Conservation of cofitness between BPHYT_RS17885 and BPHYT_RS15920 in Burkholderia phytofirmans PsJN

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17885 3-dehydroquinate synthase 1.0 BPHYT_RS15920 argininosuccinate synthase 0.91 8
Paraburkholderia graminis OAS925 0.96 ABIE53_003740 3-dehydroquinate synthase 1.00 ABIE53_003355 argininosuccinate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_05615 3-dehydroquinate synthase 0.99 H281DRAFT_04120 argininosuccinate synthase — —
Paraburkholderia sabiae LMG 24235 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.16 QEN71_RS09235 argininosuccinate synthase 0.76 41
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS19005 3-dehydroquinate synthase 0.91 RR42_RS17170 argininosuccinate synthase — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS06935 3-dehydroquinate synthase 0.15 RALBFv3_RS05180 argininosuccinate synthase — —
Ralstonia solanacearum UW163 0.72 UW163_RS06680 3-dehydroquinate synthase 0.15 UW163_RS08445 argininosuccinate synthase — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS10300 3-dehydroquinate synthase 0.15 RPSI07_RS12120 argininosuccinate synthase — —
Ralstonia solanacearum GMI1000 0.71 RS_RS14880 3-dehydroquinate synthase 0.15 RS_RS12800 argininosuccinate synthase — —
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS02590 3-dehydroquinate synthase 0.15 ABZR87_RS00835 argininosuccinate synthase 0.54 50
Variovorax sp. OAS795 0.63 ABID97_RS23255 3-dehydroquinate synthase 0.15 ABID97_RS21670 argininosuccinate synthase — —
Variovorax sp. SCN45 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.15 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) 0.14 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas putida KT2440 0.58 PP_5078 3-dehydroquinate synthase 0.76 PP_1088 Argininosuccinate synthase — —
Pseudomonas sp. S08-1 0.57 OH686_10015 3-dehydroquinate synthase 0.74 OH686_03930 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.74 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.74 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas simiae WCS417 0.57 PS417_01985 3-dehydroquinate synthase 0.75 PS417_05640 argininosuccinate synthase — —
Dechlorosoma suillum PS 0.57 Dsui_1095 3-dehydroquinate synthase 0.84 Dsui_3248 argininosuccinate synthase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.74 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.80 2
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) 0.75 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) 0.75 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_09385 3-dehydroquinate synthase 0.75 AO356_18325 argininosuccinate synthase — —
Marinobacter adhaerens HP15 0.55 HP15_480 3-dehydroquinate synthase 0.74 HP15_2367 argininosuccinate synthase — —
Shewanella amazonensis SB2B 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) 0.45 Sama_0259 argininosuccinate synthase (RefSeq) 0.62 52
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_12505 3-dehydroquinate synthase 0.74 AO353_04105 argininosuccinate synthase — —
Pseudomonas sp. RS175 0.54 PFR28_05013 3-dehydroquinate synthase 0.75 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0409 3-dehydroquinate synthase 0.74 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0409 3-dehydroquinate synthase 0.74 Psyr_3892 argininosuccinate synthase — —
Pseudomonas stutzeri RCH2 0.54 Psest_3713 3-dehydroquinate synthase 0.76 Psest_3121 argininosuccinate synthase — —
Alteromonas macleodii MIT1002 0.53 MIT1002_00447 3-dehydroquinate synthase 0.46 MIT1002_00468 Argininosuccinate synthase — —
Shewanella oneidensis MR-1 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.83 53
Shewanella sp. ANA-3 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.87 54
Shewanella loihica PV-4 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.45 Shew_0205 argininosuccinate synthase (RefSeq) 0.72 55
Rahnella sp. WP5 0.51 EX31_RS04720 3-dehydroquinate synthase 0.15 EX31_RS13445 argininosuccinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00314 3-dehydroquinate synthase 0.14 OHPLBJKB_00528 Argininosuccinate synthase low > 73
Escherichia coli ECRC62 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase 0.14 BNILDI_01645 argG argininosuccinate synthase 0.91 44
Escherichia coli ECOR27 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase 0.14 NOLOHH_09890 argG argininosuccinate synthase 0.88 43
Escherichia coli BL21 0.51 ECD_03241 3-dehydroquinate synthase 0.14 ECD_03038 argininosuccinate synthetase 0.66 18
Pantoea sp. MT58 0.50 IAI47_01895 3-dehydroquinate synthase 0.47 IAI47_00915 argininosuccinate synthase — —
Escherichia fergusonii Becca 0.50 EFB2_00439 3-dehydroquinate synthase 0.14 EFB2_00651 Argininosuccinate synthase low > 86
Escherichia coli ECOR38 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase 0.14 HEPCGN_16965 argG argininosuccinate synthase 0.82 52
