Conservation of cofitness between B158DRAFT_0396 and B158DRAFT_1167 in Kangiella aquimarina DSM 16071

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB 1.0 B158DRAFT_1167 Leucyl aminopeptidase 0.38 5
Shewanella sp. ANA-3 0.40 Shewana3_0033 sun protein (RefSeq) 0.62 Shewana3_3006 leucyl aminopeptidase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.40 Sama_0041 sun protein (RefSeq) 0.62 Sama_0795 leucyl aminopeptidase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.39 SO0030 sun sun protein (NCBI ptt file) 0.62 SO1368 pepA-2 cytosol aminopeptidase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.39 Shew_3738 sun protein (RefSeq) 0.62 Shew_0939 leucyl aminopeptidase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 CSW01_12680 cytosol aminopeptidase low > 62
Erwinia tracheiphila SCR3 0.38 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 LU632_RS20855 pepA leucyl aminopeptidase low > 74
Pseudomonas stutzeri RCH2 0.37 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB 0.52 Psest_1235 Leucyl aminopeptidase low > 67
Dickeya dianthicola ME23 0.36 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.61 DZA65_RS02060 leucyl aminopeptidase low > 75
Pantoea sp. MT58 0.36 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 IAI47_16795 leucyl aminopeptidase low > 76
Rahnella sp. WP5 0.36 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 EX31_RS04385 leucyl aminopeptidase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.54 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17 low > 86
Dickeya dianthicola 67-19 0.36 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 HGI48_RS01955 leucyl aminopeptidase low > 71
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.54 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17 low > 86
Dickeya dadantii 3937 0.36 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.61 DDA3937_RS01995 leucyl aminopeptidase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.60 GFF949 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 78
Pseudomonas putida KT2440 0.35 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.52 PP_0980 Probable cytosol aminopeptidase low > 96
Pectobacterium carotovorum WPP14 0.35 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 HER17_RS19450 leucyl aminopeptidase low > 75
Pseudomonas simiae WCS417 0.35 PS417_00085 16S rRNA methyltransferase 0.55 PS417_05165 cytosol aminopeptidase low > 88
Pseudomonas fluorescens SBW25 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.55 PFLU_RS05235 leucyl aminopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.55 PFLU_RS05235 leucyl aminopeptidase 0.25 46
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.60 OHPLBJKB_03776 Cytosol aminopeptidase low > 73
Escherichia coli BW25113 0.35 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.60 b4260 pepA leucyl aminopeptidase (NCBI) 0.24 72
Escherichia coli BL21 0.35 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.60 ECD_04126 multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor low > 61
Escherichia coli ECRC62 0.35 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 BNILDI_07455 pepA leucyl aminopeptidase low > 75
Escherichia coli ECOR27 0.35 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 NOLOHH_04055 pepA leucyl aminopeptidase low > 75
Serratia liquefaciens MT49 0.35 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.61 IAI46_02360 leucyl aminopeptidase low > 86
Escherichia coli ECOR38 0.35 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 HEPCGN_09980 pepA leucyl aminopeptidase 0.67 49
Escherichia coli Nissle 1917 0.35 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 ECOLIN_RS24695 leucyl aminopeptidase low > 55
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.54 Pf6N2E2_5420 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.36 26
Escherichia fergusonii Becca 0.35 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.60 EFB2_04275 Cytosol aminopeptidase low > 86
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_10630 16S rRNA methyltransferase 0.55 AO353_04535 aminopeptidase low > 101
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_11275 16S rRNA methyltransferase 0.55 AO356_17470 aminopeptidase low > 104
Escherichia coli ECRC102 0.35 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 NIAGMN_09640 pepA leucyl aminopeptidase — —
Escherichia coli ECRC98 0.35 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 JDDGAC_15430 pepA leucyl aminopeptidase low > 86
Escherichia coli ECRC100 0.35 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 OKFHMN_11790 pepA leucyl aminopeptidase low > 80
Escherichia coli ECRC99 0.35 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 KEDOAH_16360 pepA leucyl aminopeptidase — —
Pseudomonas sp. RS175 0.35 PFR28_04663 Ribosomal RNA small subunit methyltransferase B 0.54 PFR28_03528 Cytosol aminopeptidase low > 88
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.54 Pf1N1B4_898 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 87
Escherichia coli ECRC101 0.35 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.60 MCAODC_02295 pepA leucyl aminopeptidase low > 87
