| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS33580 | | geranyltranstransferase | 1.0 | BPHYT_RS17520 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 0.46 | 4 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_06016 | | farnesyl-diphosphate synthase | 0.85 | H281DRAFT_05691 | | [protein release factor]-glutamine N5-methyltransferase | — | — |
| Paraburkholderia graminis OAS925 | 0.95 | ABIE53_004858 | | farnesyl diphosphate synthase | 0.81 | ABIE53_003664 | | release factor glutamine methyltransferase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.86 | QEN71_RS15235 | | polyprenyl synthetase family protein | 0.71 | QEN71_RS27675 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS19130 | | geranyl transferase | 0.48 | HSERO_RS21375 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | — | — |
| Dechlorosoma suillum PS | 0.57 | Dsui_3509 | | geranylgeranyl pyrophosphate synthase | 0.47 | Dsui_0119 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS15010 | | geranyl transferase | 0.46 | RR42_RS18480 | | SAM-dependent methyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS15640 | | polyprenyl synthetase family protein | 0.48 | ABZR87_RS02260 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS03710 | | (2E,6E)-farnesyl diphosphate synthase | 0.47 | RALBFv3_RS06595 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS09960 | | (2E,6E)-farnesyl diphosphate synthase | 0.47 | UW163_RS07030 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS13520 | | polyprenyl synthetase family protein | 0.47 | RPSI07_RS10635 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS11155 | | polyprenyl synthetase family protein | 0.49 | RS_RS14545 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Castellaniella sp019104865 MT123 | 0.52 | ABCV34_RS02230 | | polyprenyl synthetase family protein | 0.47 | ABCV34_RS14060 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS06815 | | (2E,6E)-farnesyl diphosphate synthase | 0.37 | ABIE51_RS05490 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.48 | OKGIIK_10250 | ispA | geranyl transferase | 0.40 | OKGIIK_02015 | | Release factor glutamine methyltransferase | — | — |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS23555 | | polyprenyl synthetase family protein | 0.34 | LU632_RS10740 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Variovorax sp. SCN45 | 0.47 | GFF6129 | | (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) | 0.38 | GFF2523 | | Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297) | 0.85 | 58 |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS03365 | | polyprenyl synthetase family protein | 0.35 | LRK54_RS12410 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS03115 | | polyprenyl synthetase family protein | 0.35 | LRK55_RS12145 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_3565 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.41 | Ac3H11_4779 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS09275 | | polyprenyl synthetase family protein | 0.39 | ABID97_RS07185 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS21690 | | farnesyl diphosphate synthase | 0.40 | ABZR86_RS19370 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1890.1 | | hypothetical protein | 0.35 | Xcc-8004.4220.1 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_1919 | | farnesyl-diphosphate synthase (EC 2.5.1.10) | 0.36 | B158DRAFT_2064 | | [protein release factor]-glutamine N5-methyltransferase (EC 2.1.1.-) | — | — |
| Marinobacter adhaerens HP15 | 0.44 | HP15_581 | | geranyltranstransferase | 0.35 | HP15_713 | | modification methylase, HemK family | — | — |
| Pseudomonas sp. S08-1 | 0.44 | OH686_15785 | | (2E,6E)-farnesyl diphosphate synthase | 0.39 | OH686_07905 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Pseudomonas putida KT2440 | 0.43 | PP_0528 | | farnesyl diphosphate synthase | 0.39 | PP_0734 | | release factor-(glutamine-N5) methyltransferase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_1326 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) | 0.36 | PfGW456L13_1583 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Shewanella loihica PV-4 | 0.42 | Shew_2770 | | polyprenyl synthetase (RefSeq) | 0.33 | Shew_2911 | | HemK family modification methylase (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_06650 | | geranyl transferase | 0.38 | AO353_14790 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_0642 | | Geranylgeranyl pyrophosphate synthase | 0.40 | Psest_1114 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_2662 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.39 | Pf1N1B4_2920 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_4933 | | Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.39 | Pf6N2E2_5222 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF5576 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.35 | GFF1267 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Pantoea sp. MT58 | 0.41 | IAI47_14735 | | (2E,6E)-farnesyl diphosphate synthase | 0.32 | IAI47_11265 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Pseudomonas sp. RS175 | 0.41 | PFR28_03936 | | Farnesyl diphosphate synthase | 0.40 | PFR28_03654 | | Release factor glutamine methyltransferase | — | — |
| Shewanella oneidensis MR-1 | 0.41 | SO1526 | ispA | geranyltranstransferase (NCBI ptt file) | 0.33 | SO3832 | | hemK family protein (NCBI ptt file) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_0605 | | farnesyl-diphosphate synthase | 0.37 | Psyr_0950 | | [protein release factor]-glutamine N5-methyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_0605 | | farnesyl-diphosphate synthase | 0.37 | Psyr_0950 | | [protein release factor]-glutamine N5-methyltransferase | — | — |