Escherichia coli ECRC101 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase 0.14 MCAODC_08610 argG argininosuccinate synthase 0.85 14
Escherichia coli Nissle 1917 0.50 ECOLIN_RS19360 3-dehydroquinate synthase 0.14 ECOLIN_RS18275 argininosuccinate synthase 0.79 31
Escherichia coli ECRC98 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase 0.14 JDDGAC_21715 argG argininosuccinate synthase 0.89 34
Escherichia coli ECRC102 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase 0.14 NIAGMN_15850 argG argininosuccinate synthase — —
Escherichia coli ECRC100 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase 0.14 OKFHMN_18090 argG argininosuccinate synthase 0.97 16
Escherichia coli ECRC99 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase 0.14 KEDOAH_10060 argG argininosuccinate synthase — —
Escherichia coli BW25113 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.14 b3172 argG argininosuccinate synthase (NCBI) 0.91 23
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_13300 3-dehydroquinate synthase 0.47 CSW01_13370 argininosuccinate synthase low > 62
Serratia liquefaciens MT49 0.49 IAI46_23700 3-dehydroquinate synthase 0.48 IAI46_24505 argininosuccinate synthase 0.82 2
Erwinia tracheiphila SCR3 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase 0.47 LU632_RS19605 argininosuccinate synthase low > 74
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) 0.22 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) low > 40
Rhodospirillum rubrum S1H 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) 0.68 Rru_A3751 Argininosuccinate synthase (NCBI) — —
Lysobacter sp. OAE881 0.42 ABIE51_RS16100 3-dehydroquinate synthase 0.19 ABIE51_RS13405 argininosuccinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04310 3-dehydroquinate synthase 0.19 LRK54_RS02400 argininosuccinate synthase — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS04085 3-dehydroquinate synthase 0.19 LRK55_RS02155 argininosuccinate synthase — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase 0.19 OKGIIK_09465 argG argininosuccinate synthase — —
Caulobacter crescentus NA1000 0.40 CCNA_03104 3-dehydroquinate synthase 0.67 CCNA_00128 argininosuccinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03104 3-dehydroquinate synthase 0.67 CCNA_00128 argininosuccinate synthase low > 67
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19865 3-dehydroquinate synthase 0.68 AMB_RS05720 argininosuccinate synthase — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase 0.41 Synpcc7942_0009 argG argininosuccinate synthase — —
Azospirillum sp. SherDot2 0.39 MPMX19_02639 3-dehydroquinate synthase 0.70 MPMX19_02369 Argininosuccinate synthase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10480 3-dehydroquinate synthase 0.20 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.82 22
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS04175 3-dehydroquinate synthase 0.67 A4249_RS14275 argininosuccinate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.20 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.49 59
Azospirillum brasilense Sp245 0.38 AZOBR_RS03220 3-dehydroquinate synthase 0.70 AZOBR_RS00785 argininosuccinate synthase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS17670 3-dehydroquinate synthase 0.64 ABIE40_RS18150 argininosuccinate synthase — —
Sinorhizobium meliloti 1021 0.38 SMc00696 3-dehydroquinate synthase 0.64 SMc03826 argininosuccinate synthase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c14100 3-dehydroquinate synthase AroB 0.67 PGA1_c34920 argininosuccinate synthase ArgG — —
Rhodopseudomonas palustris CGA009 0.37 TX73_002610 3-dehydroquinate synthase 0.14 TX73_002040 argininosuccinate synthase — —
Agrobacterium fabrum C58 0.36 Atu3625 3-dehydroquinate synthase 0.64 Atu2667 argininosuccinate synthase — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) 0.65 Dshi_3472 Argininosuccinate synthase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) 0.64 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) — —
Mycobacterium tuberculosis H37Rv 0.30 Rv2538c 3-dehydroquinate synthase AroB 0.34 Rv1658 Probable argininosuccinate synthase ArgG — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS05215 3-dehydroquinate synthase 0.19 ABZR88_RS15515 argininosuccinate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13105 3-dehydroquinate synthase 0.18 CA264_06255 argininosuccinate synthase — —
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase 0.17 HMPREF1181_RS03460 argininosuccinate synthase 0.81 14
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0121 3-dehydroquinate synthase 0.19 Echvi_3846 argininosuccinate synthase — —
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase 0.18 HMPREF1078_RS10575 argininosuccinate synthase — —

Not shown: 10 genomes with orthologs for BPHYT_RS17885 only; 12 genomes with orthologs for BPHYT_RS15920 only