Conservation of cofitness between BPHYT_RS06610 and BPHYT_RS14895 in Burkholderia phytofirmans PsJN

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06610 triosephosphate isomerase 1.0 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.76 15
Paraburkholderia graminis OAS925 0.88 ABIE53_001588 triosephosphate isomerase 0.91 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_04564 triosephosphate isomerase 0.95 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS24165 triose-phosphate isomerase 0.90 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.75 3
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05495 triosephosphate isomerase 0.67 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14895 triose-phosphate isomerase 0.70 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10360 triose-phosphate isomerase 0.69 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14320 triose-phosphate isomerase 0.69 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02990 triose-phosphate isomerase 0.69 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum UW163 0.59 UW163_RS10735 triose-phosphate isomerase 0.69 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1979.1 Triosephosphate isomerase (EC 5.3.1.1) 0.15 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0649 triosephosphate isomerase (EC 5.3.1.1) 0.21 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS01940 triose-phosphate isomerase 0.18 ABZR86_RS02230 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_07435 tpiA triose-phosphate isomerase 0.17 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01868 Triosephosphate isomerase 0.53 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS17500 triose-phosphate isomerase 0.16 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rahnella sp. WP5 0.46 EX31_RS14300 triose-phosphate isomerase 0.56 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS08805 triosephosphate isomerase 0.62 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola ME23 0.45 DZA65_RS21555 triose-phosphate isomerase 0.54 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS20510 triose-phosphate isomerase 0.54 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS17720 triose-phosphate isomerase 0.17 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dadantii 3937 0.45 DDA3937_RS00865 triose-phosphate isomerase 0.55 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1196 triosephosphate isomerase 0.25 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.44 BT3929 triosephosphate isomerase (NCBI ptt file) 0.28 BT2186 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) — —
Bacteroides ovatus ATCC 8483 0.44 BACOVA_01155 triose-phosphate isomerase 0.28 BACOVA_03157 3-phosphoshikimate 1-carboxyvinyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS14455 triose-phosphate isomerase 0.25 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS00800 triose-phosphate isomerase 0.52 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS06595 triose-phosphate isomerase 0.26 HMPREF1181_RS09330 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS08270 triose-phosphate isomerase 0.27 HMPREF1058_RS13970 3-phosphoshikimate 1-carboxyvinyltransferase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS19730 tpiA triose-phosphate isomerase 0.51 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4184 triosephosphate isomerase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4184 triosephosphate isomerase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_14890 triose-phosphate isomerase 0.21 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS10795 triose-phosphate isomerase 0.24 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pantoea sp. MT58 0.42 IAI47_00795 triose-phosphate isomerase 0.54 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Serratia liquefaciens MT49 0.42 IAI46_24635 triose-phosphate isomerase 0.54 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase — —
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS12745 triose-phosphate isomerase 0.26 HMPREF1078_RS05635 3-phosphoshikimate 1-carboxyvinyltransferase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4394 triosephosphate isomerase (EC 5.3.1.1) 0.54 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Enterobacter sp. TBS_079 0.42 MPMX20_04548 Triosephosphate isomerase 0.55 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC101 0.41 MCAODC_04310 tpiA triose-phosphate isomerase 0.54 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli BL21 0.41 ECD_03804 triosephosphate isomerase 0.54 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase — —
Escherichia coli BW25113 0.41 b3919 tpiA triosephosphate isomerase (NCBI) 0.54 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Escherichia coli ECRC102 0.41 NIAGMN_11565 tpiA triose-phosphate isomerase 0.54 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECOR27 0.41 NOLOHH_05945 tpiA triose-phosphate isomerase 0.54 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC99 0.41 KEDOAH_14350 tpiA triose-phosphate isomerase 0.54 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC62 0.41 BNILDI_05585 tpiA triose-phosphate isomerase 0.54 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22575 triose-phosphate isomerase 0.55 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase low > 55
Escherichia coli ECRC100 0.41 OKFHMN_13810 tpiA triose-phosphate isomerase 0.54 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04132 Triosephosphate isomerase 0.54 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC98 0.41 JDDGAC_17435 tpiA triose-phosphate isomerase 0.54 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2302 Triosephosphate isomerase (EC 5.3.1.1) 0.55 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) — —
Escherichia coli ECOR38 0.41 HEPCGN_12455 tpiA triose-phosphate isomerase 0.54 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia fergusonii Becca 0.41 EFB2_04699 Triosephosphate isomerase 0.55 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella sp. ANA-3 0.41 Shewana3_1026 triosephosphate isomerase (RefSeq) 0.56 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.41 SO1200 tpiA triosephosphate isomerase (NCBI ptt file) 0.56 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25840 triose-phosphate isomerase 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25840 triose-phosphate isomerase 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas simiae WCS417 0.41 PS417_24000 triosephosphate isomerase 0.21 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase — —
Lysobacter sp. OAE881 0.40 ABIE51_RS08295 triose-phosphate isomerase 0.18 ABIE51_RS12135 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella amazonensis SB2B 0.40 Sama_0957 Triose-phosphate isomerase (RefSeq) 0.56 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Fusobacterium nucleatum SB010 0.40 HUW76_08545 triose-phosphate isomerase 0.21 HUW76_05445 3-phosphoshikimate 1-carboxyvinyltransferase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS27465 triose-phosphate isomerase 0.54 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella loihica PV-4 0.40 Shew_2831 Triose-phosphate isomerase (RefSeq) 0.56 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_13490 triose-phosphate isomerase 0.58 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sinorhizobium meliloti 1021 0.37 SMc01023 triosephosphate isomerase 0.17 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase — —
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_1261 tpiA triosephosphate isomerase 0.15 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS09205 triose-phosphate isomerase 0.15 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014970 triose-phosphate isomerase 0.14 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c20650 triosephosphate isomerase TpiA 0.13 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS06145 triose-phosphate isomerase 0.16 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhizobium sp. OAE497 0.35 ABIE40_RS09645 triose-phosphate isomerase 0.24 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Azospirillum sp. SherDot2 0.35 MPMX19_01241 Triosephosphate isomerase 0.13 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodospirillum rubrum S1H 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) 0.12 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Agrobacterium fabrum C58 0.35 Atu1620 triosephosphate isomerase 0.22 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bifidobacterium breve UCC2003 0.34 BBR_RS15540 triose-phosphate isomerase 0.17 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1677 tpiA triosephosphate isomerase (TIGR) 0.27 DVU0463 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (TIGR) — —
Mycobacterium tuberculosis H37Rv 0.33 Rv1438 Probable triosephosphate isomerase Tpi (TIM) 0.16 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) — —
Caulobacter crescentus NA1000 0.33 CCNA_01970 triosephosphate isomerase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01970 triosephosphate isomerase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_2078 Triose-phosphate isomerase (RefSeq) 0.14 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) 0.14 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0348 Triose-phosphate isomerase (RefSeq) 0.31 DvMF_1748 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —

Not shown: 17 genomes with orthologs for BPHYT_RS06610 only; 5 genomes with orthologs for BPHYT_RS14895 only