 | GFF1089 | | Polyphosphate kinase (EC 2.7.4.1) | 0.41 | GFF3160 | | Transcriptional regulator YeiE, LysR family | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.24 | ABCV34_RS15580 | | polyphosphate kinase 1 | 0.31 | ABCV34_RS05920 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Variovorax sp. OAS795 | 0.24 | ABID97_RS14575 | | polyphosphate kinase 1 | 0.20 | ABID97_RS24450 | | LysR family transcriptional regulator | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF4226 | | Polyphosphate kinase (EC 2.7.4.1) | 0.37 | GFF333 | | LysR family transcriptional regulator YeiE | low | > 90 |
Not shown: 11 genomes with orthologs for BWI76_RS20995 only; 6 genomes with orthologs for BWI76_RS19690 only