Marinobacter adhaerens HP15 0.35 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 0.45 HP15_1315 leucyl aminopeptidase — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.54 PfGW456L13_4846 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 87
Klebsiella michiganensis M5al 0.35 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.60 BWI76_RS03040 leucyl aminopeptidase low > 92
Enterobacter sp. TBS_079 0.34 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.60 MPMX20_04118 Cytosol aminopeptidase low > 85
Alteromonas macleodii MIT1002 0.34 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.65 MIT1002_03197 Cytosol aminopeptidase low > 70
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.60 EX28DRAFT_3267 Leucyl aminopeptidase 0.63 67
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.43 OKGIIK_11560 pepB leucyl aminopeptidase low > 52
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.43 ABZR86_RS19105 leucyl aminopeptidase low > 74
Pseudomonas sp. S08-1 0.34 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.54 OH686_07810 Cytosol aminopeptidase PepA 0.57 57
Dechlorosoma suillum PS 0.32 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.58 Dsui_3536 leucyl aminopeptidase low > 51
Acinetobacter radioresistens SK82 0.31 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B 0.42 MPMX26_00157 cytosol aminopeptidase low > 36
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.4741.1 hypothetical protein 0.40 Xcc-8004.4446.1 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 74
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.42 LRK54_RS12375 leucyl aminopeptidase 0.72 4
Rhodanobacter denitrificans MT42 0.30 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.42 LRK55_RS12110 leucyl aminopeptidase low > 63
Lysobacter sp. OAE881 0.30 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.43 ABIE51_RS04475 leucyl aminopeptidase low > 62
Castellaniella sp019104865 MT123 0.29 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.42 ABCV34_RS08295 leucyl aminopeptidase — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.47 ABZR87_RS00150 leucyl aminopeptidase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.36 GFF4309 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 90
Ralstonia solanacearum PSI07 0.28 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 RPSI07_RS12825 leucyl aminopeptidase low > 81
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.46 RALBFv3_RS04550 leucyl aminopeptidase low > 76
Ralstonia solanacearum UW163 0.27 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.46 UW163_RS09120 leucyl aminopeptidase — —
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase 0.48 H281DRAFT_00123 aminopeptidase A. Metallo peptidase. MEROPS family M17 low > 103
Acidovorax sp. GW101-3H11 0.26 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.35 Ac3H11_2399 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 79
Ralstonia solanacearum GMI1000 0.26 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.46 RS_RS12120 cytosol aminopeptidase low > 80
Variovorax sp. OAS795 0.25 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.36 ABID97_RS16580 leucyl aminopeptidase low > 91
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS20450 16S rRNA methyltransferase 0.46 RR42_RS16225 cytosol aminopeptidase low > 128
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_0962 sun sun protein 0.22 Synpcc7942_1190 lap leucyl aminopeptidase low > 38
Azospirillum brasilense Sp245 0.22 AZOBR_RS00235 MFS transporter 0.32 AZOBR_RS16385 aminopeptidase A — —
Azospirillum sp. SherDot2 0.22 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B 0.29 MPMX19_01593 Cytosol aminopeptidase low > 112
Bosea sp. OAE506 0.20 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.28 ABIE41_RS17710 leucyl aminopeptidase low > 77
Rhodopseudomonas palustris CGA009 0.19 TX73_000155 transcription antitermination factor NusB 0.31 TX73_015830 leucyl aminopeptidase low > 86
Sinorhizobium meliloti 1021 0.19 SMc04090 sun protein 0.32 SMc00585 leucyl aminopeptidase low > 103
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.32 CCNA_01763 multifunctional aminopeptidase low > 67
Caulobacter crescentus NA1000 0.19 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.32 CCNA_01763 multifunctional aminopeptidase low > 66
Agrobacterium fabrum C58 0.18 Atu2825 Sun protein 0.30 Atu1110 cytosol aminopeptidase low > 89
Dinoroseobacter shibae DFL-12 0.18 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.29 Dshi_1191 Leucyl aminopeptidase (RefSeq) low > 64
Fusobacterium nucleatum SB010 0.18 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.26 HUW76_01625 leucyl aminopeptidase low > 35
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases 0.27 Ga0059261_0875 Leucyl aminopeptidase low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.31 A4249_RS06730 leucyl aminopeptidase — —
Desulfovibrio vulgaris Hildenborough JW710 0.14 DVU3363 sun sun protein (TIGR) 0.31 DVU0415 pepA cytosol aminopeptidase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.14 DvMF_2042 NusB/RsmB/TIM44 (RefSeq) 0.32 DvMF_1538 Leucyl aminopeptidase (RefSeq) low > 51
Mycobacterium tuberculosis H37Rv 0.12 Rv1407 Probable Fmu protein (sun protein) 0.23 Rv2213 Probable aminopeptidase PepB low > 58

Not shown: 2 genomes with orthologs for B158DRAFT_0396 only; 6 genomes with orthologs for B158DRAFT_1167 only