| Shewanella amazonensis SB2B | 0.40 | Sama_2435 | | geranyltranstransferase (RefSeq) | 0.33 | Sama_2565 | | hemK family protein (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_14995 | | geranyl transferase | 0.40 | AO356_16500 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_04565 | | (2E,6E)-farnesyl diphosphate synthase | 0.35 | CSW01_10840 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Rahnella sp. WP5 | 0.40 | EX31_RS22160 | | (2E,6E)-farnesyl diphosphate synthase | 0.32 | EX31_RS07310 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_01012 | | Farnesyl diphosphate synthase | 0.36 | MPMX20_02635 | | Release factor glutamine methyltransferase | — | — |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS06385 | | (2E,6E)-farnesyl diphosphate synthase | 0.37 | BWI76_RS17430 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS15930 | | (2E,6E)-farnesyl diphosphate synthase | 0.35 | HER17_RS10485 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_2550 | | Geranylgeranyl pyrophosphate synthase | 0.34 | EX28DRAFT_0831 | | protein-(glutamine-N5) methyltransferase, release factor-specific | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF4325 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) | 0.37 | GFF2773 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | — | — |
| Pseudomonas simiae WCS417 | 0.38 | PS417_25200 | | geranyl transferase | 0.34 | PS417_03610 | | SAM-dependent methyltransferase | — | — |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_12070 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | JDDGAC_06120 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_27640 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | MCAODC_21805 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_06470 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | NIAGMN_27780 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_19550 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | KEDOAH_25450 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_08415 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | OKFHMN_28455 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_03255 | | Farnesyl diphosphate synthase | 0.35 | OHPLBJKB_02475 | | Release factor glutamine methyltransferase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS26840 | | hypothetical protein | 0.34 | PFLU_RS03660 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS02540 | | (2E,6E)-farnesyl diphosphate synthase | 0.35 | ECOLIN_RS07325 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC62 | 0.38 | BNILDI_22780 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | BNILDI_18760 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS26840 | | hypothetical protein | 0.34 | PFLU_RS03660 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli BL21 | 0.38 | ECD_00369 | | geranyltranstransferase | 0.36 | ECD_01187 | | RF-1 and RF-2 N5-glutamine methyltransferase | — | — |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_01365 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | NOLOHH_20605 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_07045 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.35 | HEPCGN_24920 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Escherichia fergusonii Becca | 0.38 | EFB2_03636 | | Farnesyl diphosphate synthase | 0.35 | EFB2_02715 | | Release factor glutamine methyltransferase | — | — |
| Escherichia coli BW25113 | 0.38 | b0421 | ispA | geranyltranstransferase (NCBI) | 0.35 | b1212 | prmC | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_2900 | | farnesyl-diphosphate synthase (RefSeq) | 0.33 | Shewana3_0770 | | HemK family modification methylase (RefSeq) | — | — |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS05595 | | (2E,6E)-farnesyl diphosphate synthase | 0.37 | HGI48_RS10935 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_00661 | | Farnesyl diphosphate synthase | 0.28 | MPMX26_01175 | | Release factor glutamine methyltransferase | — | — |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS05535 | | (2E,6E)-farnesyl diphosphate synthase | 0.35 | DDA3937_RS10985 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.37 | Ga0059261_1008 | | Geranylgeranyl pyrophosphate synthase | 0.22 | Ga0059261_1601 | | protein-(glutamine-N5) methyltransferase, release factor-specific | low | > 68 |
| Dickeya dianthicola ME23 | 0.37 | DZA65_RS05920 | | (2E,6E)-farnesyl diphosphate synthase | 0.36 | DZA65_RS11395 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Serratia liquefaciens MT49 | 0.36 | IAI46_04930 | | (2E,6E)-farnesyl diphosphate synthase | 0.35 | IAI46_10285 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_05065 | | Farnesyl diphosphate synthase | 0.25 | MPMX19_02446 | | Release factor glutamine methyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS20795 | | farnesyl-diphosphate synthase | 0.24 | AZOBR_RS18930 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_002715 | | polyprenyl synthetase family protein | 0.27 | TX73_003140 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Alteromonas macleodii MIT1002 | 0.33 | MIT1002_02692 | | Farnesyl diphosphate synthase | 0.36 | MIT1002_01515 | | Release factor glutamine methyltransferase | — | — |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_02150 | | dimethylallyltransferase/geranyltranstransferase | 0.26 | CCNA_00918 | | peptide release factor-glutamine N5-methyltransferase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_02150 | | dimethylallyltransferase/geranyltranstransferase | 0.26 | CCNA_00918 | | peptide release factor-glutamine N5-methyltransferase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.32 | DVU1349 | SelGGPS | geranylgeranyl diphosphate synthase (TIGR) | 0.26 | DVU2916 | hemK | hemK protein (TIGR) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS09695 | | polyprenyl synthetase family protein | 0.24 | A4249_RS11000 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Agrobacterium fabrum C58 | 0.30 | Atu2721 | | geranyltranstransferase | 0.27 | Atu4175 | | protoporphyrinogen oxidase | — | — |
| Sinorhizobium meliloti 1021 | 0.30 | SMc03884 | | geranyltranstransferase | 0.27 | SMc02435 | | methyltransferase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.29 | AMB_RS14610 | | polyprenyl synthetase family protein | 0.24 | AMB_RS08180 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS18720 | | polyprenyl synthetase family protein | 0.27 | ABIE40_RS17290 | | peptide chain release factor N(5)-glutamine methyltransferase | low | > 107 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c34160 | | geranyltranstransferase IspA | 0.27 | PGA1_c19880 | | methyltransferase, HemK family | — | — |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS08680 | | polyprenyl synthetase family protein | 0.21 | ABIE41_RS23805 | | peptide chain release factor N(5)-glutamine methyltransferase | — | — |
Not shown: 7 genomes with orthologs for BPHYT_RS33580 only; 7 genomes with orthologs for BPHYT_RS17520 only